FFCP PHASE1:Hg19::chr12:20848282..20848305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53919 | |EntrezGene=53919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |HGNC=13819 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JPA4,B7Z3Q3,Q9NYB5,B7Z8P1 | |UniProt=Q5JPA4,B7Z3Q3,Q9NYB5,B7Z8P1 | ||
|association_with_transcript=0bp_to_ENST00000534996,ENST00000545604,NM_001145945,NM_001145946,uc001rej.3,uc009zip.2,uc010sii.1,uc010sij.1_5end | |association_with_transcript=0bp_to_ENST00000534996,ENST00000545604,NM_001145945,NM_001145946,uc001rej.3,uc009zip.2,uc010sii.1,uc010sij.1_5end | ||
|cluster_id=chr12:20848282..20848305,+ | |||
|coexpression_cluster_id=C1305 | |||
|description=CAGE_peak_6_at_SLCO1C1_5end | |description=CAGE_peak_6_at_SLCO1C1_5end | ||
|id=chr12:20848282..20848305,+ | |id=chr12:20848282..20848305,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.38e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.77e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.85e-62!115;UBERON:0001049!4.75e-59!57;UBERON:0005068!4.75e-59!57;UBERON:0006241!4.75e-59!57;UBERON:0007135!4.75e-59!57;UBERON:0001017!3.71e-57!82;UBERON:0005743!2.80e-56!86;UBERON:0000073!2.04e-51!94;UBERON:0001016!2.04e-51!94;UBERON:0002616!2.95e-51!59;UBERON:0000955!1.16e-45!69;UBERON:0006238!1.16e-45!69;UBERON:0002346!6.76e-44!90;UBERON:0003075!4.14e-42!86;UBERON:0007284!4.14e-42!86;UBERON:0002780!3.12e-39!41;UBERON:0001890!3.12e-39!41;UBERON:0006240!3.12e-39!41;UBERON:0003080!4.52e-38!42;UBERON:0002020!1.23e-33!34;UBERON:0003528!1.23e-33!34;UBERON:0001893!1.31e-33!34;UBERON:0002791!3.68e-32!33;UBERON:0001869!3.57e-30!32;UBERON:0000924!2.31e-28!173;UBERON:0006601!2.31e-28!173;UBERON:0000153!1.13e-27!129;UBERON:0007811!1.13e-27!129;UBERON:0004121!9.32e-27!169;UBERON:0000033!5.94e-26!123;UBERON:0003056!3.83e-25!61;UBERON:0002619!2.06e-23!22;UBERON:0001950!6.23e-23!20;UBERON:0000956!2.52e-22!25;UBERON:0000203!2.52e-22!25;UBERON:0003076!4.51e-22!15;UBERON:0003057!4.51e-22!15;UBERON:0004733!2.43e-17!12;UBERON:0002028!2.43e-17!12;UBERON:0007277!2.43e-17!12;UBERON:0004732!8.78e-16!13;UBERON:0001871!8.97e-15!7;UBERON:0002420!2.33e-13!9;UBERON:0007245!2.33e-13!9;UBERON:0010009!2.33e-13!9;UBERON:0010011!2.33e-13!9;UBERON:0000454!2.33e-13!9;UBERON:0000025!2.43e-13!194;UBERON:0002308!4.94e-13!9;UBERON:0000125!4.94e-13!9;UBERON:0002298!2.29e-12!8;UBERON:0002680!7.93e-12!9;UBERON:0001895!7.93e-12!9;UBERON:0010092!7.93e-12!9;UBERON:0000200!3.37e-11!6;UBERON:0004111!8.32e-11!241;UBERON:0009663!8.84e-10!7;UBERON:0000477!1.77e-09!286;UBERON:0000483!4.72e-09!309;UBERON:0000119!8.18e-09!312;UBERON:0000475!9.06e-08!365;UBERON:0000064!1.38e-07!219;UBERON:0001896!2.12e-07!3;UBERON:0005290!2.12e-07!3;UBERON:0010096!2.12e-07!3;UBERON:0000349!3.85e-07!5;UBERON:0000922!4.63e-07!612;UBERON:0000481!5.47e-07!347;UBERON:0002037!5.60e-07!6;UBERON:0006215!5.60e-07!6;UBERON:0001894!5.61e-07!7;UBERON:0006222!5.61e-07!7;UBERON:0006331!7.62e-07!3;UBERON:0000988!9.