FFCP PHASE1:Hg19::chr14:100841901..100841912,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12729 | |||
|TSSclassifier=strong | |||
|UniProt=P23381 | |||
|association_with_transcript=14bp_to_NM_004184,NM_213646,uc001yhh.1,uc001yhi.1,uc010twz.1_5end | |||
|cluster_id=chr14:100841901..100841912,- | |||
|description=CAGE_peak_8_at_WARS_5end | |||
|id=chr14:100841901..100841912,- | |||
|ontology_enrichment_celltype=CL:0000766!1.42e-18!76;CL:0002057!3.55e-18!42;CL:0002194!1.42e-17!63;CL:0000576!1.42e-17!63;CL:0000040!1.42e-17!63;CL:0000559!1.42e-17!63;CL:0002009!6.47e-17!65;CL:0000860!7.19e-17!45;CL:0000557!2.73e-15!71;CL:0000839!3.54e-15!70;CL:0000048!1.55e-10!430;CL:0002139!3.89e-10!24;CL:0000763!4.27e-10!112;CL:0000049!4.27e-10!112;CL:0000723!1.19e-09!436;CL:0000115!1.67e-09!35;CL:0000134!3.33e-09!358;CL:0000063!3.64e-09!578;CL:0000034!5.67e-09!444;CL:0000548!5.71e-09!679;CL:0000004!5.71e-09!679;CL:0000255!5.71e-09!679;CL:0002078!5.77e-09!44;CL:0000012!2.30e-08!682;CL:0002320!2.57e-08!365;CL:0002371!1.21e-07!591;CL:0000219!2.22e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.23e-17;33!CL:0002057;3.23e-17;33!CL:0000473;1.93e-16;39!CL:0000234;1.93e-16;39!CL:0002139;5.87e-14;24!CL:0000115;2.69e-11;36!CL:0000766;2.45e-10;69!CL:0000576;3.49e-10;48!CL:0000071;1.58e-08;18!CL:0002138;1.17e-07;6!CL:0002078;4.76e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.85e-24,48;CL:0000234,9.85e-24,48;CL:0000766,1.65e-23,72;CL:0002194,6.82e-21,59;CL:0000576,6.82e-21,59;CL:0000040,6.82e-21,59;CL:0000559,6.82e-21,59;CL:0000860,6.97e-21,42;CL:0002057,6.97e-21,42;CL:0002009,1.14e-19,61;CL:0000839,5.06e-19,66;CL:0000557,1.73e-18,67;CL:0002139,1.99e-14,24;CL:0000115,6.46e-14,36;CL:0000763,6.42e-12,108;CL:0000049,6.42e-12,108;CL:0002078,3.17e-10,45;CL:0000048,1.40e-09,427;CL:0000134,2.79e-09,354;CL:0000723,3.26e-09,433;CL:0000071,5.90e-09,18;CL:0002546,5.90e-09,18;CL:0002320,1.77e-08,361;CL:0000034,2.29e-08,441;CL:0000738,3.79e-08,136;CL:0005020,1.25e-07,6;CL:0002138,1.25e-07,6;CL:0005022,1.25e-07,6;CL:0002031,1.47e-07,120;CL:0002087,1.68e-07,115;CL:0000219,3.53e-07,386;CL:0000213,3.85e-07,58;CL:0000215,3.85e-07,58;CL:1000413,5.59e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-15;42!CL:0002546;1.58e-08;18!CL:0005022;1.17e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.71e-17!216;UBERON:0002193!4.72e-14!112;UBERON:0002405!5.95e-14!115;UBERON:0001474!1.20e-13!86;UBERON:0002371!3.85e-13!80;UBERON:0004765!1.11e-10!101;UBERON:0001434!1.11e-10!101;UBERON:0002390!1.53e-10!102;UBERON:0003061!1.53e-10!102;UBERON:0000926!7.71e-10!448;UBERON:0004120!7.71e-10!448;UBERON:0006603!7.71e-10!448;UBERON:0000055!6.09e-09!69;UBERON:0002204!7.08e-09!167;UBERON:0002384!4.04e-08!375;UBERON:0004872!4.54e-07!84;UBERON:0001009!9.98e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.58e-08;18!UBERON:0001986;1.58e-08;18!UBERON:0004852;1.58e-08;18!UBERON:0000487;2.62e-07;22!UBERON:0006914;6.37e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.78e-19,203;UBERON:0002405,1.28e-18,93;UBERON:0002371,4.10e-17,76;UBERON:0001474,5.12e-17,82;UBERON:0002193,8.59e-16,108;UBERON:0000926,4.53e-14,315;UBERON:0004120,4.53e-14,315;UBERON:0006603,4.53e-14,315;UBERON:0004765,6.02e-14,90;UBERON:0001434,2.90e-12,100;UBERON:0002390,7.50e-12,98;UBERON:0003061,7.50e-12,98;UBERON:0000055,1.14e-10,68;UBERON:0004638,5.90e-09,18;UBERON:0001986,5.90e-09,18;UBERON:0004852,5.90e-09,18;UBERON:0002049,9.08e-08,78;UBERON:0007798,9.08e-08,78;UBERON:0002384,9.99e-08,371;UBERON:0000487,1.17e-07,22;UBERON:0002204,1.84e-07,167;UBERON:0007500,2.02e-07,59;UBERON:0001981,2.02e-07,59;UBERON:0004537,2.02e-07,59;UBERON:0006965,2.02e-07,59;UBERON:0006914,3.13e-07,25;UBERON:0004872,5.26e-07,83;UBERON:0003915,5.59e-07,9;UBERON:0004700,5.59e-07,9;UBERON:0001917,5.59e-07,9;UBERON:0004535,9.81e-07,109 | |||
