FFCP PHASE1:Hg19::chr1:158801238..158801255,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |||
|TSSclassifier=strong | |||
|UniProt=P41218,Q5VUU6 | |||
|association_with_transcript=70bp_to_NM_002432,uc001fsz.1_5end | |||
|cluster_id=chr1:158801238..158801255,+ | |||
|coexpression_cluster_id=C2533 | |||
|description=CAGE_peak_4_at_MNDA_5end | |||
|id=chr1:158801238..158801255,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.26e-75!76;CL:0002194!2.08e-67!63;CL:0000576!2.08e-67!63;CL:0000040!2.08e-67!63;CL:0000559!2.08e-67!63;CL:0002009!2.15e-67!65;CL:0000557!3.08e-62!71;CL:0000738!5.19e-61!140;CL:0000839!6.11e-61!70;CL:0000763!2.36e-60!112;CL:0000049!2.36e-60!112;CL:0002057!2.15e-58!42;CL:0000037!1.29e-56!172;CL:0000566!1.29e-56!172;CL:0002087!1.16e-53!119;CL:0002032!1.51e-53!165;CL:0000837!1.51e-53!165;CL:0000860!1.67e-53!45;CL:0000988!5.37e-52!182;CL:0002031!1.59e-48!124;CL:0000134!1.00e-14!358;CL:0002393!2.25e-14!9;CL:0002397!2.25e-14!9;CL:0002320!5.73e-14!365;CL:0000094!2.29e-13!8;CL:0000219!2.43e-11!390;CL:0000081!3.46e-09!11;CL:0000048!2.64e-08!430;CL:0000723!6.91e-08!436;CL:0000034!9.69e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-58;33!CL:0002057;3.02e-58;33!CL:0000473;5.75e-51;39!CL:0000234;5.75e-51;39!CL:0000576;6.59e-51;48!CL:0000766;2.03e-39;69!CL:0000763;1.45e-22;100!CL:0000094;4.29e-19;8!CL:0002393;3.88e-18;6!CL:0002397;3.88e-18;6!CL:0002087;3.99e-14;104!CL:0000081;1.41e-13;11!CL:0000738;2.99e-11;136!CL:0000775;3.33e-11;3!CL:0000988;1.22e-10;177!CL:0000771;1.50e-07;2!CL:0000219;7.94e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.96e-94,72;CL:0000473,1.01e-87,48;CL:0000234,1.01e-87,48;CL:0000860,6.95e-86,42;CL:0002057,6.95e-86,42;CL:0002194,1.43e-83,59;CL:0000576,1.43e-83,59;CL:0000040,1.43e-83,59;CL:0000559,1.43e-83,59;CL:0002009,1.63e-80,61;CL:0000839,1.13e-73,66;CL:0000557,2.00e-72,67;CL:0000763,8.83e-67,108;CL:0000049,8.83e-67,108;CL:0000738,8.65e-51,136;CL:0002032,1.61e-44,161;CL:0000837,1.61e-44,161;CL:0002087,2.50e-44,115;CL:0000037,3.84e-44,168;CL:0000988,2.98e-41,177;CL:0002031,8.63e-40,120;CL:0002393,9.76e-21,9;CL:0002397,9.76e-21,9;CL:0000094,6.49e-19,8;CL:0000134,3.33e-14,354;CL:0002320,1.11e-13,361;CL:0000081,1.89e-13,11;CL:0000219,7.72e-12,386;CL:0000775,3.24e-11,3;CL:0000048,1.35e-09,427;CL:0000723,2.74e-09,433;CL:0000034,6.83e-09,441;CL:0000771,1.46e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.22e-59;42!CL:0000049;2.86e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.95e-70!102;UBERON:0003061!3.95e-70!102;UBERON:0002193!2.17e-65!112;UBERON:0002371!2.93e-55!80;UBERON:0001474!4.54e-50!86;UBERON:0004765!8.26e-40!101;UBERON:0001434!8.26e-40!101;UBERON:0002405!1.50e-39!115;UBERON:0003081!2.31e-25!216;UBERON:0002204!8.17e-18!167;UBERON:0000178!3.73e-15!15;UBERON:0000179!3.73e-15!15;UBERON:0000463!3.73e-15!15;UBERON:0002384!1.73e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.89e-20;15!UBERON:0000179;1.89e-20;15!UBERON:0000463;1.89e-20;15!UBERON:0002390;2.19e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.00e-79,98;UBERON:0003061,2.00e-79,98;UBERON:0002193,5.80e-71,108;UBERON:0002371,1.17e-62,76;UBERON:0001474,2.53e-57,82;UBERON:0002405,8.00e-52,93;UBERON:0004