FFCP PHASE1:Hg19::chr4:6784401..6784510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9778 | |EntrezGene=9778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28992 | |HGNC=28992 | ||
|TSSclassifier=strong | |||
|UniProt=Q92628,A5YKK5 | |UniProt=Q92628,A5YKK5 | ||
|association_with_transcript=0bp_to_ENST00000307659,ENST00000425103,NM_001100590,NM_014743,uc003gjq.3,uc003gjr.3_5end | |association_with_transcript=0bp_to_ENST00000307659,ENST00000425103,NM_001100590,NM_014743,uc003gjq.3,uc003gjr.3_5end | ||
|cluster_id=chr4:6784401..6784510,+ | |||
|coexpression_cluster_id=C468 | |coexpression_cluster_id=C468 | ||
|description=CAGE_peak_1_at_KIAA0232_5end | |description=CAGE_peak_1_at_KIAA0232_5end | ||
|id=chr4:6784401..6784510,+ | |id=chr4:6784401..6784510,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.40e-23!76;CL:0000839!4.75e-21!70;CL:0000557!5.55e-21!71;CL:0002057!2.63e-20!42;CL:0002009!9.98e-19!65;CL:0002194!7.62e-18!63;CL:0000576!7.62e-18!63;CL:0000040!7.62e-18!63;CL:0000559!7.62e-18!63;CL:0000860!1.15e-17!45;CL:0000763!3.03e-17!112;CL:0000049!3.03e-17!112;CL:0000738!6.77e-14!140;CL:0002031!3.34e-12!124;CL:0000037!3.61e-11!172;CL:0000566!3.61e-11!172;CL:0002032!6.53e-11!165;CL:0000837!6.53e-11!165;CL:0002087!1.38e-09!119;CL:0000988!3.70e-09!182 | |ontology_enrichment_celltype=CL:0000766!1.40e-23!76;CL:0000839!4.75e-21!70;CL:0000557!5.55e-21!71;CL:0002057!2.63e-20!42;CL:0002009!9.98e-19!65;CL:0002194!7.62e-18!63;CL:0000576!7.62e-18!63;CL:0000040!7.62e-18!63;CL:0000559!7.62e-18!63;CL:0000860!1.15e-17!45;CL:0000763!3.03e-17!112;CL:0000049!3.03e-17!112;CL:0000738!6.77e-14!140;CL:0002031!3.34e-12!124;CL:0000037!3.61e-11!172;CL:0000566!3.61e-11!172;CL:0002032!6.53e-11!165;CL:0000837!6.53e-11!165;CL:0002087!1.38e-09!119;CL:0000988!3.70e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-16;33!CL:0002057;1.19e-16;33!CL:0000473;8.52e-14;39!CL:0000234;8.52e-14;39!CL:0000576;1.47e-13;48!CL:0000766;1.68e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.40e-26,72;CL:0000839,2.08e-23,66;CL:0000557,2.61e-23,67;CL:0002009,5.19e-21,61;CL:0000860,2.63e-20,42;CL:0002057,2.63e-20,42;CL:0002194,4.24e-20,59;CL:0000576,4.24e-20,59;CL:0000040,4.24e-20,59;CL:0000559,4.24e-20,59;CL:0000473,5.39e-20,48;CL:0000234,5.39e-20,48;CL:0000763,1.15e-18,108;CL:0000049,1.15e-18,108;CL:0000738,6.16e-15,136;CL:0002031,3.12e-13,120;CL:0000037,5.97e-12,168;CL:0002032,1.06e-11,161;CL:0000837,1.06e-11,161;CL:0002087,1.78e-10,115;CL:0000988,3.31e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.96e-15;42!UBERON:0006601;3.02e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.50e-39!115;UBERON:0001049!5.44e-22!57;UBERON:0005068!5.44e-22!57;UBERON:0006241!5.44e-22!57;UBERON:0007135!5.44e-22!57;UBERON:0002390!1.60e-20!102;UBERON:0003061!1.60e-20!102;UBERON:0001017!8.82e-20!82;UBERON:0002780!8.98e-20!41;UBERON:0001890!8.98e-20!41;UBERON:0006240!8.98e-20!41;UBERON:0003080!1.08e-19!42;UBERON:0005743!1.16e-18!86;UBERON:0000955!6.35e-18!69;UBERON:0006238!6.35e-18!69;UBERON:0002616!1.25e-17!59;UBERON:0000073!1.82e-17!94;UBERON:0001016!1.82e-17!94;UBERON:0001893!6.84e-17!34;UBERON:0002020!8.47e-17!34;UBERON:0003528!8.47e-17!34;UBERON:0002193!1.55e-16!112;UBERON:0002371!2.57e-16!80;UBERON:0002791!2.73e-16!33;UBERON:0001474!3.68e-16!86;UBERON:0001869!8.18e-16!32;UBERON:0004765!7.60e-13!101;UBERON:0001434