|phase1_expression=1.63510541343501,0.642301571672949,2.67813367782345,0,1.34088328328186,0,0,1.26343974685366,0.522371256399677,0.491467873003018,0.697801167972428,0.655324116390517,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.993374274723366,1.14940825229924,1.10195093839151,0,3.0706351847777,1.08371286321253,0,0,1.47901604066715,1.00707360754392,0.710846162437108,0,2.21598163412751,1.20326668482085,0.868043482863407,0.223915474239924,0.647787332037959,0,2.03557534291391,3.77875943688809,2.18325655069035,5.57829688573643,6.57868620834921,13.0076675775944,1.7261543539329,1.0246428261164,0.709446689665756,8.61864201841546,8.39130088658974,5.41705946377367,5.64727018627814,8.46009065179322,5.61808711112712,9.18251677112708,16.0464513538047,12.7867425159808,0.659702600373432,2.19410023383795,0.852449501065388,17.9929727949722,14.1846306172785,13.7020894779026,0.502497330513487,1.5644487552606,2.17188844705117,10.2917915447673,18.7821594353658,13.2914202725171,1.69004229049553,1.70083439972035,1.25795187305026,1.46027220490444,1.80212271409808,0.964353520182481,1.14005097496499,1.9891667719909,1.64397738388171,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0.670700859703636,2.81297636055767,5.42158728576849,1.00267582127178,2.89693037921647,3.1811437882044,0.973269740605272,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,3.8945687238562,4.17911369518241,5.05240249971688,0.238490624305342,0,0,2.38514888840046,1.72046919021225,1.38856200643038,3.95715559346807,3.35599548967925,3.02629846134074,1.46296476575767,10.3366703667732,12.4518191940349,21.0873986041742,20.5442951725665,13.6848979029332,18.0605922585645,1.83831540172934,2.43042584364528,3.03619076165871,1.57170560838319,2.36484109014977,0,0,0.732806975721629,1.31780417436063,7.75560528296651,0,1.49091585508596,2.5326102332916,1.32409180813219,2.86836620748814,1.77334191099179,1.12135520028461,1.06748995729705,1.72667283892012,0,0.942974704487816,0.490385709340376,0.756787138224657,0,1.64025002283658,0.312160076830321,1.1409436430889,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0,1.03325781175765,0,1.97813543422845,0.910161361938026,1.43723628363248,0.336672227908132,0.125118519871964,0,0.877955241761676,0.612975591598039,1.35214253015937,1.36118619792025,0.358779271377724,0.640672166455702,1.27159140695737,0.900273288253207,1.23663035086127,3.09168648054755,1.30281799432113,1.35021065793013,2.24105111870757,2.52433774244115,1.38074847963449,0.646584227275248,1.42003837006646,0.906768884048762,0.339121184620975,0.386521706326594,0,0,0.243947412259191,0.397589304964456,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0.354920400119532,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0,8.11971000087113,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,1.1240175325762,0,0,2.93227474779292,0,0,0.231860809950154,0.821860859650752,14.8697441193906,6.48179717607255,15.2203321787679,0,0,0.492434012