FFCP PHASE1:Hg19::chr8:29940544..29940555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51669 | |EntrezGene=51669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28789 | |HGNC=28789 | ||
|TSSclassifier=strong | |||
|UniProt=E5RK43 | |UniProt=E5RK43 | ||
|association_with_transcript=3bp_to_ENST00000521083_5end | |association_with_transcript=3bp_to_ENST00000521083_5end | ||
|cluster_id=chr8:29940544..29940555,- | |||
|coexpression_cluster_id=C443 | |coexpression_cluster_id=C443 | ||
|description=CAGE_peak_3_at_TMEM66_5end | |description=CAGE_peak_3_at_TMEM66_5end | ||
|id=chr8:29940544..29940555,- | |id=chr8:29940544..29940555,- | ||
|ontology_enrichment_celltype=CL:0000738!1.03e-28!140;CL:0002031!7.70e-22!124;CL:0000037!8.77e-22!172;CL:0000566!8.77e-22!172;CL:0000766!4.13e-21!76;CL:0002087!1.51e-20!119;CL:0002032!4.10e-19!165;CL:0000837!4.10e-19!165;CL:0000988!4.89e-19!182;CL:0000557!7.17e-18!71;CL:0000839!3.63e-16!70;CL:0002057!1.61e-15!42;CL:0002009!1.89e-15!65;CL:0002194!1.33e-14!63;CL:0000576!1.33e-14!63;CL:0000040!1.33e-14!63;CL:0000559!1.33e-14!63;CL:0000860!6.26e-14!45;CL:0000763!1.40e-13!112;CL:0000049!1.40e-13!112;CL:0000791!1.47e-10!18;CL:0000789!1.47e-10!18;CL:0002420!1.47e-10!18;CL:0002419!1.47e-10!18;CL:0000790!1.47e-10!18;CL:0000625!1.59e-07!11;CL:0000084!1.87e-07!25;CL:0000827!1.87e-07!25 | |ontology_enrichment_celltype=CL:0000738!1.03e-28!140;CL:0002031!7.70e-22!124;CL:0000037!8.77e-22!172;CL:0000566!8.77e-22!172;CL:0000766!4.13e-21!76;CL:0002087!1.51e-20!119;CL:0002032!4.10e-19!165;CL:0000837!4.10e-19!165;CL:0000988!4.89e-19!182;CL:0000557!7.17e-18!71;CL:0000839!3.63e-16!70;CL:0002057!1.61e-15!42;CL:0002009!1.89e-15!65;CL:0002194!1.33e-14!63;CL:0000576!1.33e-14!63;CL:0000040!1.33e-14!63;CL:0000559!1.33e-14!63;CL:0000860!6.26e-14!45;CL:0000763!1.40e-13!112;CL:0000049!1.40e-13!112;CL:0000791!1.47e-10!18;CL:0000789!1.47e-10!18;CL:0002420!1.47e-10!18;CL:0002419!1.47e-10!18;CL:0000790!1.47e-10!18;CL:0000625!1.59e-07!11;CL:0000084!1.87e-07!25;CL:0000827!1.87e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.53e-10;18!CL:0000789;1.53e-10;18!CL:0002419;1.53e-10;18!CL:0000860;1.98e-10;33!CL:0002057;1.98e-10;33!CL:0000576;2.56e-10;48!CL:0000766;3.33e-10;69!CL:0000473;5.41e-09;39!CL:0000234;5.41e-09;39!CL:0000625;1.20e-07;11!CL:0000084;1.60e-07;25!CL:0002087;5.48e-07;104!CL:0000738;6.20e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.61e-29,136;CL:0002031,1.53e-22,120;CL:0000766,2.13e-22,72;CL:0000037,2.78e-22,168;CL:0002087,3.08e-21,115;CL:0000988,1.24e-19,177;CL:0002032,1.42e-19,161;CL:0000837,1.42e-19,161;CL:0000557,4.82e-19,67;CL:0000839,3.02e-17,66;CL:0002009,1.47e-16,61;CL:0002194,1.10e-15,59;CL:0000576,1.10e-15,59;CL:0000040,1.10e-15,59;CL:0000559,1.10e-15,59;CL:0000473,1.24e-15,48;CL:0000234,1.24e-15,48;CL:0000860,1.54e-15,42;CL:0002057,1.54e-15,42;CL:0000763,3.56e-14,108;CL:0000049,3.56e-14,108;CL:0000791,1.42e-10,18;CL:0000789,1.42e-10,18;CL:0002420,1.42e-10,18;CL:0002419,1.42e-10,18;CL:0000790,1.42e-10,18;CL:0000625,1.56e-07,11;CL:0000084,1.83e-07,25;CL:0000827,1.83e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-11;42!CL:0000790;1.53e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-32!115;UBERON:0002390!9.37e-19!102;UBERON:0003061!9.37e-19!102;UBERON:0002193!5.47e-18!112;UBERON:0001049!9.51e-17!57;UBERON:0005068!9.51e-17!57;UBERON:0006241!9.51e-17!57;UBERON:0007135!9.51e-17!57;UBERON:0002780!6.95e-14!41;UBERON:0001890!6.95e-14!41;UBERON:0006240!6.95e-14!41;UBERON:0002616!7.09e-14!59;UBERON:0003080!7.72e-14!42;UBERON:0002371!1.10e-13!80;UBERON:0001017!2.62e-12!82;UBERON:0001474!4.02e-12!86;UBERON:0000955!4.44e-12!69;UBERON:0006238!4.44e-12!69;UBERON:0002020!1.77e-11