FFCP PHASE1:Hg19::chr10:26505670..26505692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2572 | |EntrezGene=2572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4093 | |HGNC=4093 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VZ31 | |UniProt=Q5VZ31 | ||
|association_with_transcript=8bp_to_ENST00000428517_5end | |association_with_transcript=8bp_to_ENST00000428517_5end | ||
|cluster_id=chr10:26505670..26505692,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_3_at_GAD2_5end | |description=CAGE_peak_3_at_GAD2_5end | ||
|id=chr10:26505670..26505692,+ | |id=chr10:26505670..26505692,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.93e-08!5 | |ontology_enrichment_celltype=CL:0002322!2.93e-08!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.55e-20;82!UBERON:0006215;4.27e-10;3!UBERON:0006241;2.43e-09;3!UBERON:0003057;2.43e-09;3!UBERON:0010122;4.05e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.28e-73!57;UBERON:0005068!3.28e-73!57;UBERON:0006241!3.28e-73!57;UBERON:0007135!3.28e-73!57;UBERON:0005743!1.69e-69!86;UBERON:0001017!8.75e-69!82;UBERON:0000073!3.14e-63!94;UBERON:0001016!3.14e-63!94;UBERON:0002616!2.63e-61!59;UBERON:0002780!2.13e-59!41;UBERON:0001890!2.13e-59!41;UBERON:0006240!2.13e-59!41;UBERON:0003080!1.05e-57!42;UBERON:0000955!4.86e-57!69;UBERON:0006238!4.86e-57!69;UBERON:0003075!1.71e-55!86;UBERON:0007284!1.71e-55!86;UBERON:0002020!2.14e-54!34;UBERON:0003528!2.14e-54!34;UBERON:0001893!2.94e-54!34;UBERON:0002791!2.17e-52!33;UBERON:0002346!3.00e-52!90;UBERON:0001869!2.29e-51!32;UBERON:0003056!2.09e-44!61;UBERON:0002619!8.58e-41!22;UBERON:0000956!3.31e-38!25;UBERON:0000203!3.31e-38!25;UBERON:0001950!1.83e-37!20;UBERON:0007023!3.25e-34!115;UBERON:0000033!5.52e-32!123;UBERON:0004121!1.41e-30!169;UBERON:0000153!9.91e-30!129;UBERON:0007811!9.91e-30!129;UBERON:0000924!1.96e-29!173;UBERON:0006601!1.96e-29!173;UBERON:0002420!1.76e-17!9;UBERON:0007245!1.76e-17!9;UBERON:0010009!1.76e-17!9;UBERON:0010011!1.76e-17!9;UBERON:0000454!1.76e-17!9;UBERON:0002308!1.86e-17!9;UBERON:0000125!1.86e-17!9;UBERON:0003076!5.00e-16!15;UBERON:0003057!5.00e-16!15;UBERON:0000025!8.19e-16!194;UBERON:0001871!7.74e-15!7;UBERON:0009663!4.84e-14!7;UBERON:0000200!5.33e-12!6;UBERON:0004733!1.03e-11!12;UBERON:0002028!1.03e-11!12;UBERON:0007277!1.03e-11!12;UBERON:0000064!4.41e-11!219;UBERON:0002298!7.02e-11!8;UBERON:0004732!1.20e-10!13;UBERON:0001872!2.89e-10!5;UBERON:0000349!2.89e-10!5;UBERON:0000119!2.94e-10!312;UBERON:0002021!4.78e-10!5;UBERON:0004111!8.76e-10!241;UBERON:0000483!1.59e-09!309;UBERON:0000369!2.68e-09!4;UBERON:0002435!2.68e-09!4;UBERON:0000204!2.68e-09!4;UBERON:0010082!2.68e-09!4;UBERON:0000062!1.85e-07!511;UBERON:0005