FFCP PHASE1:Hg19::chr6:31554992..31555041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7940 | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |HGNC=14189 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460834_5end | |association_with_transcript=0bp_to_ENST00000460834_5end | ||
|cluster_id=chr6:31554992..31555041,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_2_at_LST1_5end | |description=CAGE_peak_2_at_LST1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.05e-54!172;CL:0000566!1.05e-54!172;CL:0000763!4.77e-53!112;CL:0000049!4.77e-53!112;CL:0002032!1.37e-50!165;CL:0000837!1.37e-50!165;CL:0000988!5.77e-49!182;CL:0000766!4.42e-47!76;CL:0000738!2.08e-46!140;CL:0002009!5.27e-46!65;CL:0002194!2.42e-44!63;CL:0000576!2.42e-44!63;CL:0000040!2.42e-44!63;CL:0000559!2.42e-44!63;CL:0000557!7.87e-41!71;CL:0000839!1.07e-40!70;CL:0002057!1.91e-40!42;CL:0002087!5.32e-40!119;CL:0002031!3.66e-38!124;CL:0000860!2.48e-36!45;CL:0002393!5.15e-10!9;CL:0002397!5.15e-10!9;CL:0000094!4.82e-08!8;CL:0000134!2.02e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.05e-54!172;CL:0000566!1.05e-54!172;CL:0000763!4.77e-53!112;CL:0000049!4.77e-53!112;CL:0002032!1.37e-50!165;CL:0000837!1.37e-50!165;CL:0000988!5.77e-49!182;CL:0000766!4.42e-47!76;CL:0000738!2.08e-46!140;CL:0002009!5.27e-46!65;CL:0002194!2.42e-44!63;CL:0000576!2.42e-44!63;CL:0000040!2.42e-44!63;CL:0000559!2.42e-44!63;CL:0000557!7.87e-41!71;CL:0000839!1.07e-40!70;CL:0002057!1.91e-40!42;CL:0002087!5.32e-40!119;CL:0002031!3.66e-38!124;CL:0000860!2.48e-36!45;CL:0002393!5.15e-10!9;CL:0002397!5.15e-10!9;CL:0000094!4.82e-08!8;CL:0000134!2.02e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.02e-37;33!CL:0002057;8.02e-37;33!CL:0000473;7.12e-36;39!CL:0000234;7.12e-36;39!CL:0000576;1.74e-35;48!CL:0000766;3.77e-27;69!CL:0000763;2.42e-19;100!CL:0000738;2.63e-12;136!CL:0002087;4.24e-12;104!CL:0000094;6.38e-10;8!CL:0000988;2.44e-09;177!CL:0002393;1.30e-08;6!CL:0002397;1.30e-08;6!CL:0000235;1.67e-07;6!CL:0000840;8.11e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;8.02e-37;33!CL:0002057;8.02e-37;33!CL:0000473;7.12e-36;39!CL:0000234;7.12e-36;39!CL:0000576;1.74e-35;48!CL:0000766;3.77e-27;69!CL:0000763;2.42e-19;100!CL:0000738;2.63e-12;136!CL:0002087;4.24e-12;104!CL:0000094;6.38e-10;8!CL:0000988;2.44e-09;177!CL:0002393;1.30e-08;6!CL:0002397;1.30e-08;6!CL:0000235;1.67e-07;6!CL:0000840;8.11e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.89e-66,72;CL:0002009,9.54e-66,61;CL:0002194,1.41e-63,59;CL:0000576,1.41e-63,59;CL:0000040,1.41e-63,59;CL:0000559,1.41e-63,59;CL:0000763,1.45e-62,108;CL:0000049,1.45e-62,108;CL:0000473,4.37e-58,48;CL:0000234,4.37e-58,48;CL:0000557,9.12e-58,67;CL:0000037,6.66e-55,168;CL:0000839,1.95e-54,66;CL:0000860,8.06e-52,42;CL:0002057,8.06e-52,42;CL:0000988,2.81e-50,177;CL:0000738,3.24e-50,136;CL:0002032,7.19e-50,161;CL:0000837,7.19e-50,161;CL:0002087,3.65e-44,115;CL:0002031,1.28e-39,120;CL:0002393,1.82e-12,9;CL:0002397,1.82e-12,9;CL:0000134,6.05e-10,354;CL:0000094,6.31e-10,8;CL:0002320,3.13e-09,361;CL:0000235,1.69e-07,6;CL:0000219,7.94e-07,386;CL:0000840,8.64e-07,5;CL:0001029,8.64e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-37;42!CL:0000049;9.20e-17;108 | |ontology_enrichment_development_v019=CL:0002057;4.90e-37;42!CL:0000049;9.20e-17;108 | ||
