FFCP PHASE1:Hg19::chr4:40631474..40631491,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:40631474..40631491,- to FFCP PHASE1:Hg19::chr4:40631474..40631491,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000513044_5end | |||
|cluster_id=chr4:40631474..40631491,- | |||
|description=CAGE_peak_11_at_RBM47_5end | |||
|id=chr4:40631474..40631491,- | |||
|ontology_enrichment_celltype=CL:0002009!2.46e-31!65;CL:0002194!2.03e-29!63;CL:0000576!2.03e-29!63;CL:0000040!2.03e-29!63;CL:0000559!2.03e-29!63;CL:0000557!5.07e-28!71;CL:0000766!8.13e-27!76;CL:0000839!1.46e-25!70;CL:0000860!1.58e-23!45;CL:0002057!2.98e-22!42;CL:0000763!2.91e-17!112;CL:0000049!2.91e-17!112;CL:0000738!1.81e-13!140;CL:0002031!1.49e-12!124;CL:0002087!3.68e-12!119;CL:0002032!4.75e-09!165;CL:0000837!4.75e-09!165;CL:0000037!2.63e-08!172;CL:0000566!2.63e-08!172;CL:0000039!2.73e-08!7;CL:0000586!2.73e-08!7;CL:0000988!6.52e-07!182;CL:0002322!7.14e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.09e-39;33!CL:0002057;2.09e-39;33!CL:0000473;7.96e-29;39!CL:0000234;7.96e-29;39!CL:0000576;5.12e-23;48!CL:0000039;1.70e-18;7!CL:0000586;1.70e-18;7!CL:0002322;8.24e-15;5!CL:0000766;2.82e-11;69!CL:0000840;1.54e-07;5!CL:0000763;7.43e-07;100!CL:0001014;9.32e-07;2!CL:0001016;9.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.14e-35,61;CL:0000860,2.52e-33,42;CL:0002057,2.52e-33,42;CL:0002194,6.39e-32,59;CL:0000576,6.39e-32,59;CL:0000040,6.39e-32,59;CL:0000559,6.39e-32,59;CL:0000557,1.01e-31,67;CL:0000473,7.24e-31,48;CL:0000234,7.24e-31,48;CL:0000839,1.05e-27,66;CL:0000766,8.26e-27,72;CL:0000039,2.71e-18,7;CL:0000586,2.71e-18,7;CL:0000763,6.76e-18,108;CL:0000049,6.76e-18,108;CL:0002031,3.84e-15,120;CL:0002322,8.80e-15,5;CL:0002087,1.12e-13,115;CL:0000738,1.81e-13,136;CL:0002032,4.37e-10,161;CL:0000837,4.37e-10,161;CL:0000037,2.49e-09,168;CL:0000988,1.88e-08,177;CL:0000840,1.67e-07,5;CL:0001029,1.67e-07,5;CL:0001014,9.36e-07,2;CL:0001016,9.36e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.56e-23;42!UBERON:0009117;6.87e-10;10!UBERON:0005564;6.87e-10;10 | |||
|ontology_enrichment_disease=DOID:305!5.77e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.17e-22!80;UBERON:0001474!5.81e-21!86;UBERON:0002405!2.44e-18!115;UBERON:0002390!3.65e-17!102;UBERON:0003061!3.65e-17!102;UBERON:0004765!9.84e-16!101;UBERON:0001434!9.84e-16!101;UBERON:0002193!9.08e-15!112;UBERON:0003135!5.71e-09!11;UBERON:0000062!2.91e-08!511;UBERON:0003133!5.32e-07!48;UBERON:0004176!5.54e-07!22;UBERON:0000473!6.78e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.38e-12;8!UBERON:0003135;2.34e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.73e-27,76;UBERON:0001474,2.96e-26,82;UBERON:0004765,3.78e-23,90;UBERON:0002405,1.67e-20,93;UBERON:0001434,5.71e-20,100;UBERON:0002390,4.95e-19,98;UBERON:0003061,4.95e-19,98;UBERON:0002193,1.67e-16,108;UBERON:0000473,5.02e-12,8;UBERON:0003135,2.29e-11,11;UBERON:0002204,1.12e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.61130724598361,1.23150884174919,0.550975469195755,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,1.11957737119962,0.647787332037959,1.80302897343931,1.16318591023652,0.377875943688809,0.485168122375632,0.697287110717054,1.6446715520873,1.23882548358041,1.43846196161075,1.0246428261164,3.07426898855161,3.44745680736619,1.29096936716765,8.12558919566051,0.941211697713023,1.91034305040492,1.57306439111559,1.53041946185451,2.24650318953266,3.83602275479425,1.64925650093358,0.997318288108159,1.27867425159808,4.64334781805734,6.24123747160254,8.09668923694247,1.00499466102697,1.5644487552606,2.17188844705117,1.81619850790011,8.10210799172642,10.7597211729901,0,0,0,0,0,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.221729397462564,0.702678285545008,2.35762335895883,0,0,2.59637914923747,1.21890816109487,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,5.97671160035017,5.4337205011809,4.29917588617218,4.25010325563019,3.78481276313443,2.55484151353081,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.392442930250692