FFCP PHASE1:Hg19::chr16:89007715..89007772,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |||
|TSSclassifier=strong | |||
|UniProt=O75081 | |||
|association_with_transcript=-107bp_to_NM_175931,uc002fml.1_5end | |||
|cluster_id=chr16:89007715..89007772,- | |||
|description=CAGE_peak_1_at_CBFA2T3_5end | |||
|id=chr16:89007715..89007772,- | |||
|ontology_enrichment_celltype=CL:0000738!3.35e-23!140;CL:0000037!4.92e-22!172;CL:0000566!4.92e-22!172;CL:0000988!1.29e-20!182;CL:0002032!8.95e-19!165;CL:0000837!8.95e-19!165;CL:0002057!8.41e-16!42;CL:0000766!6.78e-15!76;CL:0002031!8.48e-15!124;CL:0000763!3.58e-14!112;CL:0000049!3.58e-14!112;CL:0002087!4.13e-14!119;CL:0000860!1.24e-13!45;CL:0000557!2.73e-12!71;CL:0000839!1.94e-10!70;CL:0002009!7.05e-10!65;CL:0002194!4.89e-09!63;CL:0000576!4.89e-09!63;CL:0000040!4.89e-09!63;CL:0000559!4.89e-09!63;CL:0000236!3.73e-08!14;CL:0000945!9.70e-08!24;CL:0000826!9.70e-08!24;CL:0002393!7.42e-07!9;CL:0002397!7.42e-07!9;CL:0000094!7.59e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-10;33!CL:0002057;3.27e-10;33!CL:0000766;1.01e-08;69!CL:0000576;2.19e-08;48!CL:0000236;3.98e-08;13!CL:0000945;9.03e-08;24!CL:0000094;1.05e-07;8!CL:0000473;2.62e-07;39!CL:0000234;2.62e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.23e-21,168;CL:0000738,2.96e-21,136;CL:0000988,1.57e-19,177;CL:0002032,7.61e-18,161;CL:0000837,7.61e-18,161;CL:0000766,1.21e-16,72;CL:0000860,1.23e-16,42;CL:0002057,1.23e-16,42;CL:0000763,2.74e-16,108;CL:0000049,2.74e-16,108;CL:0000473,3.07e-14,48;CL:0000234,3.07e-14,48;CL:0000557,1.37e-13,67;CL:0002031,1.37e-12,120;CL:0002087,4.15e-12,115;CL:0000839,4.32e-11,66;CL:0002009,9.01e-11,61;CL:0002194,8.63e-10,59;CL:0000576,8.63e-10,59;CL:0000040,8.63e-10,59;CL:0000559,8.63e-10,59;CL:0000236,2.31e-08,14;CL:0000945,7.63e-08,24;CL:0000826,7.63e-08,24;CL:0002393,9.33e-08,9;CL:0002397,9.33e-08,9;CL:0000094,9.58e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-37!115;UBERON:0002390!9.51e-16!102;UBERON:0003061!9.51e-16!102;UBERON:0001049!8.63e-14!57;UBERON:0005068!8.63e-14!57;UBERON:0006241!8.63e-14!57;UBERON:0007135!8.63e-14!57;UBERON:0002193!1.04e-13!112;UBERON:0001017!2.34e-13!82;UBERON:0005743!1.94e-12!86;UBERON:0003080!3.70e-12!42;UBERON:0002780!1.39e-11!41;UBERON:0001890!1.39e-11!41;UBERON:0006240!1.39e-11!41;UBERON:0000955!5.73e-11!69;UBERON:0006238!5.73e-11!69;UBERON:0002616!9.75e-11!59;UBERON:0000073!5.87e-10!94;UBERON:0001016!5.87e-10!94;UBERON:0002371!1.52e-09!80;UBERON:0001893!2.00e-09!34;UBERON:0002020!2.24e-09!34;UBERON:0003528!2.24e-09!34;UBERON:0001474!2.24e-09!86;UBERON:0003075!3.42e-09!86;UBERON:0007284!3.42e-09!86;UBERON:0001869!3.90e-09!32;UBERON:0002791!5.24e-09!33;UBERON:0002619!1.05e-08!22;UBERON:0002346!1.69e-08!90;UBERON:0001950!2.32e-08!20;UBERON:0000178!2.73e-08!15;UBERON:0000179!2.73e-08!15;UBERON:0000463!2.73e-08!15;UBERON:0000956!8.91e-07!25;UBERON:0000203!8.91e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.80e-11;114!UBERON:0002619;5.62e-10;22!UBERON:0001950;1.38e-09;20!UBERON:0002780;3.87e-09;41!UBERON:0001890;3.87e-09;41!UBERON:0001893;4.37e-09;34!UBERON:0001869;5.16e-09;32!UBERON:0003528;6.25e-09;34!UBERON:0002020;6.25e-09;34!UBERON:0002791;8.78e-09;32!UBERON:0000073;1.32e-08;53!UBERON:0002616;1.32e-08;53!UBERON:0000956;4.99e-08;25!UBERON:0000203;4.99e-08;25!UBERON:0000178;2.19e-07;15!UBERON:0000179;2.19e-07;15!UBERON:0000463;2.19e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.26e-41,114;UBERON:0002390,2.71e-17,98;UBERON:0003061,2.71e-17,98;UBERON:0002193,4.26e-15,108;UBERON:0001049,2.86e-14,56;UBERON:0005068,2.86e-14,56;UBERON:0006241,2.86e-14