FFCP PHASE1:Hg19::chr1:47655686..47655743,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10158 | |EntrezGene=10158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16887 | |HGNC=16887 | ||
|TSSclassifier=strong | |||
|UniProt=Q13113 | |UniProt=Q13113 | ||
|association_with_transcript=0bp_to_ENST00000294338_5end | |association_with_transcript=0bp_to_ENST00000294338_5end | ||
|cluster_id=chr1:47655686..47655743,- | |||
|description=CAGE_peak_1_at_PDZK1IP1_5end | |description=CAGE_peak_1_at_PDZK1IP1_5end | ||
|id=chr1:47655686..47655743,- | |id=chr1:47655686..47655743,- | ||
|ontology_enrichment_celltype=CL:0000066!6.93e-10!254;CL:0002076!1.48e-07!43 | |ontology_enrichment_celltype=CL:0000066!6.93e-10!254;CL:0002076!1.48e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.08e-10;10!CL:1000494;3.08e-10;10!CL:0002076;7.06e-09;42!CL:1000497;1.87e-07;17!CL:0002518;1.87e-07;17!CL:0002368;9.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.80e-11,253;CL:0002076,1.06e-10,42;CL:1000507,3.05e-10,10;CL:1000494,3.05e-10,10;CL:0000223,1.61e-07,58;CL:1000497,1.86e-07,17;CL:0002518,1.86e-07,17;CL:0002368,9.08e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0006595;9.04e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.77e-12!169;UBERON:0000925!2.77e-12!169;UBERON:0006595!2.77e-12!169;UBERON:0007023!3.46e-12!115;UBERON:0001007!7.96e-10!155;UBERON:0001555!7.96e-10!155;UBERON:0007026!7.96e-10!155;UBERON:0000466!2.08e-09!126;UBERON:0004921!3.37e-09!129;UBERON:0004185!3.37e-09!129;UBERON:0003104!3.69e-09!238;UBERON:0009142!3.69e-09!238;UBERON:0001004!9.30e-09!72;UBERON:0000481!3.45e-08!347;UBERON:0000464!4.23e-08!104;UBERON:0001041!1.42e-07!98;UBERON:0005911!5.25e-07!82;UBERON:0000065!6.19e-07!53;UBERON:0000077!6.23e-07!130;UBERON:0002553!9.08e-07!70 | |ontology_enrichment_uberon=UBERON:0004119!2.77e-12!169;UBERON:0000925!2.77e-12!169;UBERON:0006595!2.77e-12!169;UBERON:0007023!3.46e-12!115;UBERON:0001007!7.96e-10!155;UBERON:0001555!7.96e-10!155;UBERON:0007026!7.96e-10!155;UBERON:0000466!2.08e-09!126;UBERON:0004921!3.37e-09!129;UBERON:0004185!3.37e-09!129;UBERON:0003104!3.69e-09!238;UBERON:0009142!3.69e-09!238;UBERON:0001004!9.30e-09!72;UBERON:0000481!3.45e-08!347;UBERON:0000464!4.23e-08!104;UBERON:0001041!1.42e-07!98;UBERON:0005911!5.25e-07!82;UBERON:0000065!6.19e-07!53;UBERON:0000077!6.23e-07!130;UBERON:0002553!9.08e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.08e-10;10!UBERON:0009773;3.08e-10;10!UBERON:0001231;3.08e-10;10!UBERON:0004810;3.08e-10;10!UBERON:0006554;1.53e-09;30!UBERON:0001008;1.53e-09;30!UBERON:0004921;6.95e-08;33!UBERON:0002294;8.51e-08;7!UBERON:0001173;8.51e-08;7!UBERON:0000178;1.18e-07;15!UBERON:0000179;1.18e-07;15!UBERON:0000463;1.18e-07;15!UBERON:0000065;3.50e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.40e-18,160;UBERON:0000925,1.40e-18,160;UBERON:0006595,1.40e-18,160;UBERON:0001007,7.47e-15,145;UBERON:0001555,7.47e-15,145;UBERON:0007026,7.47e-15,145;UBERON:0004921,2.72e-14,118;UBERON:0001004,2.80e-11,74;UBERON:0001041,4.71e-11,87;UBERON:0004810,3.05e-10,10;UBERON:0001008,1.01e-09,48;UBERON:0006554,2.59e-09,47;UBERON:0000065,8.19e-09,54;UBERON:0005911,1.18e-08,82;UBERON:0009569,1.56e-08,112;UBERON:0005177,1.56e-08,101;UBERON:0002100,5.56e-08,199;UBERON:0000178,1.14e-07,15;UBERON:0000179,1.14e-07,15;UBERON:0000463,1.14e-07,15;UBERON:0002113,1.38e-07,26;UBERON:0003918,1.38e-07,26;UBERON:0011143,1.38e-07,26;UBERON:0005095,1.38e-07,26;UBERON:0007687,1.38e-07,26;UBERON:0008947,2.24e-07,38;UBERON:0003258,2.24e-07,38;UBERON:0000489,6.64e-07,31 