FFCP PHASE1:Hg19::chr12:28123016..28123029,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:28123016..28123029,-
|short_description=p4@PTHLH
|description=CAGE_peak_4_at_PTHLH_5end
|association_with_transcript=-36bp_to_ENST00000395868_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5744 | |EntrezGene=5744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |HGNC=9607 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000395868_5end | |||
|cluster_id=chr12:28123016..28123029,- | |||
|coexpression_cluster_id=C1359 | |||
|description=CAGE_peak_4_at_PTHLH_5end | |||
|id=chr12:28123016..28123029,- | |||
|ontology_enrichment_celltype=CL:0002076!6.86e-14!43;CL:0000066!1.05e-13!254;CL:0000223!1.70e-10!59;CL:0002368!1.58e-09!13;CL:0000076!2.00e-08!62;CL:0000220!1.00e-07!246;CL:0002321!1.83e-07!248;CL:0002159!3.20e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.52e-18;42!CL:0002368;3.13e-15;13!CL:0002159;8.57e-15;14!CL:0002251;1.74e-09;20!CL:0000244;2.08e-09;4!CL:0000731;2.08e-09;4!CL:0000349;8.11e-09;19!CL:0002202;3.13e-08;9!CL:0002632;3.13e-08;9!CL:0002166;3.88e-08;3!CL:0002621;4.11e-08;3!CL:0002537;2.98e-07;5!CL:0000307;3.10e-07;3!CL:0002328;3.34e-07;3!CL:0002077;7.00e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.62e-24,42;CL:0000066,5.54e-21,253;CL:0000223,3.29e-18,58;CL:0002368,3.34e-15,13;CL:0002159,8.34e-15,14;CL:0002251,1.70e-09,20;CL:0000244,1.98e-09,4;CL:0000731,1.98e-09,4;CL:0000349,8.52e-09,19;CL:0002202,3.11e-08,9;CL:0002632,3.11e-08,9;CL:0002166,3.89e-08,3;CL:0002621,4.07e-08,3;CL:0002077,4.64e-08,34;CL:0000076,1.39e-07,63;CL:0000068,3.14e-07,3;CL:0000069,3.14e-07,3;CL:0000307,3.14e-07,3;CL:0000377,3.14e-07,3;CL:0002328,3.28e-07,3;CL:0002537,3.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;2.51e-10;58!CL:0000377;3.10e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.04e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.98e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.05e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.81e-10!14;UBERON:0000158!1.81e-10!14;UBERON:0004119!2.75e-10!169;UBERON:0000925!2.75e-10!169;UBERON:0006595!2.75e-10!169;UBERON:0003100!1.03e-08!41;UBERON:0000161!1.17e-08!35;UBERON:0005156!1.47e-08!59;UBERON:0000990!1.47e-08!59;UBERON:0000467!1.95e-08!625;UBERON:0000480!2.49e-08!626;UBERON:0000478!7.35e-08!24;UBERON:0005153!1.01e-07!37;UBERON:0001004!1.26e-07!72;UBERON:0003134!2.25e-07!37;UBERON:0000474!2.25e-07!37;UBERON:0000468!3.50e-07!659;UBERON:0000923!5.47e-07!604;UBERON:0005291!5.47e-07!604;UBERON:0006598!5.47e-07!604;UBERON:0002532!5.47e-07!604;UBERON:0005157!5.95e-07!51;UBERON:0002050!6.82e-07!605;UBERON:0005423!6.82e-07!605;UBERON:0000922!9.63e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;1.05e-12;13!UBERON:0000344;2.85e-11;20!UBERON:0000486;4.39e-11;12!UBERON:0000365;4.41e-11;5!UBERON:0005631;1.82e-09;10!UBERON:0000158;1.82e-09;10!UBERON:0005910;3.76e-09;6!UBERON:0000165;1.51e-08;28!UBERON:0001949;4.11e-08;3!UBERON:0000478;6.80e-08;24!UBERON:0005911;3.27e-07;36!UBERON:0004815;3.34e-07;3!UBERON:0002031;3.34e-07;3!UBERON:0001828;5.57e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.13e-13,160;UBERON:0000925,2.13e-13,160;UBERON:0006595,2.13e-13,160;UBERON:0003729,8.66e-13,13;UBERON:0005631,1.04e-12,14;UBERON:0000158,1.04e-12,14;UBERON:0001004,2.11e-11,74;UBERON:0000344,2.34e-11,20;UBERON:0000365,4.02e-11,