174795,13.5722473780758,3.71577905721821,0,0,0.141775097242386,0.985143749731331,0.290633938513962,0.383382679165211,10.3459279958148,1.05658120815871,0.207328115540772,0,0,0.317489471460845,0.381988425558278,0,0,0,0,0.285826432630578,0.672786506072164,0,0.07333828582095,1.29271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,1.00084595560703,0.542621605391443,0,0.65147236858747,1.06617584622764,0,0,0,0,9.72990245129524,1.50677127429638,2.10833939483032,2.63587341040741,2.29723871668228,0,0.434343920002738,0.61642896765115,0,0.560425719967636,0,0,0,0,0,0,0,0,2.24702107184155,2.99161459204025,2.07207756718018,0,0,0.813795071099207,0.623912584592421,0.356857977594324,0.788512075169673,0.468565659970853,1.50473049863859,0,0,0,0.737476674166813,0.347534457872331,0.391602314925481,0,0.620304078368662,0.862856803274467,0.533637789017222,0,0,0,2.48107807818777,4.75732117192994,1.12264037773229,3.33161788064823,3.07024349440022,1.76939313257968,0,0.154209693802656,1.24293207719189,0.739144404124282,1.55776328755086,0.116210378459959,0,0,1.47329582297434,2.52591785962135,1.82091168006717,1.83574180943194,0.902399225814824,0.231046011313244,0.784349769176855,0,0.105551628892876,5.68666920354483,4.08224892663638,1.72732732881711,9.25363516141736,0,0.501689773854853,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,1.33953315142039,0.0915694648183434,0.330037999682352,0,0,3.21367859688319,2.32009723901093,0.462145851343933,0.307007349452259,0,0.214840489736547,0.145016693914229,0.426133137080504,2.49289699810865,3.63626813794152,1.34533047155574,0.382838137483752,3.0347334256665,3.253918845081,2.51849877464512,0.6970372701606,3.08033580176089,0,0.869932992075073,0.37064843820784,1.14499909393593,0.372158369359667,0,0.190630193923825,0.511795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| |||
|short_description=p8@WARS | |||
}} |
Latest revision as of 10:23, 18 September 2015
Short description: | p8@WARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_WARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_NM_004184, NM_213646, uc001yhh.1, uc001yhi.1, uc010twz.1_5end |
EntrezGene: | WARS |
HGNC: | 12729 |
UniProt: | P23381 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.78e-19 | 203 |
immune system | 1.28e-18 | 93 |
bone marrow | 4.10e-17 | 76 |
bone element | 5.12e-17 | 82 |
hemolymphoid system | 8.59e-16 | 108 |
mesoderm | 4.53e-14 | 315 |
mesoderm-derived structure | 4.53e-14 | 315 |
presumptive mesoderm | 4.53e-14 | 315 |
skeletal element | 6.02e-14 | 90 |
skeletal system | 2.90e-12 | 100 |
hematopoietic system | 7.50e-12 | 98 |
blood island | 7.50e-12 | 98 |
vessel | 1.14e-10 | 68 |
blood vessel endothelium | 5.90e-09 | 18 |
endothelium | 5.90e-09 | 18 |
cardiovascular system endothelium | 5.90e-09 | 18 |
vasculature | 9.08e-08 | 78 |
vascular system | 9.08e-08 | 78 |
connective tissue | 9.99e-08 | 371 |
simple squamous epithelium | 1.17e-07 | 22 |
musculoskeletal system | 1.84e-07 | 167 |
epithelial tube open at both ends | 2.02e-07 | 59 |
blood vessel | 2.02e-07 | 59 |
blood vasculature | 2.02e-07 | 59 |
vascular cord | 2.02e-07 | 59 |
squamous epithelium | 3.13e-07 | 25 |
splanchnic layer of lateral plate mesoderm | 5.26e-07 | 83 |
endothelial tube | 5.59e-07 | 9 |
arterial system endothelium | 5.59e-07 | 9 |
endothelium of artery | 5.59e-07 | 9 |
cardiovascular system | 9.81e-07 | 109 |