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.563817616383885,1.0007329835313,0,17.4467704820074,0,0,0.522371256399677,1.22866968250754,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0,0,0,0,0,0,1.57345710739562,3.0706351847777,0.154816123316076,11.9524759182261,12.04823675113,1.84877005083394,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0.47296445977717,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.853460445133014,0,3.4485146397269,0,0,0,0,0,9.25199300053181,6.1655941927969,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0.361439152384566,0,1.30361867064741,0.795285947051099,2.43317435151318,0,0,0,509.6395827616,22.2220125858451,4.44941331341315,0,0.870648686496336,0.797747763113191,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0.673588117878509,0,0,0,0,0,0,11.3384453557059,0,0.506522046658319,1.98613771219828,0.860509862246441,0.354668382198357,1.12135520028461,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,37.8791272200062,90.5517120361571,31.5485054927904,0,0,0,0.10366105501537,0,0,0,3.85944562915731,0,1.39310378409594,0,8.04486240270938,6.57480291304597,4.57920956778616,9.70586960045067,9.15093665188106,6.40630671599961,8.35954110593019,8.63374446551523,6.92544882503503,0,0,3.7041661019826,1.47008711385542,0,0.982827216677626,0.590789906681404,0,14.6356241866305,0,10.5360273992281,2.24803506515239,0.904760751704678,0.462942225792648,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,17.8094284574876,41.9955320497149,24.5270918229329,0.626909658919938,0,0,0,0.792435906119034,3.7319060797339,4.90007841617669,10.4781219743895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7180289188861,11.3299349618038,15.0959216684906,0,0,0,0,0,0,1.44781306667579,0.410952645100767,2.50685348535854,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,1.49801404789436,14.9580729602012,6.63064821497657,0,0,0,0,0.356857977594324,0.630809660135739,1.40569697991256,0.902838299183157,2.27407504055985,1.03473071292505,0,0,0,0,0,5.58273670531796,3.66714141391649,0.853820462427555,0,0,0,0.496215615637554,0.153461973288062,0,0.256278298511402,0,0,19.2943486378488,0,0.177561725313127,0.0821271560138091,0,0,1.20859449591622,117.897804538331,1.65745780084613,0,0,0,37.4495678713152,13.4006686561682,52.5514345348493,33.61202167025,64.492045253547,0,0,0.215915916102139,0,20.8628756908767,229.272226651668,223.781367733544,320.795339446488,12.536986264442,20.6104284047178,34.5094795352869,0,0.328014645699706,0,10.9223472346586,0,0,80.9714408574603,56.5552414051773,3.21367859688319,0,0,0,0,0,0,0,0,95.6999659940063,41.1286744161327,26.4158314863789,39.1480611910978,1.39453664789186,3.46293581513704,2.0911118104818,1.23213432070436,3.72614221221915,2.60979897622522,3.52116016297448,5.58187058293766,0,2.21465597303108,0.38126038784765,0,0,0.636406495851874,0,0,0,0.235624804691373,2.42618977887979,1.58510321173008,2.94880