FFCP PHASE1:Hg19::chr20:9494987..9495027,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:9494987..9495027,+ to FFCP PHASE1:Hg19::chr20:9494987..9495027,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=0bp_to_ENST00000246070,NM_001199897,NM_012261_5end | |||
|cluster_id=chr20:9494987..9495027,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_LAMP5_5end | |||
|id=chr20:9494987..9495027,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-11;82!UBERON:0010122;2.50e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.91e-71!57;UBERON:0005068!4.91e-71!57;UBERON:0006241!4.91e-71!57;UBERON:0007135!4.91e-71!57;UBERON:0002616!2.66e-58!59;UBERON:0002780!2.25e-55!41;UBERON:0001890!2.25e-55!41;UBERON:0006240!2.25e-55!41;UBERON:0001893!8.22e-55!34;UBERON:0001869!1.31e-54!32;UBERON:0003080!7.29e-54!42;UBERON:0001017!2.95e-53!82;UBERON:0000955!2.97e-53!69;UBERON:0006238!2.97e-53!69;UBERON:0005743!1.13e-52!86;UBERON:0002791!1.60e-52!33;UBERON:0000073!3.99e-51!94;UBERON:0001016!3.99e-51!94;UBERON:0002020!7.80e-51!34;UBERON:0003528!7.80e-51!34;UBERON:0003075!1.71e-50!86;UBERON:0007284!1.71e-50!86;UBERON:0002346!1.04e-47!90;UBERON:0002619!6.54e-43!22;UBERON:0003056!3.30e-39!61;UBERON:0001950!7.56e-38!20;UBERON:0000956!2.89e-37!25;UBERON:0000203!2.89e-37!25;UBERON:0007023!5.26e-37!115;UBERON:0000033!8.37e-30!123;UBERON:0000153!7.07e-28!129;UBERON:0007811!7.07e-28!129;UBERON:0004121!1.71e-25!169;UBERON:0000924!1.31e-24!173;UBERON:0006601!1.31e-24!173;UBERON:0002420!7.58e-20!9;UBERON:0007245!7.58e-20!9;UBERON:0010009!7.58e-20!9;UBERON:0010011!7.58e-20!9;UBERON:0000454!7.58e-20!9;UBERON:0003076!1.76e-17!15;UBERON:0003057!1.76e-17!15;UBERON:0001871!1.64e-16!7;UBERON:0000200!3.40e-16!6;UBERON:0002308!9.14e-15!9;UBERON:0000125!9.14e-15!9;UBERON:0000349!9.77e-15!5;UBERON:0009663!1.06e-14!7;UBERON:0000025!1.25e-14!194;UBERON:0001872!3.12e-13!5;UBERON:0000369!2.29e-12!4;UBERON:0002435!2.29e-12!4;UBERON:0000204!2.29e-12!4;UBERON:0010082!2.29e-12!4;UBERON:0004111!7.56e-12!241;UBERON:0004733!9.40e-12!12;UBERON:0002028!9.40e-12!12;UBERON:0007277!9.40e-12!12;UBERON:0004732!9.64e-11!13;UBERON:0005383!1.05e-09!3;UBERON:0005382!1.05e-09!3;UBERON:0000477!1.86e-09!286;UBERON:0000064!3.25e-09!219;UBERON:0002680!4.00e-09!9;UBERON:0001895!4.00e-09!9;UBERON:0010092!4.00e-09!9;UBERON:0002771!4.57e-09!3;UBERON:0002240!4.32e-08!3;UBERON:0000483!2.80e-07!309;UBERON:0000119!4.17e-07!312;UBERON:0001873!5.32e-07!2;UBERON:0010122!5.32e-07!2;UBERON:0001876!6.29e-07!2;UBERON:0001954!8.30e-07!2;UBERON:0003022!8.30e-07!2;UBERON:0002421!8.30e-07!2;UBERON:0002600!8.30e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.32e-68;32!UBERON:0002791;2.84e-64;32!UBERON:0001893;1.19e-61;34!UBERON:0003528;2.59e-58;34!UBERON:0002020;2.59e-58;34!UBERON:0002619;1.19e-56;22!UBERON:0002780;3.01e-53;41!UBERON:0001890;3.01e-53;41!UBERON:0000956;1.34e-49;25!UBERON:0000203;1.34e-49;25!UBERON:0001950;9.38e-49;20!UBERON:0000073;3.10e-38;53!UBERON:0002616;3.10e-38;53!UBERON:0002420;2.40e-31;9!UBERON:0007245;2.40e-31;9!UBERON:0010009;2.40e-31;9!UBERON:0010011;2.40e-31;9!UBERON:0000