|ontology_enrichment_disease=DOID:8692!2.42e-08!31 | |ontology_enrichment_disease=DOID:8692!2.42e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.27e-07;31 | |ontology_enrichment_disease_v019=DOID:8692;7.27e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.76e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-42!102;UBERON:0003061!1.28e-42!102;UBERON:0002193!4.39e-39!112;UBERON:0002371!1.19e-34!80;UBERON:0007023!3.70e-34!115;UBERON:0001474!2.35e-30!86;UBERON:0002405!4.66e-26!115;UBERON:0004765!7.10e-23!101;UBERON:0001434!7.10e-23!101;UBERON:0001049!1.24e-15!57;UBERON:0005068!1.24e-15!57;UBERON:0006241!1.24e-15!57;UBERON:0007135!1.24e-15!57;UBERON:0003080!5.62e-12!42;UBERON:0002616!8.91e-12!59;UBERON:0002780!1.13e-11!41;UBERON:0001890!1.13e-11!41;UBERON:0006240!1.13e-11!41;UBERON:0001893!9.70e-10!34;UBERON:0002020!9.80e-10!34;UBERON:0003528!9.80e-10!34;UBERON:0003081!1.12e-09!216;UBERON:0002791!2.13e-09!33;UBERON:0001017!2.29e-09!82;UBERON:0000955!2.98e-09!69;UBERON:0006238!2.98e-09!69;UBERON:0005743!8.31e-09!86;UBERON:0001869!1.05e-08!32;UBERON:0003075!2.69e-08!86;UBERON:0007284!2.69e-08!86;UBERON:0002204!6.95e-08!167;UBERON:0000178!1.31e-07!15;UBERON:0000179!1.31e-07!15;UBERON:0000463!1.31e-07!15;UBERON:0002346!2.35e-07!90;UBERON:0002619!2.65e-07!22;UBERON:0000073!9.35e-07!94;UBERON:0001016!9.35e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!1.28e-42!102;UBERON:0003061!1.28e-42!102;UBERON:0002193!4.39e-39!112;UBERON:0002371!1.19e-34!80;UBERON:0007023!3.70e-34!115;UBERON:0001474!2.35e-30!86;UBERON:0002405!4.66e-26!115;UBERON:0004765!7.10e-23!101;UBERON:0001434!7.10e-23!101;UBERON:0001049!1.24e-15!57;UBERON:0005068!1.24e-15!57;UBERON:0006241!1.24e-15!57;UBERON:0007135!1.24e-15!57;UBERON:0003080!5.62e-12!42;UBERON:0002616!8.91e-12!59;UBERON:0002780!1.13e-11!41;UBERON:0001890!1.13e-11!41;UBERON:0006240!1.13e-11!41;UBERON:0001893!9.70e-10!34;UBERON:0002020!9.80e-10!34;UBERON:0003528!9.80e-10!34;UBERON:0003081!1.12e-09!216;UBERON:0002791!2.13e-09!33;UBERON:0001017!2.29e-09!82;UBERON:0000955!2.98e-09!69;UBERON:0006238!2.98e-09!69;UBERON:0005743!8.31e-09!86;UBERON:0001869!1.05e-08!32;UBERON:0003075!2.69e-08!86;UBERON:0007284!2.69e-08!86;UBERON:0002204!6.95e-08!167;UBERON:0000178!1.31e-07!15;UBERON:0000179!1.31e-07!15;UBERON:0000463!1.31e-07!15;UBERON:0002346!2.35e-07!90;UBERON:0002619!2.65e-07!22;UBERON:0000073!9.35e-07!94;UBERON:0001016!9.35e-07!94 | ||
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|short_description=p2@LST1 | |short_description=p2@LST1 | ||
}} | }} |
Latest revision as of 22:05, 17 September 2015
Short description: | p2@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000460834_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-58 | 98 |
blood island | 1.09e-58 | 98 |
hemolymphoid system | 1.12e-53 | 108 |
bone marrow | 4.42e-50 | 76 |
bone element | 1.04e-44 | 82 |
immune system | 4.54e-44 | 93 |
skeletal element | 1.11e-38 | 90 |
skeletal system | 1.29e-33 | 100 |
adult organism | 7.27e-19 | 114 |
lateral plate mesoderm | 8.29e-18 | 203 |
neural tube | 1.02e-13 | 56 |
neural rod | 1.02e-13 | 56 |
future spinal cord | 1.02e-13 | 56 |
neural keel | 1.02e-13 | 56 |
musculoskeletal system | 6.93e-13 | 167 |
regional part of nervous system | 5.86e-12 | 53 |
regional part of brain | 5.86e-12 | 53 |
regional part of forebrain | 2.03e-10 | 41 |
forebrain | 2.03e-10 | 41 |
anterior neural tube | 2.03e-10 | 41 |
future forebrain | 2.03e-10 | 41 |
blood | 7.66e-10 | 15 |
haemolymphatic fluid | 7.66e-10 | 15 |
organism substance | 7.66e-10 | 15 |
telencephalon | 1.65e-09 | 34 |
brain grey matter | 1.67e-09 | 34 |
gray matter | 1.67e-09 | 34 |
connective tissue | 1.25e-08 | 371 |
regional part of telencephalon | 1.70e-08 | 32 |
cerebral hemisphere | 2.73e-08 | 32 |
central nervous system | 3.73e-08 | 81 |
brain | 7.48e-08 | 68 |
future brain | 7.48e-08 | 68 |
neural nucleus | 3.29e-07 | 9 |
nucleus of brain | 3.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.76e-07 | 31 |