!34;UBERON:0003528!1.77e-11!34;UBERON:0005743!1.84e-11!86;UBERON:0001893!2.66e-11!34;UBERON:0002791!7.13e-11!33;UBERON:0001869!9.06e-11!32;UBERON:0000073!1.23e-10!94;UBERON:0001016!1.23e-10!94;UBERON:0002405!3.39e-10!115;UBERON:0002619!8.43e-10!22;UBERON:0004765!1.46e-09!101;UBERON:0001434!1.46e-09!101;UBERON:0001950!6.76e-09!20;UBERON:0000956!3.69e-08!25;UBERON:0000203!3.69e-08!25;UBERON:0003075!1.47e-07!86;UBERON:0007284!1.47e-07!86;UBERON:0000178!8.16e-07!15;UBERON:0000179!8.16e-07!15;UBERON:0000463!8.16e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!3.02e-32!115;UBERON:0002390!9.37e-19!102;UBERON:0003061!9.37e-19!102;UBERON:0002193!5.47e-18!112;UBERON:0001049!9.51e-17!57;UBERON:0005068!9.51e-17!57;UBERON:0006241!9.51e-17!57;UBERON:0007135!9.51e-17!57;UBERON:0002780!6.95e-14!41;UBERON:0001890!6.95e-14!41;UBERON:0006240!6.95e-14!41;UBERON:0002616!7.09e-14!59;UBERON:0003080!7.72e-14!42;UBERON:0002371!1.10e-13!80;UBERON:0001017!2.62e-12!82;UBERON:0001474!4.02e-12!86;UBERON:0000955!4.44e-12!69;UBERON:0006238!4.44e-12!69;UBERON:0002020!1.77e-11!34;UBERON:0003528!1.77e-11!34;UBERON:0005743!1.84e-11!86;UBERON:0001893!2.66e-11!34;UBERON:0002791!7.13e-11!33;UBERON:0001869!9.06e-11!32;UBERON:0000073!1.23e-10!94;UBERON:0001016!1.23e-10!94;UBERON:0002405!3.39e-10!115;UBERON:0002619!8.43e-10!22;UBERON:0004765!1.46e-09!101;UBERON:0001434!1.46e-09!101;UBERON:0001950!6.76e-09!20;UBERON:0000956!3.69e-08!25;UBERON:0000203!3.69e-08!25;UBERON:0003075!1.47e-07!86;UBERON:0007284!1.47e-07!86;UBERON:0000178!8.16e-07!15;UBERON:0000179!8.16e-07!15;UBERON:0000463!8.16e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.33e-10;41!UBERON:0001890;2.33e-10;41!UBERON:0003528;4.86e-10;34!UBERON:0002020;4.86e-10;34!UBERON:0001869;6.00e-10;32!UBERON:0001893;6.75e-10;34!UBERON:0002619;6.76e-10;22!UBERON:0002791;7.84e-10;32!UBERON:0000073;1.16e-09;53!UBERON:0002616;1.16e-09;53!UBERON:0001950;5.51e-09;20!UBERON:0007023;8.99e-09;114!UBERON:0000956;2.60e-08;25!UBERON:0000203;2.60e-08;25!UBERON:0000178;7.77e-07;15!UBERON:0000179;7.77e-07;15!UBERON:0000463;7.77e-07;15 | |||
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| ||
|short_description=p3@TMEM66 | |short_description=p3@TMEM66 | ||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p3@TMEM66 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM66_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | 3bp_to_ENST00000521083_5end |
EntrezGene: | TMEM66 |
HGNC: | 28789 |
UniProt: | E5RK43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.61e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 1.53e-22 | 120 |
myeloid leukocyte | 2.13e-22 | 72 |
hematopoietic stem cell | 2.78e-22 | 168 |
nongranular leukocyte | 3.08e-21 | 115 |
hematopoietic cell | 1.24e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.42e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-19 | 161 |
granulocyte monocyte progenitor cell | 4.82e-19 | 67 |
myeloid lineage restricted progenitor cell | 3.02e-17 | 66 |
macrophage dendritic cell progenitor | 1.47e-16 | 61 |
monopoietic cell | 1.10e-15 | 59 |
monocyte | 1.10e-15 | 59 |
monoblast | 1.10e-15 | 59 |
promonocyte | 1.10e-15 | 59 |
defensive cell | 1.24e-15 | 48 |
phagocyte | 1.24e-15 | 48 |
classical monocyte | 1.54e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.54e-15 | 42 |
myeloid cell | 3.56e-14 | 108 |
common myeloid progenitor | 3.56e-14 | 108 |
mature alpha-beta T cell | 1.42e-10 | 18 |
alpha-beta T cell | 1.42e-10 | 18 |
immature T cell | 1.42e-10 | 18 |
mature T cell | 1.42e-10 | 18 |
immature alpha-beta T cell | 1.42e-10 | 18 |
CD8-positive, alpha-beta T cell | 1.56e-07 | 11 |
T cell | 1.83e-07 | 25 |
pro-T cell | 1.83e-07 | 25 |