FFCP PHASE1:Hg19::chr8:29940475..29940486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51669 | |EntrezGene=51669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28789 | |HGNC=28789 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJV6,B7Z9J1 | |UniProt=E5RJV6,B7Z9J1 | ||
|association_with_transcript=0bp_to_ENST00000517569,ENST00000518340,ENST00000536273_5end | |association_with_transcript=0bp_to_ENST00000517569,ENST00000518340,ENST00000536273_5end | ||
|cluster_id=chr8:29940475..29940486,- | |||
|description=CAGE_peak_4_at_TMEM66_5end | |description=CAGE_peak_4_at_TMEM66_5end | ||
|id=chr8:29940475..29940486,- | |id=chr8:29940475..29940486,- | ||
|ontology_enrichment_celltype=CL:0000738!7.94e-26!140;CL:0000037!8.90e-21!172;CL:0000566!8.90e-21!172;CL:0002031!1.52e-20!124;CL:0000766!9.54e-19!76;CL:0002032!1.17e-18!165;CL:0000837!1.17e-18!165;CL:0002087!1.45e-18!119;CL:0000988!3.19e-18!182;CL:0000557!2.37e-16!71;CL:0000839!6.20e-15!70;CL:0002009!3.28e-14!65;CL:0000763!1.46e-13!112;CL:0000049!1.46e-13!112;CL:0002194!3.11e-13!63;CL:0000576!3.11e-13!63;CL:0000040!3.11e-13!63;CL:0000559!3.11e-13!63;CL:0002057!5.05e-12!42;CL:0000860!9.35e-12!45;CL:0000791!1.10e-09!18;CL:0000789!1.10e-09!18;CL:0002420!1.10e-09!18;CL:0002419!1.10e-09!18;CL:0000790!1.10e-09!18;CL:0000625!3.73e-07!11 | |ontology_enrichment_celltype=CL:0000738!7.94e-26!140;CL:0000037!8.90e-21!172;CL:0000566!8.90e-21!172;CL:0002031!1.52e-20!124;CL:0000766!9.54e-19!76;CL:0002032!1.17e-18!165;CL:0000837!1.17e-18!165;CL:0002087!1.45e-18!119;CL:0000988!3.19e-18!182;CL:0000557!2.37e-16!71;CL:0000839!6.20e-15!70;CL:0002009!3.28e-14!65;CL:0000763!1.46e-13!112;CL:0000049!1.46e-13!112;CL:0002194!3.11e-13!63;CL:0000576!3.11e-13!63;CL:0000040!3.11e-13!63;CL:0000559!3.11e-13!63;CL:0002057!5.05e-12!42;CL:0000860!9.35e-12!45;CL:0000791!1.10e-09!18;CL:0000789!1.10e-09!18;CL:0002420!1.10e-09!18;CL:0002419!1.10e-09!18;CL:0000790!1.10e-09!18;CL:0000625!3.73e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.06e-10;18!CL:0000789;8.06e-10;18!CL:0002419;8.06e-10;18!CL:0000766;2.30e-08;69!CL:0000860;3.44e-08;33!CL:0002057;3.44e-08;33!CL:0000473;4.23e-08;39!CL:0000234;4.23e-08;39!CL:0000625;3.37e-07;11!CL:0000576;4.14e-07;48 | |ontology_enrichment_celltype_v019=CL:0000791;8.06e-10;18!CL:0000789;8.06e-10;18!CL:0002419;8.06e-10;18!CL:0000766;2.30e-08;69!CL:0000860;3.44e-08;33!CL:0002057;3.44e-08;33!CL:0000473;4.23e-08;39!CL:0000234;4.23e-08;39!CL:0000625;3.37e-07;11!CL:0000576;4.14e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-25,136;CL:0000037,1.59e-20,168;CL:0002031,2.14e-20,120;CL:0000766,6.96e-19,72;CL:0000988,1.60e-18,177;CL:0002032,2.07e-18,161;CL:0000837,2.07e-18,161;CL:0002087,2.08e-18,115;CL:0000557,1.85e-16,67;CL:0000839,5.27e-15,66;CL:0002009,2.69e-14,61;CL:0000763,1.95e-13,108;CL:0000049,1.95e-13,108;CL:0002194,2.66e-13,59;CL:0000576,2.66e-13,59;CL:0000040,2.66e-13,59;CL:0000559,2.66e-13,59;CL:0000473,4.27e-13,48;CL:0000234,4.27e-13,48;CL:0000860,5.01e-12,42;CL:0002057,5.01e-12,42;CL:0000791,1.09e-09,18;CL:0000789,1.09e-09,18;CL:0002420,1.09e-09,18;CL:0002419,1.09e-09,18;CL:0000790,1.09e-09,18;CL:0000625,3.