919367287,0,1.70599442741899,1.05650146756755,0,0,0,0,17.9128523315129,32.8838163940322,0,0,0.202910376962704,0.6196469961995,0,0,0,0.7133421029625,0,0.844430541190656,0.987884678879706,0,0,8.94865648347262,2.01090682660736,47.9120333389819,11.8621188978742,36.1624513043833,57.2803017269927,24.8320885980538,9.41865940848534,603.355207377049,702.701593363843,468.249987857162,275.87239598012,343.076135753886,514.239335775825,546.511814484972,661.466397029422,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.9424864653152,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.281338832821026,5.45412654612239,0,0,8.36841550654493,9.11736921252787,0,0,0,0,58.1448231923205,100.430878993017,0,1.1837208676432,318.51251282143,0,0,0,0,0,0,9.42499448065232,1.0241410345695,0,0.236387681767936,1.37897349296586,0,0,1.77148277162768,0,0,0.331737779793674,0,0.658156191461918,9.69552325319012,0,36.397472272296,27.1182092915863,0,0,0,6.38002319463839,8.06058821936388,11.72676507241,0,0.31396051279005,7.47952568550704,0,0,0,0,2.70192184266644,48.1075587123902,832.650554419813,1.27217764290547,0,31.8483817945122,34.8522804143156,17.1088440581415,0,0,0,0.134802265961354,2.40773294189637,0.234264445725339,0,0,0.728341138602278,0.394584402849391,3.62972148145992,0,4.48624715362264,0,0,0,0,0,0,67.7370719550907,0,0,35.9632098510766,0.69647365264322,18.5210268336552,0.171986032471617,0,0,0.0821154570532092,103.487280593144,0,6.10148000107438,0,0,0.2532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| ||
|short_description=p1@PDZK1IP1 | |short_description=p1@PDZK1IP1 | ||
}} | }} |
Latest revision as of 09:49, 18 September 2015
Short description: | p1@PDZK1IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDZK1IP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000294338_5end |
EntrezGene: | PDZK1IP1 |
HGNC: | 16887 |
UniProt: | Q13113 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.80e-11 | 253 |
endo-epithelial cell | 1.06e-10 | 42 |
kidney tubule cell | 3.05e-10 | 10 |
nephron tubule epithelial cell | 3.05e-10 | 10 |
endodermal cell | 1.61e-07 | 58 |
kidney cell | 1.86e-07 | 17 |
kidney epithelial cell | 1.86e-07 | 17 |
respiratory epithelial cell | 9.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.40e-18 | 160 |
endoderm | 1.40e-18 | 160 |
presumptive endoderm | 1.40e-18 | 160 |
digestive system | 7.47e-15 | 145 |
digestive tract | 7.47e-15 | 145 |
primitive gut | 7.47e-15 | 145 |
subdivision of digestive tract | 2.72e-14 | 118 |
respiratory system | 2.80e-11 | 74 |
foregut | 4.71e-11 | 87 |
nephron tubule epithelium | 3.05e-10 | 10 |
renal system | 1.01e-09 | 48 |
urinary system structure | 2.59e-09 | 47 |
respiratory tract | 8.19e-09 | 54 |
endo-epithelium | 1.18e-08 | 82 |
subdivision of trunk | 1.56e-08 | 112 |
trunk region element | 1.56e-08 | 101 |
trunk | 5.56e-08 | 199 |
blood | 1.14e-07 | 15 |
haemolymphatic fluid | 1.14e-07 | 15 |
organism substance | 1.14e-07 | 15 |
kidney | 1.38e-07 | 26 |
kidney mesenchyme | 1.38e-07 | 26 |
upper urinary tract | 1.38e-07 | 26 |
kidney rudiment | 1.38e-07 | 26 |
kidney field | 1.38e-07 | 26 |
respiratory primordium | 2.24e-07 | 38 |
endoderm of foregut | 2.24e-07 | 38 |
cavitated compound organ | 6.64e-07 | 31 |