FFCP PHASE1:Hg19::chr10:26505670..26505692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2572 | |EntrezGene=2572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |HGNC=4093 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VZ31 | |UniProt=Q5VZ31 | ||
|association_with_transcript=8bp_to_ENST00000428517_5end | |association_with_transcript=8bp_to_ENST00000428517_5end | ||
|cluster_id=chr10:26505670..26505692,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_3_at_GAD2_5end | |description=CAGE_peak_3_at_GAD2_5end | ||
|id=chr10:26505670..26505692,+ | |id=chr10:26505670..26505692,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.93e-08!5 | |ontology_enrichment_celltype=CL:0002322!2.93e-08!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.55e-20;82!UBERON:0006215;4.27e-10;3!UBERON:0006241;2.43e-09;3!UBERON:0003057;2.43e-09;3!UBERON:0010122;4.05e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;9.49e-73;32!UBERON:0003528;7.44e-70;34!UBERON:0002020;7.44e-70;34!UBERON:0001893;1.18e-69;34!UBERON:0002791;2.79e-68;32!UBERON:0002619;1.49e-67;22!UBERON:0002780;2.36e-65;41!UBERON:0001890;2.36e-65;41!UBERON:0001950;6.38e-62;20!UBERON:0000073;1.61e-60;53!UBERON:0002616;1.61e-60;53!UBERON:0000956;5.21e-59;25!UBERON:0000203;5.21e-59;25!UBERON:0001017;6.55e-42;75!UBERON:0000955;2.16e-41;68!UBERON:0001016;8.22e-34;83!UBERON:0002420;3.93e-23;9!UBERON:0007245;3.93e-23;9!UBERON:0010009;3.93e-23;9!UBERON:0010011;3.93e-23;9!UBERON:0000454;3.93e-23;9!UBERON:0000125;4.53e-23;9!UBERON:0002308;4.53e-23;9!UBERON:0001871;4.77e-21;6!UBERON:0004733;2.54e-19;12!UBERON:0002028;2.54e-19;12!UBERON:0000200;5.36e-19;6!UBERON:0002298;5.71e-18;6!UBERON:0004732;1.06e-17;13!UBERON:0009663;2.27e-17;7!UBERON:0000349;3.31e-16;5!UBERON:0001872;3.47e-16;5!UBERON:0002021;9.88e-16;5!UBERON:0007023;1.96e-15;114!UBERON:0000369;1.51e-14;4!UBERON:0002435;1.51e-14;4!UBERON:0000204;1.51e-14;4!UBERON:0011216;2.21e-13;132!UBERON:0002680;5.70e-12;9!UBERON:0001895;5.70e-12;9!UBERON:0005383;2.30e-11;3!UBERON:0005382;2.30e-11;3!UBERON:0001894;3.04e-11;7!UBERON:0001870;1.24e-10;3!UBERON:0000988;6.39e-10;3!UBERON:0001896;9.23e-10;3!UBERON:0005290;9.23e-10;3!UBERON:0002240;2.43e-09;3!UBERON:0005174;2.43e-09;3!UBERON:0001137;2.43e-09;3!UBERON:0010314;2.58e-09;132!UBERON:0001873;4.05e-08;2!UBERON:0001897;1.22e-07;2!UBERON:0010225;1.22e-07;2!UBERON:0001875;1.44e-07;2!UBERON:0006514;1.44e-07;2!UBERON:0002702;1.53e-07;2!UBERON:0001876;1.58e-07;2!UBERON:0002148;1.86e-07;2!UBERON:0006331;1.86e-07;2!UBERON:0009662;1.86e-07;2!UBERON:0001954;3.55e-07;2!UBERON:0003022;3.55e-07;2!UBERON:0002421;3.55e-07;2!UBERON:0002600;3.55e-07;2!UBERON:0002771;3.90e-07;2!UBERON:0000007;9.