FFCP PHASE1:Hg19::chr19:39897051..39897070,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:39897051..39897070,+
|short_description=p3@ZFP36
|description=CAGE_peak_3_at_ZFP36_5end
|association_with_transcript=-416bp_to_ENST00000248673,NM_003407,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7538 | |EntrezGene=7538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12862 | |HGNC=12862 | ||
|TSSclassifier=strong | |||
|UniProt=P26651 | |UniProt=P26651 | ||
|association_with_transcript=-416bp_to_ENST00000248673,NM_003407,uc002olh.1_5end | |||
|cluster_id=chr19:39897051..39897070,+ | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_3_at_ZFP36_5end | |||
|id=chr19:39897051..39897070,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.74e-42!140;CL:0000037!1.06e-37!172;CL:0000566!1.06e-37!172;CL:0002057!3.28e-37!42;CL:0000988!7.98e-37!182;CL:0000766!3.61e-36!76;CL:0000860!6.25e-36!45;CL:0002032!2.68e-33!165;CL:0000837!2.68e-33!165;CL:0002031!1.18e-31!124;CL:0000763!1.23e-29!112;CL:0000049!1.23e-29!112;CL:0002087!3.07e-28!119;CL:0000839!7.58e-28!70;CL:0000557!1.30e-27!71;CL:0002009!8.95e-26!65;CL:0002194!1.63e-23!63;CL:0000576!1.63e-23!63;CL:0000040!1.63e-23!63;CL:0000559!1.63e-23!63;CL:0000094!1.38e-14!8;CL:0000081!2.02e-12!11;CL:0000134!4.93e-12!358;CL:0002320!2.22e-11!365;CL:0002393!3.40e-11!9;CL:0002397!3.40e-11!9;CL:0000219!4.01e-09!390;CL:0000048!6.50e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.40e-33;8!CL:0000860;7.97e-30;33!CL:0002057;7.97e-30;33!CL:0000081;1.23e-23;11!CL:0000766;2.89e-22;69!CL:0000473;8.11e-21;39!CL:0000234;8.11e-21;39!CL:0000576;1.60e-18;48!CL:0000775;8.36e-14;3!CL:0000226;7.39e-13;3!CL:0000767;7.39e-13;3!CL:0000842;7.39e-13;3!CL:0002087;1.87e-12;104!CL:0000763;1.46e-11;100!CL:0000738;6.26e-11;136!CL:0000771;7.67e-10;2!CL:0000988;8.70e-09;177!CL:0000097;6.77e-08;5!CL:0000791;9.28e-08;18!CL:0000789;9.28e-08;18!CL:0002419;9.28e-08;18!CL:0002393;2.07e-07;6!CL:0002397;2.07e-07;6!CL:0000624;6.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.99e-58,136;CL:0000766,8.26e-52,72;CL:0000037,1.26e-45,168;CL:0000988,7.44e-43,177;CL:0002032,4.73e-39,161;CL:0000837,4.73e-39,161;CL:0000860,1.59e-35,42;CL:0002057,1.59e-35,42;CL:0000763,1.72e-34,108;CL:0000049,1.72e-34,108;CL:0002031,2.95e-34,120;CL:0002087,8.52e-34,115;CL:0000094,3.75e-33,8;CL:0000557,1.79e-32,67;CL:0000473,1.85e-30,48;CL:0000234,1.85e-30,48;CL:0000839,2.95e-30,66;CL:0002009,1.55e-27,61;CL:0002194,6.45e-26,59;CL:0000576,6.45e-26,59;CL:0000040,6.45e-26,59;CL:0000559,6.45e-26,59;CL:0000081,9.46e-24,11;CL:0000134,8.13e-17,354;CL:0002320,2.63e-16,361;CL:0000219,1.64e-14,386;CL:0000775,6.22e-14,3;CL:0000226,7.42e-13,3;CL:0000842,7.42e-13,3;CL:0000767,8.74e-13,3;CL:0000034,1.84e-12,441;CL:0000048,2.57e-12,427;CL:0000723,5.18e-12,433;CL:0000771,5.93e-10,2;CL:0000097,7.48e-08,5;CL:0002028,7.48e-08,5;CL:0000791,9.49e-08,18;CL:0000789,9.49e-08,18;CL:0002420,9.49e-08,18;CL:0002419,9.49e-08,18;CL:0000790,9.49e-08,18;CL:0000624,5.07e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.56e-26;42!CL:0000049;9.03e-08;108!CL:0000790;9.28e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.16e-30!102;UBERON:0003061!4.16e-30!102;UBERON:0002193!4.30e-27!112;UBERON:0002371!4.38e-23!80;UBERON:0001474!1.31e-20!86;UBERON:0002405!2.34e-18!115;UBERON:0004765!8.78e-17!101;UBERON:0001434!8.78e-17!101;UBERON:0002384!5.56e-11!375;UBERON:0003081!7.01e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.87e-28,76;UBERON:0002390,2.27e-26,98;UBERON:0003061,2.27e-26,98;UBERON:0001474,1.71e-25,82;UBERON:0002193,2.49e-23,108;UBERON:0004765,1.03e-22,90;UBERON:0002405,8.55e-22,93