765,2.63e-51,90;UBERON:0001434,3.96e-45,100;UBERON:0003081,6.18e-32,203;UBERON:0002204,9.12e-23,167;UBERON:0000178,1.72e-20,15;UBERON:0000179,1.72e-20,15;UBERON:0000463,1.72e-20,15;UBERON:0000926,5.65e-17,315;UBERON:0004120,5.65e-17,315;UBERON:0006603,5.65e-17,315;UBERON:0002384,5.75e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.236132343941038,1.18009283054671,1.15148819429164,0.619264493264304,0,0,0,0,0,0.880801318004542,1.66198622559563,1.00272223735071,1.30206522429511,0.895661896959697,0.647787332037959,0.515151135268373,3.05336301437086,1.51150377475524,0.970336244751265,1.39457422143411,0.411167888021826,1.23882548358041,2.8769239232215,2.0492856522328,3.78371567821736,2.75796544589295,1.93645405075148,1.35426486594342,0.564727018627814,0.272906150057846,1.79778787556068,2.44867113896722,1.28371610830437,3.83602275479425,2.30895910130701,1.59570926097305,3.83602275479425,2.03146467040009,0,1.86846674698672,2.00998932205395,2.08593167368081,3.47502151528187,1.21079900526674,2.94622108790052,1.89877432464531,6.33765858935825,5.52771179909113,5.87044207423452,21.3424399178341,18.0212271409808,23.6266612444708,0.855038231223746,1.9891667719909,3.10529061399878,0,0,0,1.28019066769952,0.800791974072025,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,1.35517607169996,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0.348259474598534,1.06366368415092,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,1.8720341211139,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,23.9682247663098,38.8909896965232,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,0.862856803274467,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10426652925037,9.1756464857085,4.5571774973933,5.95579438644473,7.81588318863769,7.78167973431261,12.4207230564766,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0.228234679033192,1.09675927041116,0,0,0,0,0.851692475380653,1.37402137902306,1.84344458585075,1.3420566473545,1.50164227540718,1.17232857241224,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.746842107858986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,1.12780701575824,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p4@MNDA | |||
}} |
Latest revision as of 21:40, 17 September 2015
Short description: | p4@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MNDA_5end |
Coexpression cluster: | C2533_CD14_Neutrophils_Whole_Eosinophils_blood_Peripheral_CD14CD16 |
Association with transcript: | 70bp_to_NM_002432, uc001fsz.1_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | P41218Q5VUU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.00e-79 | 98 |
blood island | 2.00e-79 | 98 |
hemolymphoid system | 5.80e-71 | 108 |
bone marrow | 1.17e-62 | 76 |
bone element | 2.53e-57 | 82 |
immune system | 8.00e-52 | 93 |
skeletal element | 2.63e-51 | 90 |
skeletal system | 3.96e-45 | 100 |
lateral plate mesoderm | 6.18e-32 | 203 |
musculoskeletal system | 9.12e-23 | 167 |
blood | 1.72e-20 | 15 |
haemolymphatic fluid | 1.72e-20 | 15 |
organism substance | 1.72e-20 | 15 |
mesoderm | 5.65e-17 | 315 |
mesoderm-derived structure | 5.65e-17 | 315 |
presumptive mesoderm | 5.65e-17 | 315 |
connective tissue | 5.75e-13 | 371 |