383!2.14e-07!3;UBERON:0005382!2.14e-07!3;UBERON:0002680!2.20e-07!9;UBERON:0001895!2.20e-07!9;UBERON:0010092!2.20e-07!9;UBERON:0000922!2.86e-07!612;UBERON:0000477!5.26e-07!286;UBERON:0001894!5.29e-07!7;UBERON:0006222!5.29e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!3.28e-73!57;UBERON:0005068!3.28e-73!57;UBERON:0006241!3.28e-73!57;UBERON:0007135!3.28e-73!57;UBERON:0005743!1.69e-69!86;UBERON:0001017!8.75e-69!82;UBERON:0000073!3.14e-63!94;UBERON:0001016!3.14e-63!94;UBERON:0002616!2.63e-61!59;UBERON:0002780!2.13e-59!41;UBERON:0001890!2.13e-59!41;UBERON:0006240!2.13e-59!41;UBERON:0003080!1.05e-57!42;UBERON:0000955!4.86e-57!69;UBERON:0006238!4.86e-57!69;UBERON:0003075!1.71e-55!86;UBERON:0007284!1.71e-55!86;UBERON:0002020!2.14e-54!34;UBERON:0003528!2.14e-54!34;UBERON:0001893!2.94e-54!34;UBERON:0002791!2.17e-52!33;UBERON:0002346!3.00e-52!90;UBERON:0001869!2.29e-51!32;UBERON:0003056!2.09e-44!61;UBERON:0002619!8.58e-41!22;UBERON:0000956!3.31e-38!25;UBERON:0000203!3.31e-38!25;UBERON:0001950!1.83e-37!20;UBERON:0007023!3.25e-34!115;UBERON:0000033!5.52e-32!123;UBERON:0004121!1.41e-30!169;UBERON:0000153!9.91e-30!129;UBERON:0007811!9.91e-30!129;UBERON:0000924!1.96e-29!173;UBERON:0006601!1.96e-29!173;UBERON:0002420!1.76e-17!9;UBERON:0007245!1.76e-17!9;UBERON:0010009!1.76e-17!9;UBERON:0010011!1.76e-17!9;UBERON:0000454!1.76e-17!9;UBERON:0002308!1.86e-17!9;UBERON:0000125!1.86e-17!9;UBERON:0003076!5.00e-16!15;UBERON:0003057!5.00e-16!15;UBERON:0000025!8.19e-16!194;UBERON:0001871!7.74e-15!7;UBERON:0009663!4.84e-14!7;UBERON:0000200!5.33e-12!6;UBERON:0004733!1.03e-11!12;UBERON:0002028!1.03e-11!12;UBERON:0007277!1.03e-11!12;UBERON:0000064!4.41e-11!219;UBERON:0002298!7.02e-11!8;UBERON:0004732!1.20e-10!13;UBERON:0001872!2.89e-10!5;UBERON:0000349!2.89e-10!5;UBERON:0000119!2.94e-10!312;UBERON:0002021!4.78e-10!5;UBERON:0004111!8.76e-10!241;UBERON:0000483!1.59e-09!309;UBERON:0000369!2.68e-09!4;UBERON:0002435!2.68e-09!4;UBERON:0000204!2.68e-09!4;UBERON:0010082!2.68e-09!4;UBERON:0000062!1.85e-07!511;UBERON:0005383!2.14e-07!3;UBERON:0005382!2.14e-07!3;UBERON:0002680!2.20e-07!9;UBERON:0001895!2.20e-07!9;UBERON:0010092!2.20e-07!9;UBERON:0000922!2.86e-07!612;UBERON:0000477!5.26e-07!286;UBERON:0001894!5.29e-07!7;UBERON:0006222!5.29e-07!7 | ||
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|short_description=p3@GAD2 | |short_description=p3@GAD2 | ||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p3@GAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAD2_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 8bp_to_ENST00000428517_5end |
EntrezGene: | GAD2 |
HGNC: | 4093 |
UniProt: | Q5VZ31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data