,56;UBERON:0007135,2.86e-14,56;UBERON:0000073,1.10e-13,53;UBERON:0002616,1.10e-13,53;UBERON:0002780,2.00e-12,41;UBERON:0001890,2.00e-12,41;UBERON:0003080,2.00e-12,41;UBERON:0006240,2.00e-12,41;UBERON:0001017,9.39e-12,81;UBERON:0002371,5.75e-11,76;UBERON:0001893,1.45e-10,34;UBERON:0003528,1.65e-10,34;UBERON:0002020,1.65e-10,34;UBERON:0001474,2.97e-10,82;UBERON:0001869,3.17e-10,32;UBERON:0000955,3.49e-10,68;UBERON:0006238,3.49e-10,68;UBERON:0002405,3.67e-10,93;UBERON:0002619,4.83e-10,22;UBERON:0002791,7.03e-10,32;UBERON:0001016,1.09e-09,89;UBERON:0001950,1.21e-09,20;UBERON:0003075,3.73e-09,82;UBERON:0007284,3.73e-09,82;UBERON:0002346,1.36e-08,86;UBERON:0000956,4.40e-08,25;UBERON:0000203,4.40e-08,25;UBERON:0004765,4.83e-08,90;UBERON:0000178,2.14e-07,15;UBERON:0000179,2.14e-07,15;UBERON:0000463,2.14e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,4.27915072188527,3.69452652524756,4.72264687882075,10.6208354749204,3.83829398097213,12.0756576186539,0,0,0,1.62681121218633,0,9.10161361938026,11.0799081706375,11.8321224007384,11.718587018656,0,0.647787332037959,0,3.19876125315042,2.64513160582167,5.57943340731977,1.62700325833979,4.93401465626191,2.47765096716083,1.1507695692886,6.40401766322752,1.6553756092201,5.17118521104928,9.03678557017357,8.12558919566051,2.63539275359647,4.91231070104122,0.898893937780338,2.75475503133812,3.53021929783703,5.75403413219137,2.30895910130701,7.38015533200038,4.26224750532694,0.870627715885752,1.13477044938228,3.73693349397345,3.51748131359441,8.34372669472322,4.56096573880745,1.81619850790011,2.94622108790052,2.53169909952708,8.02770087985379,11.4806321981124,8.38634582033504,11.4575203769425,8.56008289196586,14.1438516293431,12.2555479808737,9.54800050555633,9.31587184199633,14.0796995569058,13.1073266702912,9.7846017924991,6.40095333849761,10.0098996759003,4.59801951963587,6.61044872784862,4.77026877267682,10.8150464130795,18.79159005987,20.6427543187624,22.4691258584344,5.04457706683382,10.271979306228,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,2.09071047609954,0,0,0,0,0.318565414324097,0.651083453856419,0,0.451725357233318,0.639933055772092,0,0.473554504088034,0.821127996921047,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,3.01251873644739,0,0,0.324547393654683,0.348259474598534,0.531831842075461,54.375862341618,37.7516641114884,46.8036451675252,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,19.3890132074163,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,1.09776335516636,0.265059536642971,0.929551542956147,1.96956004529204,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,9.71218818712231,0.245976877086227,0,0,0,0,0,0,0,0,1.04337364477569,0,0,0,0,9.4824527755113,18.8866955660872,1.23108503043699,0.234004265139238,1.18904929830983,0,0,0,0,0,0,1.47798971368783,1.67292024625129,15.3422805500171,18.0149941771202,19.1888498808098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.128343036279748,0.508189248444927,14.3153839243384,8.50617694055465,5.52803675603351,7.01732626818479,20.9721966705211,50.8574480646842,32.3244100480108,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,1.37257369524342,7.65041696654683,7.11856862701436,8.00456683525833,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,2.77976734060731,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,3.40035338437484,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0.0852266274161009,1.15741646340759,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14232723417828,0,0,0.443430153536676,0.229723400206959,13.7010854492686,12.9988325214204,26.7734177971856,11.6733569974317,13.5749