;UBERON:0001434,7.30e-20,100;UBERON:0002384,1.30e-15,371;UBERON:0002204,1.35e-09,167;UBERON:0003081,2.05e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,1.18009283054671,1.53531759238885,2.16742572642506,0,0,0,0,0,0,4.9859586767869,7.01905566145496,7.16135873362311,0,0,0,0.581592955118259,0,0.727752183563449,1.16214518452842,0.411167888021826,1.54853185447552,2.3015391385772,1.5369642391746,2.12834006899727,2.06847408441971,0.645484683583826,1.35426486594342,1.88242339542605,0.545812300115692,0,2.14258724659632,1.28371610830437,2.55734850319616,2.96866170168044,2.19410023383795,2.98357325372886,0.870627715885752,0,0,2.26123798731069,0.521482918420201,3.47502151528187,0,1.84138817993782,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0,0,0,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,1.76171156811282,0.764546456250458,0,1.12101712596307,0,1.7703879310245,3.14408610199332,2.67281948699362,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,1.41124720257313,2.13952156626806,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,2.01767934783746,1.51490920111656,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,3.45004119775228,1.02674429023799,0,0,0,0,0,2.24702107184155,2.99161459204025,3.31532410748828,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.24060815673732,1.94142780736755,2.02782359826544,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,1.5748172408605,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,1.18009283054671,1.53531759238885,2.16742572642506,0,0,0,0,0,0,4.9859586767869,7.01905566145496,7.16135873362311,0,0,0,0.581592955118259,0,0.727752183563449,1.16214518452842,0.411167888021826,1.54853185447552,2.3015391385772,1.5369642391746,2.12834006899727,2.06847408441971,0.645484683583826,1.35426486594342,1.88242339542605,0.545812300115692,0,2.14258724659632,1.28371610830437,2.55734850319616,2.96866170168044,2.19410023383795,2.98357325372886,0.870627715885752,0,0,2.26123798731069,0.521482918420201,3.47502151528187,0,1.84138817993782,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0,0,0,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,1.76171156811282,0.764546456250458,0,1.12101712596307,0,1.7703879310245,3.14408610199332,2.67281948699362,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,1.41124720257313,2.13952156626806,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.43094374583205,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,2.01767934783746,1.51490920111656,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,3.45004119775228,1.02674429023799,0,0,0,0,0,2.24702107184155,2.99161459204025,3.31532410748828,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.24060815673732,1.94142780736755,2.02782359826544,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,1.5748172408605,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ZFP36 | |||
}} | }} |
Latest revision as of 22:53, 17 September 2015
Short description: | p3@ZFP36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZFP36_5end |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | -416bp_to_ENST00000248673, NM_003407, uc002olh.1_5end |
EntrezGene: | ZFP36 |
HGNC: | 12862 |
UniProt: | P26651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.87e-28 | 76 |
hematopoietic system | 2.27e-26 | 98 |
blood island | 2.27e-26 | 98 |
bone element | 1.71e-25 | 82 |
hemolymphoid system | 2.49e-23 | 108 |
skeletal element | 1.03e-22 | 90 |
immune system | 8.55e-22 | 93 |
skeletal system | 7.30e-20 | 100 |
connective tissue | 1.30e-15 | 371 |
musculoskeletal system | 1.35e-09 | 167 |
lateral plate mesoderm | 2.05e-09 | 203 |