!7.60e-13!101;UBERON:0002619!3.61e-12!22;UBERON:0003075!4.72e-12!86;UBERON:0007284!4.72e-12!86;UBERON:0000956!4.82e-12!25;UBERON:0000203!4.82e-12!25;UBERON:0001950!3.67e-11!20;UBERON:0002346!4.05e-11!90;UBERON:0002405!1.86e-10!115;UBERON:0003056!1.14e-09!61;UBERON:0000062!3.31e-09!511;UBERON:0000153!1.12e-07!129;UBERON:0007811!1.12e-07!129;UBERON:0000033!3.97e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!5.50e-39!115;UBERON:0001049!5.44e-22!57;UBERON:0005068!5.44e-22!57;UBERON:0006241!5.44e-22!57;UBERON:0007135!5.44e-22!57;UBERON:0002390!1.60e-20!102;UBERON:0003061!1.60e-20!102;UBERON:0001017!8.82e-20!82;UBERON:0002780!8.98e-20!41;UBERON:0001890!8.98e-20!41;UBERON:0006240!8.98e-20!41;UBERON:0003080!1.08e-19!42;UBERON:0005743!1.16e-18!86;UBERON:0000955!6.35e-18!69;UBERON:0006238!6.35e-18!69;UBERON:0002616!1.25e-17!59;UBERON:0000073!1.82e-17!94;UBERON:0001016!1.82e-17!94;UBERON:0001893!6.84e-17!34;UBERON:0002020!8.47e-17!34;UBERON:0003528!8.47e-17!34;UBERON:0002193!1.55e-16!112;UBERON:0002371!2.57e-16!80;UBERON:0002791!2.73e-16!33;UBERON:0001474!3.68e-16!86;UBERON:0001869!8.18e-16!32;UBERON:0004765!7.60e-13!101;UBERON:0001434!7.60e-13!101;UBERON:0002619!3.61e-12!22;UBERON:0003075!4.72e-12!86;UBERON:0007284!4.72e-12!86;UBERON:0000956!4.82e-12!25;UBERON:0000203!4.82e-12!25;UBERON:0001950!3.67e-11!20;UBERON:0002346!4.05e-11!90;UBERON:0002405!1.86e-10!115;UBERON:0003056!1.14e-09!61;UBERON:0000062!3.31e-09!511;UBERON:0000153!1.12e-07!129;UBERON:0007811!1.12e-07!129;UBERON:0000033!3.97e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.41e-14;34!UBERON:0003528;1.56e-14;34!UBERON:0002020;1.56e-14;34!UBERON:0001869;1.85e-14;32!UBERON:0002780;1.95e-14;41!UBERON:0001890;1.95e-14;41!UBERON:0002791;1.96e-14;32!UBERON:0000073;1.82e-12;53!UBERON:0002616;1.82e-12;53!UBERON:0002619;3.76e-12;22!UBERON:0000956;4.26e-12;25!UBERON:0000203;4.26e-12;25!UBERON:0001950;3.86e-11;20!UBERON:0007023;1.39e-10;114!UBERON:0001017;1.35e-08;75!UBERON:0000955;1.53e-08;68!UBERON:0001016;3.28e-08;83 | |||
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| ||
|short_description=p1@KIAA0232 | |short_description=p1@KIAA0232 | ||
}} | }} |
Latest revision as of 06:51, 18 September 2015
Short description: | p1@KIAA0232 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA0232_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000307659, ENST00000425103, NM_001100590, NM_014743, uc003gjq.3, uc003gjr.3_5end |
EntrezGene: | KIAA0232 |
HGNC: | 28992 |
UniProt: | Q92628A5YKK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.40e-26 | 72 |
myeloid lineage restricted progenitor cell | 2.08e-23 | 66 |
granulocyte monocyte progenitor cell | 2.61e-23 | 67 |
macrophage dendritic cell progenitor | 5.19e-21 | 61 |
classical monocyte | 2.63e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-20 | 42 |
monopoietic cell | 4.24e-20 | 59 |
monocyte | 4.24e-20 | 59 |
monoblast | 4.24e-20 | 59 |
promonocyte | 4.24e-20 | 59 |
defensive cell | 5.39e-20 | 48 |
phagocyte | 5.39e-20 | 48 |
myeloid cell | 1.15e-18 | 108 |
common myeloid progenitor | 1.15e-18 | 108 |
leukocyte | 6.16e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.12e-13 | 120 |
hematopoietic stem cell | 5.97e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-11 | 161 |
nongranular leukocyte | 1.78e-10 | 115 |
hematopoietic cell | 3.31e-10 | 177 |