FFCP PHASE1:Hg19::chr10:26505387..26505457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2572 | |EntrezGene=2572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |HGNC=4093 | ||
|TSSclassifier=strong | |||
|UniProt=Q05329 | |UniProt=Q05329 | ||
|association_with_transcript=-136bp_to_ENST00000259271_5end | |association_with_transcript=-136bp_to_ENST00000259271_5end | ||
|cluster_id=chr10:26505387..26505457,+ | |||
|coexpression_cluster_id=C1309 | |coexpression_cluster_id=C1309 | ||
|description=CAGE_peak_2_at_GAD2_5end | |description=CAGE_peak_2_at_GAD2_5end | ||
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|ontology_enrichment_celltype=CL:0000047!6.58e-08!8;CL:0000064!5.54e-07!3;CL:0005012!5.54e-07!3;CL:0000067!5.54e-07!3;CL:0002304!5.54e-07!3;CL:0002322!6.42e-07!5 | |ontology_enrichment_celltype=CL:0000047!6.58e-08!8;CL:0000064!5.54e-07!3;CL:0005012!5.54e-07!3;CL:0000067!5.54e-07!3;CL:0002304!5.54e-07!3;CL:0002322!6.42e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.64e-07;2 | |ontology_enrichment_celltype_v019=CL:0000047;4.64e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.16e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.23e-15;82!UBERON:0006215;3.14e-09;3!UBERON:0010122;6.27e-08;2 | |ontology_enrichment_development_v019=UBERON:0006601;3.23e-15;82!UBERON:0006215;3.14e-09;3!UBERON:0010122;6.27e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.33e-100!57;UBERON:0005068!6.33e-100!57;UBERON:0006241!6.33e-100!57;UBERON:0007135!6.33e-100!57;UBERON:0001017!4.68e-97!82;UBERON:0005743!5.66e-95!86;UBERON:0002616!8.47e-85!59;UBERON:0000073!1.43e-84!94;UBERON:0001016!1.43e-84!94;UBERON:0002780!4.97e-84!41;UBERON:0001890!4.97e-84!41;UBERON:0006240!4.97e-84!41;UBERON:0003080!8.69e-82!42;UBERON:0003075!3.36e-81!86;UBERON:0007284!3.36e-81!86;UBERON:0000955!8.44e-80!69;UBERON:0006238!8.44e-80!69;UBERON:0001893!3.31e-78!34;UBERON:0002020!6.50e-78!34;UBERON:0003528!6.50e-78!34;UBERON:0002346!6.52e-77!90;UBERON:0002791!7.64e-76!33;UBERON:0001869!2.13e-74!32;UBERON:0003056!9.54e-68!61;UBERON:0000956!1.47e-57!25;UBERON:0000203!1.47e-57!25;UBERON:0002619!1.84e-52!22;UBERON:0000033!3.64e-50!123;UBERON:0001950!3.13e-48!20;UBERON:0000153!3.92e-47!129;UBERON:0007811!3.92e-47!129;UBERON:0004121!9.30e-47!169;UBERON:0000924!2.69e-45!173;UBERON:0006601!2.69e-45!173;UBERON:0007023!1.50e-44!115;UBERON:0002420!1.12e-21!9;UBERON:0007245!1.12e-21!9;UBERON:0010009!1.12e-21!9;UBERON:0010011!1.12e-21!9;UBERON:0000454!1.12e-21!9;UBERON:0002308!3.21e-21!9;UBERON:0000125!3.21e-21!9;UBERON:0000025!1.79e-19!194;UBERON:0001871!4.94e-19!7;UBERON:0003076!8.65e-19!15;UBERON:0003057!8.65e-19!15;UBERON:0009663!2.29e-17!7;UBERON:0000200!1.16e-14!6;UBERON:0000064!8.09e-14!219;UBERON:0004733!1.67e-13!12;UBERON:0002028!1.67e-13!12;UBERON:0007277!1.67e-13!12;UBERON:0004111!4.61e-13!241;UBERON:0001872!7.53e-13!5;UBERON:0002021!1.08e-12!5;UBERON:0002298!1.55e-12!8;UBERON:0000349!1.66e-12!5;UBERON:0004732!2.50e-12!13;UBERON:0000483!2.75e-12!309;UBERON:0000119!4.99e-12!312;UBERON:0000477!1.48e-11!286;UBERON:0000369!2.38e-11!4;UBERON:0002435!2.38e-11!4;UBERON:0000204!2.38e-11!4;UBERON:0010082!2.38e-11!4;UBERON:0000475!1.63e-10!365;UBERON:0005383!5.64e-09!3;UBERON:0005382!5.64e-09!3;UBERON:0000922!7.74e-09!612;UBERON:0002680!1.48e-08!9;UBERON:0001895!1.48e-08!9;UBERON:0010092!1.48e-08!9;UBERON:0001894!2.92e-08!7;UBERON:0006222!2.92e-08!7;UBERON:0000062!4.67e-08!511;UBERON:0002771!6.24e-08!3;UBERON:0000988!2.49e-07!3;UBERON:0006331!2.85e-07!3;UBERON:0002240!2.92e-07!3;UBERON:0001896!4.45e-07!3;UBERON:0005290!4.45e-07!3;UBERON:0010096!4.45e-07!3;UBERON:0001778!5.54e-07!3;UBERON:0001775!5.54e-07!3;UBERON:0000468!8.40e-07!659 | |ontology_enrichment_uberon=UBERON:0001049!6.33e-100!57;UBERON:0005068!6.33e-100!57;UBERON:0006241!6.33e-100!57;UBERON:0007135!6.33e-100!57;UBERON:0001017!4.68e-97!82;UBERON:0005743!5.66e-95!86;UBERON:0002616!8.47e-85!59;UBERON:0000073!1.43e-84!94;UBERON:0001016!1.43e-84!94;UBERON:0002780!4.97e-84!41;UBERON:0001890!4.97e-84!41;UBERON:0006240!4.97e-84!41;UBERON:0003080!8.69e-82!42;UBERON:0003075!3.36e-81!86;UBERON:0007284!3.36e-81!86;UBERON:0000955!8.44e-80!69;UBERON:0006238!8.44e-80!69;UBERON:0001893!3.31e-78!34;UBERON:0002020!6.50e-78!34;UBERON:0003528!6.50e-78!34;UBERON:0002346!6.52e-77!90;UBERON:0002791!7.64e-76!33;UBERON:0001869!2.13e-74!32;UBERON:0003056!9.54e-68!61;UBERON:0000956!1.47e-57!25;UBERON:0000203!1.47e-57!25;UBERON:0002619!1.84e-52!22;UBERON:0000033!3.64e-50!123;UBERON:0001950!3.13e-48!20;UBERON:0000153!3.92e-47!129;UBERON:0007811!3.92e-47!129;UBERON:0004121!9.30e-47!169;UBERON:0000924!2.69e-45!173;UBERON:0006601!2.69e-45!173;UBERON:0007023!1.50e-44!115;UBERON:0002420!1.12e-21!9;UBERON:0007245!1.12e-21!9;UBERON:0010009!1.12e-21!9;UBERON:0010011!1.12e-21!9;UBERON:0000454!1.12e-21!9;UBERON:0002308!3.21e-21!9;UBERON:0000125!3.21e-21!9;UBERON:0000025!1.79e-19!194;UBERON:0001871!4.94e-19!7;UBERON:0003076!8.65e-19!15;UBERON:0003057!8.65e-19!15;UBERON:0009663!2.29e-17!7;UBERON:0000200!1.16e-14!6;UBERON:0000064!8.09e-14!219;UBERON:0004733!1.67e-13!12;UBERON:0002028!1.67e-13!12;UBERON:0007277!1.67e-13!12;UBERON:0004111!4.61e-13!241;UBERON:0001872!7.53e-13!5;UBERON:0002021!1.08e-12!5;UBERON:0002298!1.55e-12!8;UBERON:0000349!1.66e-12!5;UBERON:0004732!2.50e-12!13;UBERON:0000483!2.75e-12!309;UBERON:0000119!4.99e-12!312;UBERON:0000477!1.48e-11!286;UBERON:0000369!2.38e-11!4;UBERON:0002435!2.38e-11!4;UBERON:0000204!2.38e-11!4;UBERON:0010082!2.38e-11!4;UBERON:0000475!1.63e-10!365;UBERON:0005383!5.64e-09!3;UBERON:0005382!5.64e-09!3;UBERON:0000922!7.74e-09!612;UBERON:0002680!1.48e-08!9;UBERON:0001895!1.48e-08!9;UBERON:0010092!1.48e-08!9;UBERON:0001894!2.92e-08!7;UBERON:0006222!2.92e-08!7;UBERON:0000062!4.67e-08!511;UBERON:0002771!6.24e-08!3;UBERON:0000988!2.49e-07!3;UBERON:0006331!2.85e-07!3;UBERON:0002240!2.92e-07!3;UBERON:0001896!4.45e-07!3;UBERON:0005290!4.45e-07!3;UBERON:0010096!4.45e-07!3;UBERON:0001778!5.54e-07!3;UBERON:0001775!5.54e-07!3;UBERON:0000468!8.40e-07!659 | ||
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|short_description=p2@GAD2 | |short_description=p2@GAD2 | ||
}} | }} |
Latest revision as of 17:38, 17 September 2015
Short description: | p2@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAD2_5end |
Coexpression cluster: | C1309_putamen_parietal_caudate_temporal_duodenum_Neurons_occipital |
Association with transcript: | -136bp_to_ENST00000259271_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q05329 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.16e-10 | 8 |