550118444,19.4541993357815,13.5007859309529,19.0350042310625,0.320472213382419,0,0.490080431962063,16.9080889364404,0.865615277858669,22.0539714380084,8.60901872735641,8.18275422874548,8.23473091569177,24.7658091786943,5.843194924942,8.70471252151722,19.8564170758877,0,10.0253790836027,13.7126340019299,0,5.65039180134933,0,0,0,0,0,0,0,0,10.2773157820874,0,0,0,6.59286806723523,0.970884173996107,0,0,0,0.593929361665277,0,3.97659059106519,4.64209074154692,0,0,0,2.39097585901284,11.8802083678393,0.251932747854276,0,0.369254416383208,0,0,0,7.67358555340308,3.45251919729268,9.57932369387759,0,5.81599647657131,5.10224539890182,3.99227596002388,49.2208468451091,0,13.0499923578263,0.1137934482855,0.254253650292766,6.14607972596635,3.10269035917318,0,0.520874984799877,3.54296554325536,12.6626260556678,15.2581736317083,37.5969483766164,17.1417618993058,5.26524953169534,0.653630781113941,0.139423744278603,4.23226421770884,0,0,0,0,0,0,0.533034776018635,5.10966490978682,0,0,0,0,0,0,0,0,0,0.141353071433941,0,6.96683351754953,4.33442066066362,9.16545217400438,0.296521128680622,0.123563938946503,0.208843899010911,2.29163852134302,5.61804353109152,3.74823113160543,9.1227394607833,2.15231080825299,2.91336455440911,2.76209081994573,2.41981432097328,6.1214552326098,3.60163503882381,0,0.311064574191741,1.99396161812156,1.98595173525299,2.5114633472578,1.19472429772959,0,1.24807205711825,0,0,0,3.14508002835654,0,0,0,0,2.90967049465258,1.94163478721301,4.06765333404958,0,0,6.14114720772023,0.586654148204409,0,4.4825128895264,0.599428828746391,0.864542502924636,2.63434171181606,43.0703444633531,0,0,0.471388069233591,0.407712618220842,0.732219924186332,0.305994652908965,0,0.600420288709789,3.55953985119182,117.526861021615,0,9.72683210833464,11.4505784521624,12.1455024726192,10.7680953686522,4.99197501247478,6.86761677018513,10.2658870423261,6.44961335872572,0,0,0,0,0,0.984274815147488,0,1.59045937961861,3.40508515278939,0.160753148465019,0.275078873194468,0,16.8730418663625,6.96421759102155,8.32268926214938,0,1.41850273138557,1.36381929150995,0,0.717149357331379,0,5.00286728461357,2.64836788146173,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,2.97350799631566,4.36367585750877,0.171086837884329,2.11444506695002,7.36833146717093,9.43225830597996,12.0129326050687,5.95399226174341,0,42.8709946300754,0,2.1760712134779,4.7631079864313,1.22538230705385,0.983617892129413,0,2.65820453990096,4.14889300666675,7.63664677309649,0,2.5513681853476,3.10482014706917,0.276697269872462,0,0,0,0,27.631759442606,13.4776556608067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15571898244382,0,0.260994291965212,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0,0,1.0362910251936,0,7.88073086064865,0.974301544196942,2.39156712564054,2.61704630809351,0,0,0,1.59989916683944,13.2297744820735,0,0,0,0.139879507719444,1.24415452006595,8.18523976343371,0,0,0,0,0,3.84200869202907,0,0,7.01869530511155,4.00285374142735,0,0,7.51481933628576,0,7.98169295285756,6.76884001994492,5.29350562065608,8.85212831541989,6.62050147090589,0,0,1.41563668017288,0,0,0,0,7.55881644041844,1.0529445968896,0,36.7311585279554,0.261906694481422,0,0,7.09144638493144,2.34323429584154,7.44072467404263,6.91232331113584,7.11067251723685,0,6.45074531906083,0,0,16.6067569122269,9.41594422212707,3.64179362541979,2.50428410486427,2.30626162422861,2.7656157013387,0,2.31097092121228,6.51150458272206,0,0,4.94506484958238,7.07020154622009,0,12.7842220871329,0,0,5.21778772489591,9.00677586876542,0,1.56472445072321,0,0,0,0,4.30227358820278,0,0,4.65725755210022,0.22910686854405,0.31020638566432,0,6.04019331