5;UBERON:0003124,1.18e-09,7;UBERON:0005910,3.49e-09,6;UBERON:0003102,9.57e-09,99;UBERON:0004923,1.02e-08,66;UBERON:0000161,1.96e-08,36;UBERON:0000033,3.36e-08,56;UBERON:0000165,3.73e-08,29;UBERON:0000930,3.73e-08,29;UBERON:0001949,4.07e-08,3;UBERON:0000166,6.43e-08,22;UBERON:0000478,6.54e-08,24;UBERON:0003100,3.17e-07,41;UBERON:0004815,3.28e-07,3;UBERON:0002031,3.28e-07,3;UBERON:0001828,4.79e-07,8;UBERON:0000153,5.61e-07,62;UBERON:0007811,5.61e-07,62;UBERON:0001007,7.40e-07,145;UBERON:0001555,7.40e-07,145;UBERON:0007026,7.40e-07,145 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.958120975510189,0,0,0,0,0,0,0,8.27479102031034,6.024118375565,3.69754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0,4.37154345951051,5.56176664176644,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,7.41359888642308,0,0,0,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,8.31602000097437,1.97813543422845,0,0,0,0,0,0,0,6.00952235626387,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,17.3934767846967,16.9102594766317,17.4950803187292,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,11.8530308241316,6.74410519545717,12.5661215514539,7.22189872236531,0,0,0,0.34779121492523,0,0,0,0,0,0.858486162094873,0,0,0,38.4308719345786,18.4780341018745,11.6255579738757,7.16468181622786,4.94077695473735,4.98397482914775,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,2.42502057157008,1.66435439510497,3.32629322662648,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.348631135379878,0,17.4440629163858,3.22283461275637,0.229628896329213,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0,10.3367796839311,9.1008434445113,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,13.2227932288782,15.7595855239387,5.74257206225629,4.046311234222,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0.95460974377781,0,0,0,0,0.202182481573316,1.58510321173008,0,0,4.14312932373184,1.05650146756755,0.136499911407986,0.282810863907425,0,1.65409603063837,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,6.63932577806033,7.37332503089366,4.3556393944529,0,7.74909670808214,5.05414427002877,8.42517291719684,8.4997658076575,0,0,0,0,0,0,0,0,0,0,20.3383379264256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.694360229572,3.26661148915902,16.8938386154578,0,0.140669416410513,0.333926115068718,0,0,0.597743964753209,0.276283915531148,0,11.249555075237,0,0,1.61763032065188,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,2.27586896570999,0.762760950878299,0,0,0,0,0,0,0,0,0,0.219385397153973,0,2.50962739701486,0.307801034015188,0.797594390929008,0,0,0,4.78501739597879,2.38153742844842,2.13213910407454,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,1.77912677208373,0.741383633679017,0.730953646538188,0.202203398942031,0,1.1713222286267,0,2.54364004611717,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0.661983911750998,0.627865836814451,2.38944859545918,0,0.138674673013139,0,2.44980993535944,0.870592065804026,0.52418000472609,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.316553979779393,0,7.05397618213497,1.70762395791482,22.1788666636165,0.432271251462318,0,0,1.00838358591705,0,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0.0824158583811665,0,1.67326718575073,0,0.795229689809303,0,0,0,0,0,0,0.242998226632099,1.0063040627978,0,0,0.211200673038813,0.179287339332845,2.68681276247