FFCP PHASE1:Hg19::chr4:46392101..46392112,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:46392101..46392112,- to FFCP PHASE1:Hg19::chr4:46392101..46392112,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2555 | |EntrezGene=2555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |HGNC=4076 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0U7,P47869 | |UniProt=A8K0U7,P47869 | ||
|association_with_transcript=-45bp_to_NM_000807,uc010igc.2,uc011bzc.1_5end | |||
|cluster_id=chr4:46392101..46392112,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_GABRA2_5end | |||
|id=chr4:46392101..46392112,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.56e-17;82!UBERON:0010122;1.20e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.35e-67!57;UBERON:0005068!2.35e-67!57;UBERON:0006241!2.35e-67!57;UBERON:0007135!2.35e-67!57;UBERON:0001017!4.24e-60!82;UBERON:0002780!4.53e-59!41;UBERON:0001890!4.53e-59!41;UBERON:0006240!4.53e-59!41;UBERON:0005743!6.75e-59!86;UBERON:0003075!1.28e-58!86;UBERON:0007284!1.28e-58!86;UBERON:0002616!1.50e-58!59;UBERON:0003080!2.07e-57!42;UBERON:0002346!2.73e-55!90;UBERON:0000955!7.93e-55!69;UBERON:0006238!7.93e-55!69;UBERON:0007023!4.19e-54!115;UBERON:0001893!9.71e-54!34;UBERON:0002020!2.14e-53!34;UBERON:0003528!2.14e-53!34;UBERON:0002791!7.58e-52!33;UBERON:0000073!7.80e-52!94;UBERON:0001016!7.80e-52!94;UBERON:0001869!3.32e-50!32;UBERON:0003056!1.06e-44!61;UBERON:0002619!1.09e-42!22;UBERON:0001950!1.35e-38!20;UBERON:0000033!2.25e-37!123;UBERON:0000956!6.73e-37!25;UBERON:0000203!6.73e-37!25;UBERON:0000153!2.31e-36!129;UBERON:0007811!2.31e-36!129;UBERON:0004121!2.25e-33!169;UBERON:0000924!3.42e-32!173;UBERON:0006601!3.42e-32!173;UBERON:0000025!5.07e-19!194;UBERON:0002420!1.58e-18!9;UBERON:0007245!1.58e-18!9;UBERON:0010009!1.58e-18!9;UBERON:0010011!1.58e-18!9;UBERON:0000454!1.58e-18!9;UBERON:0000064!1.73e-18!219;UBERON:0002308!7.47e-18!9;UBERON:0000125!7.47e-18!9;UBERON:0004111!1.10e-16!241;UBERON:0000477!1.63e-15!286;UBERON:0000483!4.13e-15!309;UBERON:0000119!8.69e-15!312;UBERON:0009663!1.16e-14!7;UBERON:0000481!1.96e-13!347;UBERON:0000200!2.83e-13!6;UBERON:0001871!5.13e-13!7;UBERON:0000475!8.17e-13!365;UBERON:0002021!1.17e-11!5;UBERON:0003076!1.57e-11!15;UBERON:0003057!1.57e-11!15;UBERON:0000349!1.67e-11!5;UBERON:0001872!2.28e-11!5;UBERON:0002298!2.41e-11!8;UBERON:0000062!2.49e-11!511;UBERON:0004733!1.78e-09!12;UBERON:0002028!1.78e-09!12;UBERON:0007277!1.78e-09!12;UBERON:0000369!2.02e-09!4;UBERON:0002435!2.02e-09!4;UBERON:0000204!2.02e-09!4;UBERON:0010082!2.02e-09!4;UBERON:0000922!1.11e-08!612;UBERON:0004732!1.26e-08!13;UBERON:0002050!1.71e-08!605;UBERON:0005423!1.71e-08!605;UBERON:0000923!5.11e-08!604;UBERON:0005291!5.11e-08!604;UBERON:0006598!5.11e-08!604;UBERON:0002532!5.11e-08!604;UBERON:0002771!1.47e-07!3;UBERON:0005383!1.70e-07!3;UBERON:0005382!1.70e-07!3;UBERON:0000467!1.72e-07!625;UBERON:0000480!1.93e-07!626;UBERON:0000468!2.47e-07!659;UBERON:0001894!3.94e-07!7;UBERON:0006222!3.94e-07!7;UBERON:0001155!5.73e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.74e-94;32!UBERON:0001893;1.16e-91;34!UBERON:0002619;1.32e-88;22!UBERON:0002791;1.49e-88;32!UBERON:0003528;1.76e-85;34!UBERON:0002020;1.76e-85;34!UBERON:0002780;2.92e-80;41!UBERON:0001890;2.92e-80;41!UBERON:0001950;6.27e-80;20!UBERON:0000956;9.41e-78;25!UBERON:0000203;9.41e-78;25!UBERON:0000073;5.86e-64;53!UBERON:0002616;5.86e-64;53!UBERON:0001017;3.31e-38;75!UBERON:0000955;5.39e-38;68!UBERON:0001016;5.71e-33;83!UBERON:0002420;1.03e-29;9!UBERON:0007245;1.03e-29;9!UBERON:0010009;1.03e-29;9!UBERON:0010011;1.03e-29;9!UBERON:0000454;1.03e-29;9!UBERON:0000200;2.88e-26;6!UBERON:0002021;1.29e-22;5!UBERON:0000125;1.76e-22;9!UBERON:0002308;1.76e-22;9!UBERON:0000349;2.86e-22