FFCP PHASE1:Hg19::chr17:7991027..7991040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=242 | |EntrezGene=242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=430 | |HGNC=430 | ||
|TSSclassifier=strong | |||
|UniProt=O75342 | |UniProt=O75342 | ||
|association_with_transcript=-5bp_to_ENST00000319144_5end | |association_with_transcript=-5bp_to_ENST00000319144_5end | ||
|cluster_id=chr17:7991027..7991040,- | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_ALOX12B_5end | |description=CAGE_peak_1_at_ALOX12B_5end | ||
|id=chr17:7991027..7991040,- | |id=chr17:7991027..7991040,- | ||
|ontology_enrichment_celltype=CL:0002159!1.05e-13!13;CL:0002150!1.72e-12!3;CL:0000861!1.72e-12!3;CL:0000240!2.38e-10!6;CL:0000311!2.38e-10!6;CL:0000079!2.38e-10!6;CL:0000237!2.38e-10!6;CL:0000036!2.38e-10!6;CL:0000357!2.38e-10!6;CL:0000114!2.38e-10!6;CL:0001014!1.81e-09!2;CL:0001016!1.81e-09!2;CL:0000575!1.14e-08!2;CL:0002251!3.67e-08!21;CL:0000362!4.37e-08!8;CL:0000622!6.02e-08!5;CL:0000312!1.52e-07!5 | |ontology_enrichment_celltype=CL:0002159!1.05e-13!13;CL:0002150!1.72e-12!3;CL:0000861!1.72e-12!3;CL:0000240!2.38e-10!6;CL:0000311!2.38e-10!6;CL:0000079!2.38e-10!6;CL:0000237!2.38e-10!6;CL:0000036!2.38e-10!6;CL:0000357!2.38e-10!6;CL:0000114!2.38e-10!6;CL:0001014!1.81e-09!2;CL:0001016!1.81e-09!2;CL:0000575!1.14e-08!2;CL:0002251!3.67e-08!21;CL:0000362!4.37e-08!8;CL:0000622!6.02e-08!5;CL:0000312!1.52e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;6.68e-22;2!CL:0001016;6.68e-22;2!CL:0002252;1.25e-11;1!CL:0000622;2.22e-09;5!CL:0000453;2.47e-09;5!CL:0000154;5.84e-08;6!CL:0000840;6.38e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.86e-22,2;CL:0001016,4.86e-22,2;CL:0002252,1.19e-11,1;CL:0000622,1.92e-09,5;CL:0000453,2.17e-09,5;CL:0000154,5.17e-08,6;CL:0000840,5.74e-08,5;CL:0001029,5.74e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.76e-12;1!UBERON:0008814;8.93e-07;2!UBERON:0010056;8.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.78e-12;1!DOID:3149;4.78e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-12,1;DOID:3149,5.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.87e-11!21;UBERON:0001042!4.88e-10!10;UBERON:0009145!4.88e-10!10;UBERON:0000165!5.42e-10!28;UBERON:0000930!5.42e-10!28;UBERON:0003408!1.19e-09!10;UBERON:0003102!3.12e-09!95;UBERON:0006562!4.29e-09!11;UBERON:0001444!9.01e-08!48;UBERON:0000161!1.10e-07!35;UBERON:0000078!1.13e-07!18;UBERON:0001004!1.39e-07!72;UBERON:0001557!5.43e-07!19;UBERON:0001003!5.69e-07!14;UBERON:0007376!5.69e-07!14;UBERON:0007383!5.69e-07!14 | |ontology_enrichment_uberon=UBERON:0000166!3.87e-11!21;UBERON:0001042!4.88e-10!10;UBERON:0009145!4.88e-10!10;UBERON:0000165!5.42e-10!28;UBERON:0000930!5.42e-10!28;UBERON:0003408!1.19e-09!10;UBERON:0003102!3.12e-09!95;UBERON:0006562!4.29e-09!11;UBERON:0001444!9.01e-08!48;UBERON:0000161!1.10e-07!35;UBERON:0000078!1.13e-07!18;UBERON:0001004!1.39e-07!72;UBERON:0001557!5.43e-07!19;UBERON:0001003!5.69e-07!14;UBERON:0007376!5.69e-07!14;UBERON:0007383!5.69e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.70e-15;3!UBERON:0001033;2.70e-15;3!UBERON:0007029;2.93e-12;1!UBERON:0005795;4.78e-12;1!UBERON:0002372;6.61e-12;1!UBERON:0001961;6.61e-12;1!UBERON:0001744;6.61e-12;1!UBERON:0001042;6.61e-12;1!UBERON:0001735;6.61e-12;1!UBERON:0000989;7.76e-12;1!UBERON:0008811;7.76e-12;1!UBERON:0000014;9.37e-12;4!UBERON:0000165;2.17e-09;28!UBERON:0000002;4.12e-08;6!UBERON:0001560;4.12e-08;6!UBERON:0001003;7.65e-07;15!UBERON:0007376;7.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.80e-15,3;UBERON:0001033,2.80e-15,3;UBERON:0010056,2.80e-15,3;UBERON:0007029,2.93e-12,1;UBERON:0000166,6.03e-12,22;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0000989,7.76e-12,1;UBERON:0008811,7.76e-12,1;UBERON:0006258,7.76e-12,1;UBERON:0005876,7.76e-12,1;UBERON:0004874,7.76e-12,1;UBERON:0000014,1.02e-11,4;UBERON:0001042,3.41e-10,10;UBERON:0009145,3.41e-10,10;UBERON:0006562,2.59e-09,11;UBERON:0000165,4.91e-09,29;UBERON:0000930,4.91e-09,29;UBERON:0000002,3.90e-08,6;UBERON:0001560,3.90e-08,6;UBERON:0003102,1.86e-07,99;UBERON:0000161,3.00e-07,36;UBERON:0001003,7.50e-07,15;UBERON:0007376,7.50e-07,15;UBERON:0007383,7.50e-07,15 | |||
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| ||
|short_description=p1@ALOX12B | |short_description=p1@ALOX12B | ||
}} | }} |
Latest revision as of 09:46, 18 September 2015
Short description: | p1@ALOX12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALOX12B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -5bp_to_ENST00000319144_5end |
EntrezGene: | ALOX12B |
HGNC: | 430 |
UniProt: | O75342 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.86e-22 | 2 |
immature CD1a-positive Langerhans cell | 4.86e-22 | 2 |
epithelial cell of esophagus | 1.19e-11 | 1 |
acinar cell | 1.92e-09 | 5 |
Langerhans cell | 2.17e-09 | 5 |
protein secreting cell | 5.17e-08 | 6 |
immature conventional dendritic cell | 5.74e-08 | 5 |
common dendritic progenitor | 5.74e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.80e-15 | 3 |
gustatory system | 2.80e-15 | 3 |
future tongue | 2.80e-15 | 3 |
surface | 2.93e-12 | 1 |
oral opening | 6.03e-12 | 22 |
tonsil | 6.26e-12 | 1 |
mucosa-associated lymphoid tissue | 6.26e-12 | 1 |
lymphoid tissue | 6.26e-12 | 1 |
tonsillar ring | 6.26e-12 | 1 |
penis | 7.76e-12 | 1 |
intromittent organ | 7.76e-12 | 1 |
lateral plate mesenchyme | 7.76e-12 | 1 |
undifferentiated genital tubercle | 7.76e-12 | 1 |
somatopleure | 7.76e-12 | 1 |
zone of skin | 1.02e-11 | 4 |
chordate pharynx | 3.41e-10 | 10 |
pharyngeal region of foregut | 3.41e-10 | 10 |
pharynx | 2.59e-09 | 11 |
mouth | 4.91e-09 | 29 |
stomodeum | 4.91e-09 | 29 |
uterine cervix | 3.90e-08 | 6 |
neck of organ | 3.90e-08 | 6 |
surface structure | 1.86e-07 | 99 |
orifice | 3.00e-07 | 36 |
skin epidermis | 7.50e-07 | 15 |
outer epithelium | 7.50e-07 | 15 |
enveloping layer of ectoderm | 7.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-12 | 1 |
keratoacanthoma | 5.62e-12 | 1 |