223,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,3.11951578847488,0.170388021785422,0.339936274560377,0,0,0,0,0.684347351537318,0,0,0.157204305099666,0.414239055347196,0,0,0,5.74507131993164,0,0,0,0,20.2599784162802,0,0,0,1.72022758707021,0.332787154610557,0.18628920882415,0,7.6238048856885,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0.621748802331122,0.147855149989634,0.318593534327405,0,0.465788870628778,2.48823724704513,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,1.18151612746737,0,0.796191777397232,0,0.343395705182793,0.336749488765919,1.26184898228651,0.192619830407303,0,0.260994291965212,2.04035332961045,0.463044948647668,0,0.179088841081487,0,0,0.176689145945881,0,0.506827321959218,0,0,0.303859956177382,0,0.194860308839388,0,0,1.31043939538565,0.245772908753719,5.91673945404156,0,0,0,0,0.552317850755522,4.33626473930278,3.11038630016486,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,1.601141496570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| ||
|short_description=p4@PTHLH | |||
}} | }} |
Latest revision as of 00:45, 18 September 2015
Short description: | p4@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTHLH_5end |
Coexpression cluster: | C1359_acantholytic_Mallassezderived_maxillary_renal_gastric_amniotic_Prostate |
Association with transcript: | -36bp_to_ENST00000395868_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.62e-24 | 42 |
epithelial cell | 5.54e-21 | 253 |
endodermal cell | 3.29e-18 | 58 |
respiratory epithelial cell | 3.34e-15 | 13 |
general ecto-epithelial cell | 8.34e-15 | 14 |
epithelial cell of alimentary canal | 1.70e-09 | 20 |
transitional epithelial cell | 1.98e-09 | 4 |
urothelial cell | 1.98e-09 | 4 |
extraembryonic cell | 8.52e-09 | 19 |
epithelial cell of tracheobronchial tree | 3.11e-08 | 9 |
epithelial cell of lower respiratory tract | 3.11e-08 | 9 |
epithelial cell of Malassez | 3.89e-08 | 3 |
gingival epithelial cell | 4.07e-08 | 3 |
ecto-epithelial cell | 4.64e-08 | 34 |
squamous epithelial cell | 1.39e-07 | 63 |
duct epithelial cell | 3.14e-07 | 3 |
branched duct epithelial cell | 3.14e-07 | 3 |
tracheal epithelial cell | 3.14e-07 | 3 |
tracheoblast | 3.14e-07 | 3 |
bronchial epithelial cell | 3.28e-07 | 3 |
amnion mesenchymal stem cell | 3.49e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.13e-13 | 160 |
endoderm | 2.13e-13 | 160 |
presumptive endoderm | 2.13e-13 | 160 |
mouth mucosa | 8.66e-13 | 13 |
extraembryonic membrane | 1.04e-12 | 14 |
membranous layer | 1.04e-12 | 14 |
respiratory system | 2.11e-11 | 74 |
mucosa | 2.34e-11 | 20 |
urothelium | 4.02e-11 | 5 |
chorion | 1.18e-09 | 7 |
transitional epithelium | 3.49e-09 | 6 |
surface structure | 9.57e-09 | 99 |
organ component layer | 1.02e-08 | 66 |
orifice | 1.96e-08 | 36 |
head | 3.36e-08 | 56 |
mouth | 3.73e-08 | 29 |
stomodeum | 3.73e-08 | 29 |
gingival epithelium | 4.07e-08 | 3 |
oral opening | 6.43e-08 | 22 |
extraembryonic structure | 6.54e-08 | 24 |
female organism | 3.17e-07 | 41 |
lower respiratory tract epithelium | 3.28e-07 | 3 |
epithelium of bronchus | 3.28e-07 | 3 |
gingiva | 4.79e-07 | 8 |
anterior region of body | 5.61e-07 | 62 |
craniocervical region | 5.61e-07 | 62 |
digestive system | 7.40e-07 | 145 |
digestive tract | 7.40e-07 | 145 |
primitive gut | 7.40e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.05e-14 | 14 |