708079,0,0,1.29485767437579,3.2852098193999,11.598144313382,7.28566489588709,0,0,2.97300226943921,0,0.329821550236287,4.07599677630019,3.24131464053368,2.84127428655144,17.4017399653763,1.22574160876953,2.82811856521951,1.57046773691956,2.37637120261669,2.113278637917,0,6.20293858667034,8.57289910048577,0,2.85686301769052,0,0,4.3820183294791,5.96348068425903,1.43339583151451,0,7.27508945042787,10.4724165681691,7.40637576721561,0,0,0,0,0.109265571963696,0,1.1218771271618,2.40495664739004,7.62727666139213,2.25636785363138,1.97024615367422,0,0.829169439458779,3.72358785102823,4.4779136199206,4.04709533488359,86.2907835409042,58.9089038667692,0,1.71847327351045,1.61693751166575,3.26575121845442,5.81796611844978,6.39844503638581,2.15166616178029,5.98788641782824,0,0,0,0,2.34640942403454,4.40069199058319,1.62758471326295,9.98635161278269,20.1273793591026,5.12909587685173 | |||
|short_description=p1@CBFA2T3 | |||
}} |
Latest revision as of 10:37, 18 September 2015
Short description: | p1@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBFA2T3_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_NM_175931, uc002fml.1_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.23e-21 | 168 |
leukocyte | 2.96e-21 | 136 |
hematopoietic cell | 1.57e-19 | 177 |
hematopoietic oligopotent progenitor cell | 7.61e-18 | 161 |
hematopoietic multipotent progenitor cell | 7.61e-18 | 161 |
myeloid leukocyte | 1.21e-16 | 72 |
classical monocyte | 1.23e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-16 | 42 |
myeloid cell | 2.74e-16 | 108 |
common myeloid progenitor | 2.74e-16 | 108 |
defensive cell | 3.07e-14 | 48 |
phagocyte | 3.07e-14 | 48 |
granulocyte monocyte progenitor cell | 1.37e-13 | 67 |
hematopoietic lineage restricted progenitor cell | 1.37e-12 | 120 |
nongranular leukocyte | 4.15e-12 | 115 |
myeloid lineage restricted progenitor cell | 4.32e-11 | 66 |
macrophage dendritic cell progenitor | 9.01e-11 | 61 |
monopoietic cell | 8.63e-10 | 59 |
monocyte | 8.63e-10 | 59 |
monoblast | 8.63e-10 | 59 |
promonocyte | 8.63e-10 | 59 |
B cell | 2.31e-08 | 14 |
lymphocyte of B lineage | 7.63e-08 | 24 |
pro-B cell | 7.63e-08 | 24 |
intermediate monocyte | 9.33e-08 | 9 |
CD14-positive, CD16-positive monocyte | 9.33e-08 | 9 |
granulocyte | 9.58e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.26e-41 | 114 |
hematopoietic system | 2.71e-17 | 98 |
blood island | 2.71e-17 | 98 |
hemolymphoid system | 4.26e-15 | 108 |
neural tube | 2.86e-14 | 56 |
neural rod | 2.86e-14 | 56 |
future spinal cord | 2.86e-14 | 56 |
neural keel | 2.86e-14 | 56 |
regional part of nervous system | 1.10e-13 | 53 |
regional part of brain | 1.10e-13 | 53 |
regional part of forebrain | 2.00e-12 | 41 |
forebrain | 2.00e-12 | 41 |
anterior neural tube | 2.00e-12 | 41 |
future forebrain | 2.00e-12 | 41 |
central nervous system | 9.39e-12 | 81 |
bone marrow | 5.75e-11 | 76 |
telencephalon | 1.45e-10 | 34 |
brain grey matter | 1.65e-10 | 34 |
gray matter | 1.65e-10 | 34 |
bone element | 2.97e-10 | 82 |
cerebral hemisphere | 3.17e-10 | 32 |
brain | 3.49e-10 | 68 |
future brain | 3.49e-10 | 68 |
immune system | 3.67e-10 | 93 |
regional part of cerebral cortex | 4.83e-10 | 22 |
regional part of telencephalon | 7.03e-10 | 32 |
nervous system | 1.09e-09 | 89 |
neocortex | 1.21e-09 | 20 |
neural plate | 3.73e-09 | 82 |
presumptive neural plate | 3.73e-09 | 82 |
neurectoderm | 1.36e-08 | 86 |
cerebral cortex | 4.40e-08 | 25 |
pallium | 4.40e-08 | 25 |
skeletal element | 4.83e-08 | 90 |
blood | 2.14e-07 | 15 |
haemolymphatic fluid | 2.14e-07 | 15 |
organism substance | 2.14e-07 | 15 |