FFCP PHASE1:Hg19::chr12:28122899..28122916,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |||
|TSSclassifier=strong | |||
|UniProt=P12272,Q53XY9 | |||
|association_with_transcript=-5bp_to_NM_198964,NM_198966,uc001rik.2,uc001rim.2_5end | |||
|cluster_id=chr12:28122899..28122916,- | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_2_at_PTHLH_5end | |||
|id=chr12:28122899..28122916,- | |||
|ontology_enrichment_celltype=CL:0002076!1.42e-13!43;CL:0002368!2.63e-09!13;CL:0000223!1.73e-08!59;CL:0000066!1.77e-08!254;CL:0002159!8.40e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.23e-14;42!CL:0002368;2.72e-13;13!CL:0002159;2.08e-10;14!CL:0002202;5.95e-08;9!CL:0002632;5.95e-08;9!CL:0000244;2.01e-07;4!CL:0000731;2.01e-07;4!CL:0002251;3.13e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.63e-18,42;CL:0002368,2.82e-13,13;CL:0000066,1.86e-12,253;CL:0000223,7.95e-12,58;CL:0002159,2.06e-10,14;CL:0002202,6.13e-08,9;CL:0002632,6.13e-08,9;CL:0000244,1.99e-07,4;CL:0000731,1.99e-07,4;CL:0002251,2.87e-07,20;CL:0000076,9.98e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;5.55e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!1.94e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.18e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.50e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.10e-09!95;UBERON:0000161!3.90e-09!35;UBERON:0004119!5.40e-09!169;UBERON:0000925!5.40e-09!169;UBERON:0006595!5.40e-09!169;UBERON:0001004!2.49e-07!72;UBERON:0005157!3.17e-07!51;UBERON:0000478!3.20e-07!24;UBERON:0005153!5.51e-07!37;UBERON:0000467!8.81e-07!625;UBERON:0000468!9.00e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;7.49e-12;12!UBERON:0003729;1.13e-08;13!UBERON:0000365;1.14e-08;5!UBERON:0000478;2.24e-08;24!UBERON:0000344;3.16e-07;20!UBERON:0005910;4.38e-07;6!UBERON:0007196;6.09e-07;15!UBERON:0001558;6.09e-07;15!UBERON:0001708;7.60e-07;4!UBERON:0008895;7.60e-07;4!UBERON:0005911;8.36e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.66e-11,160;UBERON:0000925,1.66e-11,160;UBERON:0006595,1.66e-11,160;UBERON:0000161,1.77e-10,36;UBERON:0001004,2.18e-10,74;UBERON:0005157,1.42e-09,47;UBERON:0003102,2.01e-09,99;UBERON:0003729,1.12e-08,13;UBERON:0000365,1.15e-08,5;UBERON:0000478,2.08e-08,24;UBERON:0005153,8.87e-08,37;UBERON:0000033,1.24e-07,56;UBERON:0000153,1.26e-07,62;UBERON:0007811,1.26e-07,62;UBERON:0000344,2.93e-07,20;UBERON:0005910,4.39e-07,6;UBERON:0003100,5.72e-07,41;UBERON:0007196,6.20e-07,15;UBERON:0001558,6.20e-07,15;UBERON:0005911,8.81e-07,82;UBERON:0001708,9.01e-07,4;UBERON:0008895,9.01e-07,4;UBERON:0000166,9.67e-07,22 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0.737201809504527,0,0.655324116390517,0.791300934685361,0.123766352960047,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.61560529038394,0,0,0,0.958120975510189,0,0,0,0,0,0,0.154816123316076,68.9565918359195,69.5785672377758,24.403764671008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,3.9764297352555,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,0.196468613246569,46.2655016131529,26.6964798804789,0,0,0,0,0,0,0.198762407366705,0,0,1.69592382577203,4.61449379830897,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,73.2638007599458,0,0,0,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,2.4666754841716,0.311211035399766,0,0,0,0,0,0,1.1409436430889,0.448346041655403,0,0,0,0,0.122834317311768,0,16.6320400019487,11.8688126053707,0,0,0.168336113954066,0.250237039743928,0,0,0,31.8504684881985,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.201504196455281,0.169560592310488,199.445200464522,449.212860613105,402.96045652155,0,0,0,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,325.629096807392,10.1161577931858,76.804134922486,58.9788395659833,0.325808305310325,0,0,2.43453850447661,0,0.144366447761074,0,0,0,0,0,0,0,513.661410247538,454.895603162512,303.256933001465,15.1353903367814,17.1474023723238,20.7026646749214,0.492663237895943,0,0,0,0,0.507983154337352,0,0,1.71072446022705,0,0,0,0,0,0,4.26596662000667,0,0,0.797814349754612,0,0,0,0,3.71742783511184,0.542621605391443,0,0,2.13235169245527,0,0.602878754119172,2.61460037580088,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0.368738337083406,0,0,0,0,0,0,15.156378572313,0,3.62868351995616,0.248107807818777,0.306923946576125,0,0,0,0,0,0.308419387605311,1.24293207719189,3.12083192852475,2.07