FFCP PHASE1:Hg19::chr2:55253868..55253887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQC3 | |UniProt=Q9NQC3 | ||
|association_with_transcript=-76bp_to_AF063601_5end | |association_with_transcript=-76bp_to_AF063601_5end | ||
|cluster_id=chr2:55253868..55253887,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_28_at_RTN4_5end | |description=CAGE_peak_28_at_RTN4_5end | ||
|id=chr2:55253868..55253887,- | |id=chr2:55253868..55253887,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.71e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.40e-09,3;CL:0000047,3.10e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.39e-09;3!UBERON:0003057;5.39e-09;3!UBERON:0006215;1.14e-08;3!UBERON:0006601;2.18e-08;82!UBERON:0005425;4.08e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.56e-38!57;UBERON:0005068!2.56e-38!57;UBERON:0006241!2.56e-38!57;UBERON:0007135!2.56e-38!57;UBERON:0001017!2.76e-36!82;UBERON:0005743!6.87e-35!86;UBERON:0000073!8.80e-35!94;UBERON:0001016!8.80e-35!94;UBERON:0002616!5.86e-32!59;UBERON:0000955!3.32e-30!69;UBERON:0006238!3.32e-30!69;UBERON:0002780!3.24e-29!41;UBERON:0001890!3.24e-29!41;UBERON:0006240!3.24e-29!41;UBERON:0002020!9.48e-29!34;UBERON:0003528!9.48e-29!34;UBERON:0001893!2.03e-28!34;UBERON:0003080!3.22e-28!42;UBERON:0002791!2.24e-27!33;UBERON:0001869!3.38e-26!32;UBERON:0002346!3.83e-26!90;UBERON:0003075!4.95e-26!86;UBERON:0007284!4.95e-26!86;UBERON:0007023!1.77e-21!115;UBERON:0003056!9.90e-20!61;UBERON:0000956!8.69e-19!25;UBERON:0000203!8.69e-19!25;UBERON:0001950!1.31e-18!20;UBERON:0002619!1.49e-18!22;UBERON:0000924!1.66e-16!173;UBERON:0006601!1.66e-16!173;UBERON:0004121!3.98e-16!169;UBERON:0000153!9.88e-16!129;UBERON:0007811!9.88e-16!129;UBERON:0000033!2.92e-15!123;UBERON:0002308!8.82e-12!9;UBERON:0000125!8.82e-12!9;UBERON:0003076!4.92e-11!15;UBERON:0003057!4.92e-11!15;UBERON:0009663!2.45e-09!7;UBERON:0002420!5.39e-09!9;UBERON:0007245!5.39e-09!9;UBERON:0010009!5.39e-09!9;UBERON:0010011!5.39e-09!9;UBERON:0000454!5.39e-09!9;UBERON:0004732!7.66e-09!13;UBERON:0000200!4.89e-08!6;UBERON:0002298!7.87e-08!8;UBERON:0004733!8.44e-08!12;UBERON:0002028!8.44e-08!12;UBERON:0007277!8.44e-08!12;UBERON:0001872!6.81e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.18e-37;34!UBERON:0002020;2.18e-37;34!UBERON:0002791;3.40e-35;32!UBERON:0001869;2.93e-31;32!UBERON:0002619;1.43e-29;22!UBERON:0001893;2.29e-29;34!UBERON:0001950;5.39e-27;20!UBERON:0000956;6.39e-26;25!UBERON:0000203;6.39e-26;25!UBERON:0000125;3.89e-23;9!UBERON:0002308;3.89e-23;9!UBERON:0000073;2.88e-21;53!UBERON:0002616;2.88e-21;53!UBERON:0002780;4.93e-21;41!UBERON:0001890;4.93e-21;41!UBERON:0002021;1.83e-19;5!UBERON:0000988;2.58e-18;3!UBERON:0001016;1.21e-17;83!UBERON:0000955;7.36e-17;68!UBERON:0001017;2.51e-16;75!UBERON:0002680;4.12e-16;9!UBERON:0001895;4.12e-16;9!UBERON:0004732;1.14e-15;13!UBERON:0009663;1.09e-13;7!UBERON:0002148;6.49e-13;2!UBERON:0006331;6.49e-13;2!UBERON:0009662;6.49e-13;2!UBERON:0004733;4.88e-12;12!UBERON:0002028;4.88e-12;12!UBERON:0001872;1.52e-11;5!UBERON:0002420;1.12e-10;9!UBERON:0007245;1.12e-10;9!UBERON:0010009;1.12e-10;9!UBERON:0010011;1.