FFCP PHASE1:Hg19::chr16:86601088..86601105,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2303 | |EntrezGene=2303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3801 | |HGNC=3801 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=147bp_to_BC111589_5end | |association_with_transcript=147bp_to_BC111589_5end | ||
|cluster_id=chr16:86601088..86601105,+ | |||
|description=CAGE_peak_5_at_FOXC2_5end | |description=CAGE_peak_5_at_FOXC2_5end | ||
|id=chr16:86601088..86601105,+ | |id=chr16:86601088..86601105,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.26e-19!180;CL:0000057!5.64e-11!75;CL:0000183!7.36e-11!59;CL:0000359!9.19e-11!32;CL:0000222!3.03e-10!119;CL:0000680!1.01e-08!57;CL:0000056!1.01e-08!57;CL:0000355!1.01e-08!57;CL:1000449!1.70e-08!16;CL:0000187!4.88e-08!54;CL:0000192!1.04e-07!42;CL:0000514!1.04e-07!42;CL:0000393!1.71e-07!60;CL:0000211!1.71e-07!60;CL:1000497!4.88e-07!18;CL:0002518!4.88e-07!18;CL:1000612!4.98e-07!7;CL:1000746!4.98e-07!7;CL:0002371!5.02e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.26e-19!180;CL:0000057!5.64e-11!75;CL:0000183!7.36e-11!59;CL:0000359!9.19e-11!32;CL:0000222!3.03e-10!119;CL:0000680!1.01e-08!57;CL:0000056!1.01e-08!57;CL:0000355!1.01e-08!57;CL:1000449!1.70e-08!16;CL:0000187!4.88e-08!54;CL:0000192!1.04e-07!42;CL:0000514!1.04e-07!42;CL:0000393!1.71e-07!60;CL:0000211!1.71e-07!60;CL:1000497!4.88e-07!18;CL:0002518!4.88e-07!18;CL:1000612!4.98e-07!7;CL:1000746!4.98e-07!7;CL:0002371!5.02e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.52e-15;15!CL:1000497;1.86e-13;17!CL:0002518;1.86e-13;17!CL:1000507;8.42e-12;10!CL:1000494;8.42e-12;10!CL:0000669;1.03e-11;4!CL:0002681;7.83e-10;12!CL:0002584;7.83e-10;12!CL:1000746;1.47e-09;7!CL:1000612;1.47e-09;7!CL:0002595;2.40e-08;5!CL:0002575;6.01e-07;2!CL:0000115;7.46e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.27e-15,15;CL:1000497,1.59e-13,17;CL:0002518,1.59e-13,17;CL:1000507,6.31e-12,10;CL:1000494,6.31e-12,10;CL:0000669,1.46e-11,4;CL:0002681,9.56e-10,12;CL:0002584,9.56e-10,12;CL:1000746,2.11e-09,7;CL:1000612,2.11e-09,7;CL:0002595,1.26e-08,5;CL:0000115,1.03e-07,36;CL:0002575,5.80e-07,2;CL:0002078,8.96e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;1.52e-15;15!UBERON:0004819;1.52e-15;15!UBERON:0001285;1.52e-15;15!UBERON:0007684;1.52e-15;15!UBERON:0004211;8.42e-12;10!UBERON:0009773;8.42e-12;10!UBERON:0001231;8.42e-12;10!UBERON:0004810;8.42e-12;10!UBERON:0001225;7.83e-10;12!UBERON:0008987;7.83e-10;12!UBERON:0000074;1.47e-09;7!UBERON:0001229;1.47e-09;7!UBERON:0003914;2.49e-09;74!UBERON:0002113;6.55e-09;24!UBERON:0011143;6.55e-09;24!UBERON:0011135;1.32e-08;5!UBERON:0002216;1.32e-08;5!UBERON:0011134;1.32e-08;5!UBERON:0002209;1.32e-08;5!UBERON:0002213;1.32e-08;5!UBERON:0007844;1.32e-08;5!UBERON:0011138;1.32e-08;5!UBERON:0001130;1.32e-08;5!UBERON:0001066;1.32e-08;5!UBERON:0001468;1.32e-08;5!UBERON:0003834;2.40e-08;5!UBERON:0001533;2.40e-08;5!UBERON:0001637;9.39e-08;42!UBERON:0003509;9.39e-08;42!UBERON:0004572;9.39e-08;42!UBERON:0002049;1.03e-07;75!UBERON:0007798;1.03e-07;75!UBERON:0001851;1.21e-07;15!UBERON:0000353;1.21e-07;15!UBERON:0000489;5.04e-07;29 | |||
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| ||
|short_description=p5@FOXC2 | |short_description=p5@FOXC2 | ||
}} | }} |
Latest revision as of 06:53, 18 September 2015
Short description: | p5@FOXC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_BC111589_5end |
EntrezGene: | FOXC2 |
HGNC: | 3801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.27e-15 | 15 |
kidney cell | 1.59e-13 | 17 |
kidney epithelial cell | 1.59e-13 | 17 |
kidney tubule cell | 6.31e-12 | 10 |
nephron tubule epithelial cell | 6.31e-12 | 10 |
pericyte cell | 1.46e-11 | 4 |
kidney cortical cell | 9.56e-10 | 12 |
renal cortical epithelial cell | 9.56e-10 | 12 |
glomerular cell | 2.11e-09 | 7 |
kidney corpuscule cell | 2.11e-09 | 7 |
smooth muscle cell of the subclavian artery | 1.26e-08 | 5 |
endothelial cell | 1.03e-07 | 36 |
central nervous system pericyte | 5.80e-07 | 2 |
meso-epithelial cell | 8.96e-07 | 45 |