701771673448,0.697262270759755,0.120859449591622,313.792626024641,5.80110230296147,3.4444334449382,1.82091168006717,3.14698595902618,0,0.0770153371044148,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,232.57754288845,108.560061088099,0,0.096670718292122,0.462145851343933,0,0,0,0,0,0.178064071293475,169.747608075725,110.124908600206,101.707331858184,28.2230208586984,0,0.31481234683064,2.0911118104818,1.23213432070436,1.06461206063404,0,0,3.00562262158182,0,0,0,0,0,2.22742273548156,0,0.179872457583315,0,0,1.01091240786658,3.17020642346017,0.842516912477962,0,68.2397770967596,3.16950440270266,0.272999822815972,3.53513579884282,7.910568163417,16.5409603063837,0.66343897524122,2.63070531152258,0,0,0,1.54911749049875,0.563391205064483,0,0,0.35667105148125,0,0.844430541190656,2.96365403663912,0.379473173765715,1.39973888097993,97.0881117400417,86.4689935441166,76.2236894029258,0.376575203107117,156.273450279656,92.6593116171941,95.780913163922,159.198316343423,0,0,0,0,0,0,0,0,0,0,33.8155498053824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,49.4201083407018,5.64232893582013,9.21482106297696,0.994147647766298,0,0.779160935160341,0,0,0.597743964753209,0,0,16.3629892003448,0.123084805461069,0,2.3365771298305,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,0,2.17499872630438,54.6208551770398,2.2882828526349,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,2.50962739701486,0.307801034015188,0.91153644677601,0,0,0,8.61303131276183,13.1900534498682,7.46248686426089,0,0,0,0,0.19606253431774,0.167821586975843,0,0.158936578980379,0,0,0,0,0.995261931078505,0.0884575645033392,0,24.9077748091722,27.0605026292841,25.7922215278475,0.067401132980677,0.802577647298789,0.468528891450678,0,2.73930466504926,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,14.1109052276704,10.0988679633267,0.17472666824203,0,0,0,0,0.775912131907355,0,1.35588444468319,0,0.19871461170299,0.0633107959558787,0,15.8714464098037,2.13452994739353,74.5289843741346,0.432271251462318,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,3.90995361781156,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0.121499113316049,1.34173875039706,0,0,3.59041144165982,0,1.15149118391667,0,0.662091970365432,0,0,0,0.326587360109409,0,9.44063988617398,0.681552087141687,0.113312091520126,0,0,0,0,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,8.93677760878255,0,0.2506898940227,0,0,39.4205781588088,0,0,0,0,0,0.0620964029413835,0,23.8712579207624,0,0,0.235265819698172,0,0,0.447764408660622,0,0,0.189403005275089,0.503135803505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| |||
|short_description=p2@PTHLH | |||
}} |
Latest revision as of 00:44, 18 September 2015
Short description: | p2@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTHLH_5end |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | -5bp_to_NM_198964, NM_198966, uc001rik.2, uc001rim.2_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | P12272Q53XY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.63e-18 | 42 |
respiratory epithelial cell | 2.82e-13 | 13 |
epithelial cell | 1.86e-12 | 253 |
endodermal cell | 7.95e-12 | 58 |
general ecto-epithelial cell | 2.06e-10 | 14 |
epithelial cell of tracheobronchial tree | 6.13e-08 | 9 |
epithelial cell of lower respiratory tract | 6.13e-08 | 9 |
transitional epithelial cell | 1.99e-07 | 4 |
urothelial cell | 1.99e-07 | 4 |
epithelial cell of alimentary canal | 2.87e-07 | 20 |
squamous epithelial cell | 9.98e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.66e-11 | 160 |
endoderm | 1.66e-11 | 160 |
presumptive endoderm | 1.66e-11 | 160 |
orifice | 1.77e-10 | 36 |
respiratory system | 2.18e-10 | 74 |
epithelial fold | 1.42e-09 | 47 |
surface structure | 2.01e-09 | 99 |
mouth mucosa | 1.12e-08 | 13 |
urothelium | 1.15e-08 | 5 |
extraembryonic structure | 2.08e-08 | 24 |
epithelial bud | 8.87e-08 | 37 |
head | 1.24e-07 | 56 |
anterior region of body | 1.26e-07 | 62 |
craniocervical region | 1.26e-07 | 62 |
mucosa | 2.93e-07 | 20 |
transitional epithelium | 4.39e-07 | 6 |
female organism | 5.72e-07 | 41 |
tracheobronchial tree | 6.20e-07 | 15 |
lower respiratory tract | 6.20e-07 | 15 |
endo-epithelium | 8.81e-07 | 82 |
jaw skeleton | 9.01e-07 | 4 |
splanchnocranium | 9.01e-07 | 4 |
oral opening | 9.67e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.50e-11 | 14 |