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.06e-10;18!CL:0002057;5.17e-09;42 | |ontology_enrichment_development_v019=CL:0000790;8.06e-10;18!CL:0002057;5.17e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.20e-17!102;UBERON:0003061!7.20e-17!102;UBERON:0007023!4.55e-15!115;UBERON:0002371!2.69e-14!80;UBERON:0002193!1.06e-13!112;UBERON:0002780!2.95e-13!41;UBERON:0001890!2.95e-13!41;UBERON:0006240!2.95e-13!41;UBERON:0003080!5.25e-13!42;UBERON:0001049!8.38e-13!57;UBERON:0005068!8.38e-13!57;UBERON:0006241!8.38e-13!57;UBERON:0007135!8.38e-13!57;UBERON:0001869!1.67e-12!32;UBERON:0001474!2.72e-12!86;UBERON:0001893!5.06e-12!34;UBERON:0002619!1.28e-11!22;UBERON:0002020!1.52e-11!34;UBERON:0003528!1.52e-11!34;UBERON:0002791!1.89e-11!33;UBERON:0001950!1.19e-10!20;UBERON:0002616!3.60e-10!59;UBERON:0000956!2.58e-09!25;UBERON:0000203!2.58e-09!25;UBERON:0004765!3.75e-09!101;UBERON:0001434!3.75e-09!101;UBERON:0000955!8.53e-09!69;UBERON:0006238!8.53e-09!69;UBERON:0001017!9.38e-09!82;UBERON:0002405!2.09e-08!115;UBERON:0005743!3.59e-08!86;UBERON:0000073!9.79e-07!94;UBERON:0001016!9.79e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!7.20e-17!102;UBERON:0003061!7.20e-17!102;UBERON:0007023!4.55e-15!115;UBERON:0002371!2.69e-14!80;UBERON:0002193!1.06e-13!112;UBERON:0002780!2.95e-13!41;UBERON:0001890!2.95e-13!41;UBERON:0006240!2.95e-13!41;UBERON:0003080!5.25e-13!42;UBERON:0001049!8.38e-13!57;UBERON:0005068!8.38e-13!57;UBERON:0006241!8.38e-13!57;UBERON:0007135!8.38e-13!57;UBERON:0001869!1.67e-12!32;UBERON:0001474!2.72e-12!86;UBERON:0001893!5.06e-12!34;UBERON:0002619!1.28e-11!22;UBERON:0002020!1.52e-11!34;UBERON:0003528!1.52e-11!34;UBERON:0002791!1.89e-11!33;UBERON:0001950!1.19e-10!20;UBERON:0002616!3.60e-10!59;UBERON:0000956!2.58e-09!25;UBERON:0000203!2.58e-09!25;UBERON:0004765!3.75e-09!101;UBERON:0001434!3.75e-09!101;UBERON:0000955!8.53e-09!69;UBERON:0006238!8.53e-09!69;UBERON:0001017!9.38e-09!82;UBERON:0002405!2.09e-08!115;UBERON:0005743!3.59e-08!86;UBERON:0000073!9.79e-07!94;UBERON:0001016!9.79e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.30e-11;32!UBERON:0002619;1.43e-11;22!UBERON:0002791;6.86e-11;32!UBERON:0001893;7.50e-11;34!UBERON:0001950;1.33e-10;20!UBERON:0003528;1.69e-10;34!UBERON:0002020;1.69e-10;34!UBERON:0002780;7.47e-10;41!UBERON:0001890;7.47e-10;41!UBERON:0000956;1.75e-09;25!UBERON:0000203;1.75e-09;25!UBERON:0000073;2.61e-07;53!UBERON:0002616;2.61e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.30e-11;32!UBERON:0002619;1.43e-11;22!UBERON:0002791;6.86e-11;32!UBERON:0001893;7.50e-11;34!UBERON:0001950;1.33e-10;20!UBERON:0003528;1.69e-10;34!UBERON:0002020;1.69e-10;34!UBERON:0002780;7.47e-10;41!UBERON:0001890;7.47e-10;41!UBERON:0000956;1.75e-09;25!UBERON:0000203;1.75e-09;25!UBERON:0000073;2.61e-07;53!UBERON:0002616;2.61e-07;53 | ||