12e-10;9!UBERON:0000454;1.12e-10;9!UBERON:0002298;2.03e-09;6!UBERON:0002114;4.78e-09;2!UBERON:0002240;5.39e-09;3!UBERON:0005174;5.39e-09;3!UBERON:0001137;5.39e-09;3!UBERON:0005383;1.14e-08;3!UBERON:0005382;1.14e-08;3!UBERON:0011216;1.90e-07;132!UBERON:0001874;4.08e-07;1!UBERON:0002038;4.08e-07;1!UBERON:0000941;4.08e-07;1!UBERON:0001785;4.08e-07;1!UBERON:0002464;4.08e-07;1!UBERON:0004904;4.08e-07;1!UBERON:0001021;4.08e-07;1!UBERON:0009661;4.08e-07;1!UBERON:0002950;4.08e-07;1!UBERON:0001891;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.80e-46,56;UBERON:0005068,5.80e-46,56;UBERON:0006241,5.80e-46,56;UBERON:0007135,5.80e-46,56;UBERON:0003528,1.04e-45,34;UBERON:0002020,1.04e-45,34;UBERON:0001017,2.46e-43,81;UBERON:0001016,7.68e-42,89;UBERON:0000073,8.65e-40,53;UBERON:0002616,8.65e-40,53;UBERON:0002791,1.58e-37,32;UBERON:0001893,3.32e-35,34;UBERON:0003075,3.94e-33,82;UBERON:0007284,3.94e-33,82;UBERON:0000955,4.78e-33,68;UBERON:0006238,4.78e-33,68;UBERON:0001869,1.51e-32,32;UBERON:0002346,2.18e-31,86;UBERON:0002619,1.85e-29,22;UBERON:0002780,8.09e-29,41;UBERON:0001890,8.09e-29,41;UBERON:0003080,8.09e-29,41;UBERON:0006240,8.09e-29,41;UBERON:0001950,6.42e-27,20;UBERON:0000956,8.03e-26,25;UBERON:0000203,8.03e-26,25;UBERON:0010371,3.43e-25,104;UBERON:0000125,2.13e-23,9;UBERON:0002308,2.13e-23,9;UBERON:0003056,3.46e-21,61;UBERON:0004121,1.31e-19,171;UBERON:0000924,1.31e-19,171;UBERON:0006601,1.31e-19,171;UBERON:0002021,1.79e-19,5;UBERON:0010314,7.00e-19,132;UBERON:0003076,1.30e-18,15;UBERON:0003057,1.30e-18,15;UBERON:0000988,1.98e-18,3;UBERON:0011216,6.05e-18,223;UBERON:0002680,2.86e-16,9;UBERON:0001895,2.86e-16,9;UBERON:0010092,2.86e-16,9;UBERON:0004732,8.88e-16,13;UBERON:0007023,1.07e-14,114;UBERON:0009663,9.00e-14,7;UBERON:0002148,3.67e-13,2;UBERON:0006331,3.67e-13,2;UBERON:0009662,3.67e-13,2;UBERON:0004733,3.72e-12,12;UBERON:0002028,3.72e-12,12;UBERON:0007277,3.72e-12,12;UBERON:0000025,1.64e-11,192;UBERON:0001872,2.38e-11,5;UBERON:0002420,9.62e-11,9;UBERON:0007245,9.62e-11,9;UBERON:0010009,9.62e-11,9;UBERON:0010011,9.62e-11,9;UBERON:0000454,9.62e-11,9;UBERON:0002298,1.78e-09,6;UBERON:0002240,4.42e-09,3;UBERON:0005174,4.42e-09,3;UBERON:0001137,4.42e-09,3;UBERON:0002114,6.59e-09,2;UBERON:0005383,1.24e-08,3;UBERON:0005382,1.24e-08,3;UBERON:0004111,2.82e-08,240;UBERON:0002038,2.52e-07,1;UBERON:0009661,2.52e-07,1;UBERON:0002950,2.52e-07,1;UBERON:0001891,2.52e-07,1;UBERON:0009616,2.52e-07,1;UBERON:0010286,2.52e-07,1;UBERON:0000941,4.60e-07,1;UBERON:0001785,4.60e-07,1;UBERON:0002464,4.60e-07,1;UBERON:0004904,4.60e-07,1;UBERON:0001021,4.60e-07,1;UBERON:0003902,4.60e-07,1;UBERON:0005425,4.60e-07,1;UBERON:0001874,6.20e-07,1 | |||
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| ||
|short_description=p28@RTN4 | |short_description=p28@RTN4 | ||
}} | }} |
Latest revision as of 16:46, 17 September 2015
Short description: | p28@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_RTN4_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -76bp_to_AF063601_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.40e-09 | 3 |
neuronal stem cell | 3.10e-07 | 8 |