FFCP PHASE1:Hg19::chr17:76870126..76870201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002jwe.2_5end | |association_with_transcript=0bp_to_uc002jwe.2_5end | ||
|cluster_id=chr17:76870126..76870201,- | |||
|coexpression_cluster_id=C327 | |coexpression_cluster_id=C327 | ||
|description=CAGE_peak_10_at_TIMP2_5end | |description=CAGE_peak_10_at_TIMP2_5end | ||
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|ontology_enrichment_celltype=CL:0000148!3.79e-15!10;CL:0000541!3.79e-15!10;CL:0000147!1.70e-12!14;CL:0002567!1.55e-07!3 | |ontology_enrichment_celltype=CL:0000148!3.79e-15!10;CL:0000541!3.79e-15!10;CL:0000147!1.70e-12!14;CL:0002567!1.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.48e-17;10!CL:0002567;2.88e-12;3!CL:0000147;4.45e-12;14!CL:0000710;3.85e-08;20 | |ontology_enrichment_celltype_v019=CL:0000148;2.48e-17;10!CL:0002567;2.88e-12;3!CL:0000147;4.45e-12;14!CL:0000710;3.85e-08;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.51e-17,10;CL:0000541,2.51e-17,10;CL:0002567,2.73e-12,3;CL:0000147,4.49e-12,14;CL:0000710,3.88e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.93e-18;82!UBERON:0006241;1.98e-12;3!UBERON:0003057;1.98e-12;3!UBERON:0010122;3.74e-08;2 | |ontology_enrichment_development_v019=UBERON:0006601;3.93e-18;82!UBERON:0006241;1.98e-12;3!UBERON:0003057;1.98e-12;3!UBERON:0010122;3.74e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.31e-08;2 | |ontology_enrichment_disease_v019=DOID:1909;1.31e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.20e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.59e-52!57;UBERON:0005068!1.59e-52!57;UBERON:0006241!1.59e-52!57;UBERON:0007135!1.59e-52!57;UBERON:0007023!4.73e-52!115;UBERON:0005743!1.22e-48!86;UBERON:0001017!2.31e-47!82;UBERON:0000955!4.84e-46!69;UBERON:0006238!4.84e-46!69;UBERON:0000073!8.56e-45!94;UBERON:0001016!8.56e-45!94;UBERON:0003075!3.42e-43!86;UBERON:0007284!3.42e-43!86;UBERON:0002616!5.24e-42!59;UBERON:0002346!1.30e-40!90;UBERON:0002780!4.86e-39!41;UBERON:0001890!4.86e-39!41;UBERON:0006240!4.86e-39!41;UBERON:0001893!1.55e-38!34;UBERON:0002020!1.75e-38!34;UBERON:0003528!1.75e-38!34;UBERON:0003080!6.81e-38!42;UBERON:0002791!8.53e-37!33;UBERON:0001869!9.10e-35!32;UBERON:0003056!1.46e-28!61;UBERON:0000153!9.77e-26!129;UBERON:0007811!9.77e-26!129;UBERON:0000033!4.01e-25!123;UBERON:0002619!5.42e-24!22;UBERON:0004121!1.03e-23!169;UBERON:0000956!7.04e-23!25;UBERON:0000203!7.04e-23!25;UBERON:0000924!8.57e-23!173;UBERON:0006601!8.57e-23!173;UBERON:0001950!8.15e-21!20;UBERON:0002308!2.82e-18!9;UBERON:0000125!2.82e-18!9;UBERON:0002420!8.06e-18!9;UBERON:0007245!8.06e-18!9;UBERON:0010009!8.06e-18!9;UBERON:0010011!8.06e-18!9;UBERON:0000454!8.06e-18!9;UBERON:0003076!2.84e-15!15;UBERON:0003057!2.84e-15!15;UBERON:0009663!1.58e-14!7;UBERON:0000025!2.86e-14!194;UBERON:0002298!7.52e-13!8;UBERON:0004732!8.51e-12!13;UBERON:0000200!9.61e-12!6;UBERON:0000064!6.33e-11!219;UBERON:0000349!3.49e-10!5;UBERON:0004733!4.35e-10!12;UBERON:0002028!4.35e-10!12;UBERON:0007277!4.35e-10!12;UBERON:0000483!3.43e-09!309;UBERON:0000119!