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| ||
|short_description=p4@TMEM66 | |short_description=p4@TMEM66 | ||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p4@TMEM66 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM66_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517569, ENST00000518340, ENST00000536273_5end |
EntrezGene: | TMEM66 |
HGNC: | 28789 |
UniProt: | E5RJV6B7Z9J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.11e-25 | 136 |
hematopoietic stem cell | 1.59e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 2.14e-20 | 120 |
myeloid leukocyte | 6.96e-19 | 72 |
hematopoietic cell | 1.60e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.07e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-18 | 161 |
nongranular leukocyte | 2.08e-18 | 115 |
granulocyte monocyte progenitor cell | 1.85e-16 | 67 |
myeloid lineage restricted progenitor cell | 5.27e-15 | 66 |
macrophage dendritic cell progenitor | 2.69e-14 | 61 |
myeloid cell | 1.95e-13 | 108 |
common myeloid progenitor | 1.95e-13 | 108 |
monopoietic cell | 2.66e-13 | 59 |
monocyte | 2.66e-13 | 59 |
monoblast | 2.66e-13 | 59 |
promonocyte | 2.66e-13 | 59 |
defensive cell | 4.27e-13 | 48 |
phagocyte | 4.27e-13 | 48 |
classical monocyte | 5.01e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.01e-12 | 42 |
mature alpha-beta T cell | 1.09e-09 | 18 |
alpha-beta T cell | 1.09e-09 | 18 |
immature T cell | 1.09e-09 | 18 |
mature T cell | 1.09e-09 | 18 |
immature alpha-beta T cell | 1.09e-09 | 18 |
CD8-positive, alpha-beta T cell | 3.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.37e-17 | 98 |
blood island | 7.37e-17 | 98 |
adult organism | 1.02e-14 | 114 |
bone marrow | 2.50e-14 | 76 |
hemolymphoid system | 1.41e-13 | 108 |
regional part of forebrain | 2.92e-13 | 41 |
forebrain | 2.92e-13 | 41 |
anterior neural tube | 2.92e-13 | 41 |
future forebrain | 2.92e-13 | 41 |
neural tube | 5.53e-13 | 56 |
neural rod | 5.53e-13 | 56 |
future spinal cord | 5.53e-13 | 56 |
neural keel | 5.53e-13 | 56 |
regional part of nervous system | 1.28e-12 | 53 |
regional part of brain | 1.28e-12 | 53 |
cerebral hemisphere | 1.66e-12 | 32 |
bone element | 2.97e-12 | 82 |
telencephalon | 5.02e-12 | 34 |
regional part of cerebral cortex | 1.27e-11 | 22 |
brain grey matter | 1.51e-11 | 34 |
gray matter | 1.51e-11 | 34 |
regional part of telencephalon | 1.76e-11 | 32 |
neocortex | 1.18e-10 | 20 |
skeletal element | 3.56e-10 | 90 |
immune system | 6.85e-10 | 93 |
cerebral cortex | 2.56e-09 | 25 |
pallium | 2.56e-09 | 25 |
brain | 6.70e-09 | 68 |
future brain | 6.70e-09 | 68 |
central nervous system | 7.67e-09 | 81 |
skeletal system | 6.52e-08 | 100 |
nervous system | 2.98e-07 | 89 |