,0,0,0,0,0,1.26755034821831,0,2.95394953340702,0,0.245976877086227,0,0.219500570817251,0,0,0.185176890317059,0,0,2.88662684050547,0.34779121492523,0,0,0,0,0,0,0.738651018262192,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,1.12284324244932,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0.306806047506464,0.615424027305347,0,0.359473404589307,2.68531762013414,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.61221999997337,0,0.455173793141999,0.762760950878299,7.09163045303809,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.341826167541004,1.1528195219403,1.07709173291727,1.62971057883012,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0.141353071433941,0,1.99052386215701,0,0,0,0,0,0.134802265961354,0,0,0,0.586993856796269,0,1.57833761139756,0,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,1.07791637155815,0,0.52418000472609,0,0.483781656445426,0.146178634172371,0.164230914106418,0.387956065953678,2.47117154736201,0,0,0,0,0.391102765469606,0.160317640503067,1.49417096317547,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.590564889088493,0,0,0,4.98334760241559,6.18927464687552,10.3860084507296,3.14963448172101,3.86900977278975,0,0,6.14684516933746,1.94081976099493,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.58620893471233,1.32506888912221,0,0,1.02652102730598,0,0.320362237703084,0.628817220398664,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0.415045904808692,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,1.09642024789354,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0.577628330751691,0,0,0,0,0,0,2.09525355585138,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0.532214220975833,0,0,0,0,0.354581522651905,0,0.39246546425257,0.157115589916002,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0.860454717640555,0.118332000730565,0.255640214277473,1.69354820076372,0.68732060563215,0.93061915699296,0,10.2906997253969,0.196300467230486,2.8041122745922,0,0,0,0,0,0,0,0,0,0.150962843566674,0.463044948647668,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0.299823467774787,0,0,0,0,1.37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| ||
|short_description=p11@RBM47 | |||
}} | }} |
Latest revision as of 18:48, 17 September 2015
Short description: | p11@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RBM47_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_ENST00000513044_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.14e-35 | 61 |
classical monocyte | 2.52e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-33 | 42 |
monopoietic cell | 6.39e-32 | 59 |
monocyte | 6.39e-32 | 59 |
monoblast | 6.39e-32 | 59 |
promonocyte | 6.39e-32 | 59 |
granulocyte monocyte progenitor cell | 1.01e-31 | 67 |
defensive cell | 7.24e-31 | 48 |
phagocyte | 7.24e-31 | 48 |
myeloid lineage restricted progenitor cell | 1.05e-27 | 66 |
myeloid leukocyte | 8.26e-27 | 72 |
germ line cell | 2.71e-18 | 7 |
germ cell | 2.71e-18 | 7 |
myeloid cell | 6.76e-18 | 108 |
common myeloid progenitor | 6.76e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 3.84e-15 | 120 |
embryonic stem cell | 8.80e-15 | 5 |
nongranular leukocyte | 1.12e-13 | 115 |
leukocyte | 1.81e-13 | 136 |
hematopoietic oligopotent progenitor cell | 4.37e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.37e-10 | 161 |
hematopoietic stem cell | 2.49e-09 | 168 |
hematopoietic cell | 1.88e-08 | 177 |
immature conventional dendritic cell | 1.67e-07 | 5 |
common dendritic progenitor | 1.67e-07 | 5 |
CD1a-positive Langerhans cell | 9.36e-07 | 2 |
immature CD1a-positive Langerhans cell | 9.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.73e-27 | 76 |
bone element | 2.96e-26 | 82 |
skeletal element | 3.78e-23 | 90 |
immune system | 1.67e-20 | 93 |
skeletal system | 5.71e-20 | 100 |
hematopoietic system | 4.95e-19 | 98 |
blood island | 4.95e-19 | 98 |
hemolymphoid system | 1.67e-16 | 108 |
testis | 5.02e-12 | 8 |
male reproductive organ | 2.29e-11 | 11 |
musculoskeletal system | 1.12e-08 | 167 |