FFCP PHASE1:Hg19::chr21:42539445..42539456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100423023 | |EntrezGene=100423023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38366 | |HGNC=38366 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_NR_036167_5end | |association_with_transcript=-27bp_to_NR_036167_5end | ||
|cluster_id=chr21:42539445..42539456,+ | |||
|description=CAGE_peak_1_at_MIR3197_5end | |description=CAGE_peak_1_at_MIR3197_5end | ||
|id=chr21:42539445..42539456,+ | |id=chr21:42539445..42539456,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.03e-14!24;CL:0005020!6.22e-11!6;CL:0002138!6.22e-11!6;CL:0005022!6.22e-11!6;CL:0000115!1.03e-09!35;CL:0002274!1.07e-09!5;CL:0000457!1.07e-09!5;CL:0002191!1.07e-09!5;CL:0000097!1.07e-09!5;CL:0000831!1.07e-09!5;CL:0002028!1.07e-09!5;CL:0002078!1.01e-08!44;CL:0000213!6.30e-08!57;CL:0000215!6.30e-08!57;CL:0000071!3.56e-07!18;CL:0002546!3.56e-07!18 | |ontology_enrichment_celltype=CL:0002139!2.03e-14!24;CL:0005020!6.22e-11!6;CL:0002138!6.22e-11!6;CL:0005022!6.22e-11!6;CL:0000115!1.03e-09!35;CL:0002274!1.07e-09!5;CL:0000457!1.07e-09!5;CL:0002191!1.07e-09!5;CL:0000097!1.07e-09!5;CL:0000831!1.07e-09!5;CL:0002028!1.07e-09!5;CL:0002078!1.01e-08!44;CL:0000213!6.30e-08!57;CL:0000215!6.30e-08!57;CL:0000071!3.56e-07!18;CL:0002546!3.56e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.00e-46;5!CL:0000163;8.66e-26;9!CL:0002138;3.77e-22;6!CL:0002139;7.62e-15;24!CL:0000115;2.90e-09;36!CL:0002078;7.67e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.97e-46,5;CL:0002028,3.97e-46,5;CL:0000163,7.63e-26,9;CL:0005020,3.51e-22,6;CL:0002138,3.51e-22,6;CL:0005022,3.51e-22,6;CL:0002139,6.79e-15,24;CL:0000115,6.27e-10,36;CL:0002078,6.22e-08,45 | |||
|ontology_enrichment_development_v019=CL:0005022;3.77e-22;6!UBERON:0005425;2.06e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.33e-10!9;UBERON:0002465!3.35e-08!10;UBERON:0000477!3.62e-08!286;UBERON:0001473!6.77e-08!8;UBERON:0004536!6.77e-08!8;UBERON:0006558!6.77e-08!8;UBERON:0001986!3.56e-07!18;UBERON:0004638!3.56e-07!18;UBERON:0004852!3.56e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.71e-17;8!UBERON:0004536;8.71e-17;8!UBERON:0006558;8.71e-17;8!UBERON:0000996;2.06e-15;1!UBERON:0002134;2.06e-15;1!UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0005208;2.06e-15;1!UBERON:0004145;2.06e-15;1!UBERON:0005946;2.06e-15;1!UBERON:0005965;2.06e-15;1!UBERON:0002078;2.06e-15;1!UBERON:0002465;1.47e-13;10!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002081;2.31e-08;2!UBERON:0002133;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,8.26e-17,8;UBERON:0004536,8.26e-17,8;UBERON:0006558,8.26e-17,8;UBERON:0000996,1.16e-15,1;UBERON:0002134,2.75e-15,1;UBERON:0005208,2.75e-15,1;UBERON:0005946,2.75e-15,1;UBERON:0005965,2.75e-15,1;UBERON:0002078,2.75e-15,1;UBERON:0000941,3.17e-15,1;UBERON:0001785,3.17e-15,1;UBERON:0002464,3.17e-15,1;UBERON:0004904,3.17e-15,1;UBERON:0001021,3.17e-15,1;UBERON:0003902,3.17e-15,1;UBERON:0005425,3.17e-15,1;UBERON:0002465,1.41e-13,10;UBERON:0002081,2.67e-08,2;UBERON:0002133,2.67e-08,2;UBERON:0010227,2.67e-08,2;UBERON:0003714,2.87e-08,2;UBERON:0005162,2.87e-08,2;UBERON:0000122,2.87e-08,2;UBERON:0000055,2.92e-07,68;UBERON:0002405,5.52e-07,93 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,1.72046919021225,0,0,0,0.275118041940067,0.208994966536811,2.06733407335463,1.77883131343355,4.01664735317604,0.402829317109147,0.760272105718513,0,0,0,0.357198913136319,0.22452937262617,0,0,1.89853131913626,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0.473227200159376,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,2.0251139823042,1.86595303986695,2.45003920808834,3.91351543621778,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0.9555033757741,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,1.1598144313382,0,0,0,0,0.5647304101948,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99727032255654,0.201273793591026,0 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| ||
|short_description=p1@MIR3197 | |short_description=p1@MIR3197 | ||
}} | }} |
Latest revision as of 12:17, 18 September 2015
Short description: | p1@MIR3197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3197_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_NR_036167_5end |
EntrezGene: | MIR3197 |
HGNC: | 38366 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.97e-46 | 5 |
basophil mast progenitor cell | 3.97e-46 | 5 |
endocrine cell | 7.63e-26 | 9 |
lymphangioblast | 3.51e-22 | 6 |
endothelial cell of lymphatic vessel | 3.51e-22 | 6 |
vascular lymphangioblast | 3.51e-22 | 6 |
endothelial cell of vascular tree | 6.79e-15 | 24 |
endothelial cell | 6.27e-10 | 36 |
meso-epithelial cell | 6.22e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 8.26e-17 | 8 |
lymph vasculature | 8.26e-17 | 8 |
lymphatic part of lymphoid system | 8.26e-17 | 8 |
vagina | 1.16e-15 | 1 |
tricuspid valve | 2.75e-15 | 1 |
right atrium valve | 2.75e-15 | 1 |
outflow tract of atrium | 2.75e-15 | 1 |
outflow part of right atrium | 2.75e-15 | 1 |
right cardiac atrium | 2.75e-15 | 1 |
cranial nerve II | 3.17e-15 | 1 |
cranial nerve | 3.17e-15 | 1 |
nerve trunk | 3.17e-15 | 1 |
nerve connecting eye with brain | 3.17e-15 | 1 |
nerve | 3.17e-15 | 1 |
retinal neural layer | 3.17e-15 | 1 |
presumptive neural retina | 3.17e-15 | 1 |
lymphoid system | 1.41e-13 | 10 |
cardiac atrium | 2.67e-08 | 2 |
atrioventricular valve | 2.67e-08 | 2 |
future cardiac atrium | 2.67e-08 | 2 |
neural tissue | 2.87e-08 | 2 |
multi cell component structure | 2.87e-08 | 2 |
neuron projection bundle | 2.87e-08 | 2 |
vessel | 2.92e-07 | 68 |
immune system | 5.52e-07 | 93 |