454;2.40e-31;9!UBERON:0000955;1.85e-28;68!UBERON:0001017;6.87e-26;75!UBERON:0000200;4.29e-25;6!UBERON:0009663;5.07e-23;7!UBERON:0000349;8.76e-23;5!UBERON:0001871;3.61e-22;6!UBERON:0001016;2.26e-20;83!UBERON:0000369;5.85e-19;4!UBERON:0002435;5.85e-19;4!UBERON:0000204;5.85e-19;4!UBERON:0000125;9.32e-18;9!UBERON:0002308;9.32e-18;9!UBERON:0005383;1.14e-14;3!UBERON:0005382;1.14e-14;3!UBERON:0001872;1.18e-13;5!UBERON:0001870;2.24e-13;3!UBERON:0007023;1.91e-10;114!UBERON:0001873;2.50e-10;2!UBERON:0001876;3.27e-10;2!UBERON:0001954;5.09e-10;2!UBERON:0003022;5.09e-10;2!UBERON:0002421;5.09e-10;2!UBERON:0002600;5.09e-10;2!UBERON:0002771;8.24e-10;2!UBERON:0001875;9.19e-10;2!UBERON:0006514;9.19e-10;2!UBERON:0001897;1.99e-09;2!UBERON:0010225;1.99e-09;2!UBERON:0002702;2.52e-09;2!UBERON:0011216;4.45e-09;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.03e-76,32;UBERON:0002780,7.02e-75,41;UBERON:0001890,7.02e-75,41;UBERON:0003080,7.02e-75,41;UBERON:0006240,7.02e-75,41;UBERON:0001893,5.65e-72,34;UBERON:0002791,1.14e-70,32;UBERON:0001049,3.79e-70,56;UBERON:0005068,3.79e-70,56;UBERON:0006241,3.79e-70,56;UBERON:0007135,3.79e-70,56;UBERON:0000073,8.92e-70,53;UBERON:0002616,8.92e-70,53;UBERON:0003528,2.73e-66,34;UBERON:0002020,2.73e-66,34;UBERON:0000955,1.14e-59,68;UBERON:0006238,1.14e-59,68;UBERON:0002619,1.30e-56,22;UBERON:0001017,7.57e-56,81;UBERON:0001016,1.33e-49,89;UBERON:0000956,1.44e-49,25;UBERON:0000203,1.44e-49,25;UBERON:0001950,1.02e-48,20;UBERON:0003056,1.62e-48,61;UBERON:0003075,8.17e-46,82;UBERON:0007284,8.17e-46,82;UBERON:0002346,2.32e-43,86;UBERON:0010371,1.23e-34,104;UBERON:0007023,7.46e-34,114;UBERON:0002420,2.55e-31,9;UBERON:0007245,2.55e-31,9;UBERON:0010009,2.55e-31,9;UBERON:0010011,2.55e-31,9;UBERON:0000454,2.55e-31,9;UBERON:0010314,1.03e-27,132;UBERON:0000200,3.87e-25,6;UBERON:0009663,5.37e-23,7;UBERON:0000349,8.77e-23,5;UBERON:0004121,1.89e-22,171;UBERON:0000924,1.89e-22,171;UBERON:0006601,1.89e-22,171;UBERON:0001871,3.55e-22,6;UBERON:0000369,5.85e-19,4;UBERON:0002435,5.85e-19,4;UBERON:0000204,5.85e-19,4;UBERON:0010082,5.85e-19,4;UBERON:0000125,9.74e-18,9;UBERON:0002308,9.74e-18,9;UBERON:0011216,1.47e-16,223;UBERON:0000025,1.97e-15,192;UBERON:0005383,1.14e-14,3;UBERON:0005382,1.14e-14,3;UBERON:0001872,1.24e-13,5;UBERON:0001870,1.93e-13,3;UBERON:0004111,7.71e-13,240;UBERON:0001873,2.50e-10,2;UBERON:0010122,2.50e-10,2;UBERON:0001876,3.27e-10,2;UBERON:0001954,5.09e-10,2;UBERON:0003022,5.09e-10,2;UBERON:0002421,5.09e-10,2;UBERON:0002600,5.09e-10,2;UBERON:0002771,7.56e-10,2;UBERON:0001875,9.81e-10,2;UBERON:0006514,9.81e-10,2;UBERON:0001897,1.65e-09,2;UBERON:0010225,1.65e-09,2;UBERON:0002702,2.13e-09,2;UBERON:0000483,4.96e-07,306;UBERON:0000119,6.77e-07,309 | |||
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| ||
|short_description=p4@LAMP5 | |||
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Latest revision as of 17:28, 17 September 2015
Short description: | p4@LAMP5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000246070, NM_001199897, NM_012261_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data