5.90e-09!312;UBERON:0004111!7.59e-09!241;UBERON:0000369!8.42e-09!4;UBERON:0002435!8.42e-09!4;UBERON:0000204!8.42e-09!4;UBERON:0010082!8.42e-09!4;UBERON:0001871!1.50e-08!7;UBERON:0000475!1.52e-08!365;UBERON:0002240!1.34e-07!3;UBERON:0000062!1.98e-07!511;UBERON:0000988!2.03e-07!3;UBERON:0006331!2.35e-07!3;UBERON:0001896!3.33e-07!3;UBERON:0005290!3.33e-07!3;UBERON:0010096!3.33e-07!3;UBERON:0005383!6.32e-07!3;UBERON:0005382!6.32e-07!3;UBERON:0001872!8.62e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.59e-52!57;UBERON:0005068!1.59e-52!57;UBERON:0006241!1.59e-52!57;UBERON:0007135!1.59e-52!57;UBERON:0007023!4.73e-52!115;UBERON:0005743!1.22e-48!86;UBERON:0001017!2.31e-47!82;UBERON:0000955!4.84e-46!69;UBERON:0006238!4.84e-46!69;UBERON:0000073!8.56e-45!94;UBERON:0001016!8.56e-45!94;UBERON:0003075!3.42e-43!86;UBERON:0007284!3.42e-43!86;UBERON:0002616!5.24e-42!59;UBERON:0002346!1.30e-40!90;UBERON:0002780!4.86e-39!41;UBERON:0001890!4.86e-39!41;UBERON:0006240!4.86e-39!41;UBERON:0001893!1.55e-38!34;UBERON:0002020!1.75e-38!34;UBERON:0003528!1.75e-38!34;UBERON:0003080!6.81e-38!42;UBERON:0002791!8.53e-37!33;UBERON:0001869!9.10e-35!32;UBERON:0003056!1.46e-28!61;UBERON:0000153!9.77e-26!129;UBERON:0007811!9.77e-26!129;UBERON:0000033!4.01e-25!123;UBERON:0002619!5.42e-24!22;UBERON:0004121!1.03e-23!169;UBERON:0000956!7.04e-23!25;UBERON:0000203!7.04e-23!25;UBERON:0000924!8.57e-23!173;UBERON:0006601!8.57e-23!173;UBERON:0001950!8.15e-21!20;UBERON:0002308!2.82e-18!9;UBERON:0000125!2.82e-18!9;UBERON:0002420!8.06e-18!9;UBERON:0007245!8.06e-18!9;UBERON:0010009!8.06e-18!9;UBERON:0010011!8.06e-18!9;UBERON:0000454!8.06e-18!9;UBERON:0003076!2.84e-15!15;UBERON:0003057!2.84e-15!15;UBERON:0009663!1.58e-14!7;UBERON:0000025!2.86e-14!194;UBERON:0002298!7.52e-13!8;UBERON:0004732!8.51e-12!13;UBERON:0000200!9.61e-12!6;UBERON:0000064!6.33e-11!219;UBERON:0000349!3.49e-10!5;UBERON:0004733!4.35e-10!12;UBERON:0002028!4.35e-10!12;UBERON:0007277!4.35e-10!12;UBERON:0000483!3.43e-09!309;UBERON:0000119!5.90e-09!312;UBERON:0004111!7.59e-09!241;UBERON:0000369!8.42e-09!4;UBERON:0002435!8.42e-09!4;UBERON:0000204!8.42e-09!4;UBERON:0010082!8.42e-09!4;UBERON:0001871!1.50e-08!7;UBERON:0000475!1.52e-08!365;UBERON:0002240!1.34e-07!3;UBERON:0000062!1.98e-07!511;UBERON:0000988!2.03e-07!3;UBERON:0006331!2.35e-07!3;UBERON:0001896!3.33e-07!3;UBERON:0005290!3.33e-07!3;UBERON:0010096!3.33e-07!3;UBERON:0005383!6.32e-07!3;UBERON:0005382!6.32e-07!3;UBERON:0001872!8.62e-07!5 | ||
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|short_description=p10@TIMP2 | |short_description=p10@TIMP2 | ||
}} | }} |
Latest revision as of 23:25, 17 September 2015
Short description: | p10@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TIMP2_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 0bp_to_uc002jwe.2_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.51e-17 | 10 |
melanoblast | 2.51e-17 | 10 |
light melanocyte | 2.73e-12 | 3 |
pigment cell | 4.49e-12 | 14 |
neurecto-epithelial cell | 3.88e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.20e-08 | 2 |