;5!UBERON:0001872;3.80e-22;5!UBERON:0001871;5.78e-22;6!UBERON:0009663;8.98e-22;7!UBERON:0000369;6.95e-18;4!UBERON:0002435;6.95e-18;4!UBERON:0000204;6.95e-18;4!UBERON:0007023;4.41e-17;114!UBERON:0011216;1.01e-14;132!UBERON:0001870;2.26e-14;3!UBERON:0005383;6.25e-14;3!UBERON:0005382;6.25e-14;3!UBERON:0010314;2.34e-10;132!UBERON:0001954;3.17e-10;2!UBERON:0002702;3.17e-10;2!UBERON:0003022;3.17e-10;2!UBERON:0002421;3.17e-10;2!UBERON:0002600;3.17e-10;2!UBERON:0002771;5.18e-10;2!UBERON:0001876;7.89e-10;2!UBERON:0001873;1.20e-09;2!UBERON:0001894;1.53e-09;7!UBERON:0001875;2.34e-09;2!UBERON:0006514;2.34e-09;2!UBERON:0001897;4.51e-09;2!UBERON:0010225;4.51e-09;2!UBERON:0004733;2.95e-08;12!UBERON:0002028;2.95e-08;12!UBERON:0004732;1.33e-07;13!UBERON:0002680;2.24e-07;9!UBERON:0001895;2.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.26e-119,56;UBERON:0005068,4.26e-119,56;UBERON:0006241,4.26e-119,56;UBERON:0007135,4.26e-119,56;UBERON:0000073,5.34e-114,53;UBERON:0002616,5.34e-114,53;UBERON:0002780,5.22e-113,41;UBERON:0001890,5.22e-113,41;UBERON:0003080,5.22e-113,41;UBERON:0006240,5.22e-113,41;UBERON:0001893,1.08e-106,34;UBERON:0001869,3.12e-106,32;UBERON:0003528,1.31e-99,34;UBERON:0002020,1.31e-99,34;UBERON:0002791,6.23e-99,32;UBERON:0000955,7.42e-91,68;UBERON:0006238,7.42e-91,68;UBERON:0002619,7.69e-89,22;UBERON:0001017,6.04e-88,81;UBERON:0001950,3.66e-80,20;UBERON:0003075,3.54e-79,82;UBERON:0007284,3.54e-79,82;UBERON:0001016,1.64e-78,89;UBERON:0000956,5.83e-78,25;UBERON:0000203,5.83e-78,25;UBERON:0002346,3.75e-75,86;UBERON:0003056,4.40e-74,61;UBERON:0010371,7.94e-61,104;UBERON:0007023,3.05e-52,114;UBERON:0010314,5.81e-49,132;UBERON:0004121,1.84e-37,171;UBERON:0000924,1.84e-37,171;UBERON:0006601,1.84e-37,171;UBERON:0011216,1.45e-33,223;UBERON:0002420,8.68e-30,9;UBERON:0007245,8.68e-30,9;UBERON:0010009,8.68e-30,9;UBERON:0010011,8.68e-30,9;UBERON:0000454,8.68e-30,9;UBERON:0000025,3.28e-29,192;UBERON:0000200,4.09e-26,6;UBERON:0002021,1.02e-22,5;UBERON:0000125,1.63e-22,9;UBERON:0002308,1.63e-22,9;UBERON:0000349,2.15e-22,5;UBERON:0001872,4.16e-22,5;UBERON:0001871,4.82e-22,6;UBERON:0009663,8.36e-22,7;UBERON:0004111,1.12e-21,240;UBERON:0000369,5.02e-18,4;UBERON:0002435,5.02e-18,4;UBERON:0000204,5.02e-18,4;UBERON:0010082,5.02e-18,4;UBERON:0000483,2.86e-16,306;UBERON:0000119,5.00e-16,309;UBERON:0001870,2.32e-14,3;UBERON:0005383,5.37e-14,3;UBERON:0005382,5.37e-14,3;UBERON:0003076,2.45e-12,15;UBERON:0003057,2.45e-12,15;UBERON:0001954,3.17e-10,2;UBERON:0003022,3.17e-10,2;UBERON:0002421,3.17e-10,2;UBERON:0002600,3.17e-10,2;UBERON:0002702,3.47e-10,2;UBERON:0002771,5.19e-10,2;UBERON:0001876,7.07e-10,2;UBERON:0001873,1.15e-09,2;UBERON:0010122,1.15e-09,2;UBERON:0001894,1.35e-09,7;UBERON:0006222,1.35e-09,7;UBERON:0001875,2.96e-09,2;UBERON:0006514,2.96e-09,2;UBERON:0001897,3.09e-09,2;UBERON:0010225,3.09e-09,2;UBERON:0004733,2.88e-08,12;UBERON:0002028,2.88e-08,12;UBERON:0007277,2.88e-08,12;UBERON:0000923,4.95e-08,560;UBERON:0010316,4.95e-08,560;UBERON:0005291,4.95e-08,560;UBERON:0006598,4.95e-08,560;UBERON:0010317,4.95e-08,560;UBERON:0002532,4.95e-08,560;UBERON:0002050,6.57e-08,564;UBERON:0004732,1.30e-07,13;UBERON:0005423,2.10e-07,581;UBERON:0002680,2.16e-07,9;UBERON:0001895,2.16e-07,9;UBERON:0010092,2.16e-07,9;UBERON:0000922,4.30e-07,592 | |||
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|short_description=p6@GABRA2 | |||
}} | }} |
Latest revision as of 21:40, 17 September 2015
Short description: | p6@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GABRA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -45bp_to_NM_000807, uc010igc.2, uc011bzc.1_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | A8K0U7P47869 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data