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.94e-33;53!UBERON:0002616;4.94e-33;53!UBERON:0002780;1.63e-30;41!UBERON:0001890;1.63e-30;41!UBERON:0002791;5.70e-26;32!UBERON:0002619;1.38e-25;22!UBERON:0001893;2.99e-24;34!UBERON:0003528;3.40e-24;34!UBERON:0002020;3.40e-24;34!UBERON:0001950;4.14e-23;20!UBERON:0002298;1.82e-22;6!UBERON:0000956;2.17e-22;25!UBERON:0000203;2.17e-22;25!UBERON:0001869;5.02e-22;32!UBERON:0001017;1.08e-17;75!UBERON:0000349;2.41e-17;5!UBERON:0001896;2.84e-17;3!UBERON:0005290;2.84e-17;3!UBERON:0000955;6.89e-17;68!UBERON:0004733;1.15e-15;12!UBERON:0002028;1.15e-15;12!UBERON:0002420;1.21e-14;9!UBERON:0007245;1.21e-14;9!UBERON:0010009;1.21e-14;9!UBERON:0010011;1.21e-14;9!UBERON:0000454;1.21e-14;9!UBERON:0004732;2.05e-14;13!UBERON:0001016;1.02e-13;83!UBERON:0002784;2.05e-12;4!UBERON:0001871;3.26e-12;6!UBERON:0001876;1.70e-11;2!UBERON:0001897;1.70e-11;2!UBERON:0010225;1.70e-11;2!UBERON:0000125;1.08e-09;9!UBERON:0002308;1.08e-09;9!UBERON:0007023;2.84e-09;114!UBERON:0011216;2.10e-08;132!UBERON:0000988;6.02e-08;3!UBERON:0001870;6.02e-08;3!UBERON:0009663;1.87e-07;7!UBERON:0001894;2.72e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.86e-53,56;UBERON:0005068,8.86e-53,56;UBERON:0006241,8.86e-53,56;UBERON:0007135,8.86e-53,56;UBERON:0000073,3.13e-51,53;UBERON:0002616,3.13e-51,53;UBERON:0000955,2.15e-45,68;UBERON:0006238,2.15e-45,68;UBERON:0002346,2.31e-42,86;UBERON:0001017,9.64e-41,81;UBERON:0003075,9.05e-38,82;UBERON:0007284,9.05e-38,82;UBERON:0002780,1.55e-36,41;UBERON:0001890,1.55e-36,41;UBERON:0003080,1.55e-36,41;UBERON:0006240,1.55e-36,41;UBERON:0001016,3.39e-36,89;UBERON:0003528,1.35e-30,34;UBERON:0002020,1.35e-30,34;UBERON:0001893,1.45e-30,34;UBERON:0010371,1.11e-28,104;UBERON:0002791,3.13e-28,32;UBERON:0003056,1.72e-26,61;UBERON:0007023,7.38e-26,114;UBERON:0010314,1.58e-25,132;UBERON:0002619,2.27e-25,22;UBERON:0001869,4.05e-24,32;UBERON:0001950,6.84e-23,20;UBERON:0002298,7.54e-23,6;UBERON:0000956,3.35e-22,25;UBERON:0000203,3.35e-22,25;UBERON:0004121,1.89e-21,171;UBERON:0000924,1.89e-21,171;UBERON:0006601,1.89e-21,171;UBERON:0000349,1.46e-17,5;UBERON:0001896,1.49e-17,3;UBERON:0005290,1.49e-17,3;UBERON:0010096,1.49e-17,3;UBERON:0003076,5.72e-17,15;UBERON:0003057,5.72e-17,15;UBERON:0004733,8.64e-16,12;UBERON:0002028,8.64e-16,12;UBERON:0007277,8.64e-16,12;UBERON:0002420,6.38e-15,9;UBERON:0007245,6.38e-15,9;UBERON:0010009,6.38e-15,9;UBERON:0010011,6.38e-15,9;UBERON:0000454,6.38e-15,9;UBERON:0011216,7.61e-15,223;UBERON:0004732,1.57e-14,13;UBERON:0000025,5.15e-13,192;UBERON:0002784,1.94e-12,4;UBERON:0001871,1.98e-12,6;UBERON:0001876,6.15e-12,2;UBERON:0001897,8.98e-12,2;UBERON:0010225,8.98e-12,2;UBERON:0000125,8.24e-10,9;UBERON:0002308,8.24e-10,9;UBERON:0004111,2.54e-09,240;UBERON:0000988,4.56e-08,3;UBERON:0001870,5.07e-08,3;UBERON:0009663,1.74e-07,7;UBERON:0001894,2.64e-07,7;UBERON:0006222,2.64e-07,7;UBERON:0000483,6.43e-07,306;UBERON:0002038,7.19e-07,1;UBERON:0009661,7.19e-07,1;UBERON:0002950,7.19e-07,1;UBERON:0001891,7.19e-07,1;UBERON:0009616,7.19e-07,1;UBERON:0010286,7.19e-07,1;UBERON:0000119,8.49e-07,309;UBERON:0003112,9.48e-07,1;UBERON:0011158,9.48e-07,1;UBERON:0003128,9.48e-07,1;UBERON:0001703,9.48e-07,1;UBERON:0002241,9.48e-07,1;UBERON:0004761,9.48e-07,1;UBERON:0009617,9.48e-07,1 | |||
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|short_description=p6@SLCO1C1 | |short_description=p6@SLCO1C1 | ||
}} | }} |
Latest revision as of 19:04, 17 September 2015
Short description: | p6@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | 0bp_to_ENST00000534996, ENST00000545604, NM_001145945, NM_001145946, uc001rej.3, uc009zip.2, uc010sii.1, uc010sij.1_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | Q5JPA4B7Z3Q3Q9NYB5B7Z8P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.38e-11 | 2 |