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.21e-118,56;UBERON:0005068,5.21e-118,56;UBERON:0006241,5.21e-118,56;UBERON:0007135,5.21e-118,56;UBERON:0000073,7.93e-110,53;UBERON:0002616,7.93e-110,53;UBERON:0001017,6.73e-100,81;UBERON:0000955,1.82e-94,68;UBERON:0006238,1.82e-94,68;UBERON:0002780,7.62e-91,41;UBERON:0001890,7.62e-91,41;UBERON:0003080,7.62e-91,41;UBERON:0006240,7.62e-91,41;UBERON:0001016,6.91e-89,89;UBERON:0003528,2.13e-81,34;UBERON:0002020,2.13e-81,34;UBERON:0001869,3.24e-81,32;UBERON:0001893,3.54e-81,34;UBERON:0003075,2.69e-77,82;UBERON:0007284,2.69e-77,82;UBERON:0002791,1.79e-75,32;UBERON:0002346,3.42e-73,86;UBERON:0002619,1.06e-67,22;UBERON:0001950,4.54e-62,20;UBERON:0010371,3.19e-61,104;UBERON:0000956,3.86e-59,25;UBERON:0000203,3.86e-59,25;UBERON:0003056,2.33e-58,61;UBERON:0007023,1.49e-48,114;UBERON:0010314,4.48e-48,132;UBERON:0004121,8.76e-43,171;UBERON:0000924,8.76e-43,171;UBERON:0006601,8.76e-43,171;UBERON:0011216,9.49e-33,223;UBERON:0000025,8.27e-28,192;UBERON:0003076,1.10e-26,15;UBERON:0003057,1.10e-26,15;UBERON:0002420,3.94e-23,9;UBERON:0007245,3.94e-23,9;UBERON:0010009,3.94e-23,9;UBERON:0010011,3.94e-23,9;UBERON:0000454,3.94e-23,9;UBERON:0000125,4.29e-23,9;UBERON:0002308,4.29e-23,9;UBERON:0001871,3.91e-21,6;UBERON:0004111,6.86e-20,240;UBERON:0004733,2.25e-19,12;UBERON:0002028,2.25e-19,12;UBERON:0007277,2.25e-19,12;UBERON:0000200,4.38e-19,6;UBERON:0002298,5.22e-18,6;UBERON:0004732,9.51e-18,13;UBERON:0009663,2.12e-17,7;UBERON:0001872,3.59e-16,5;UBERON:0000349,3.59e-16,5;UBERON:0002021,8.35e-16,5;UBERON:0000483,8.57e-15,306;UBERON:0000369,1.51e-14,4;UBERON:0002435,1.51e-14,4;UBERON:0000204,1.51e-14,4;UBERON:0010082,1.51e-14,4;UBERON:0000119,1.56e-14,309;UBERON:0002680,5.06e-12,9;UBERON:0001895,5.06e-12,9;UBERON:0010092,5.06e-12,9;UBERON:0005383,2.31e-11,3;UBERON:0005382,2.31e-11,3;UBERON:0001894,3.36e-11,7;UBERON:0006222,3.36e-11,7;UBERON:0001870,1.22e-10,3;UBERON:0000988,5.74e-10,3;UBERON:0001896,9.38e-10,3;UBERON:0005290,9.38e-10,3;UBERON:0010096,9.38e-10,3;UBERON:0002240,2.54e-09,3;UBERON:0005174,2.54e-09,3;UBERON:0001137,2.54e-09,3;UBERON:0000922,8.57e-09,592;UBERON:0000923,3.58e-08,560;UBERON:0010316,3.58e-08,560;UBERON:0005291,3.58e-08,560;UBERON:0006598,3.58e-08,560;UBERON:0010317,3.58e-08,560;UBERON:0002532,3.58e-08,560;UBERON:0001873,4.05e-08,2;UBERON:0010122,4.05e-08,2;UBERON:0002050,5.11e-08,564;UBERON:0005423,5.70e-08,581;UBERON:0001897,1.17e-07,2;UBERON:0010225,1.17e-07,2;UBERON:0001875,1.33e-07,2;UBERON:0006514,1.33e-07,2;UBERON:0002702,1.51e-07,2;UBERON:0001876,1.72e-07,2;UBERON:0002148,1.89e-07,2;UBERON:0006331,1.89e-07,2;UBERON:0009662,1.89e-07,2;UBERON:0002771,3.34e-07,2;UBERON:0001954,3.55e-07,2;UBERON:0003022,3.55e-07,2;UBERON:0002421,3.55e-07,2;UBERON:0002600,3.55e-07,2 | |||
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|short_description=p3@GAD2 | |short_description=p3@GAD2 | ||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p3@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAD2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 8bp_to_ENST00000428517_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q5VZ31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data