FFCP PHASE1:Hg19::chr12:47610315..47610386,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:47610315..47610386,+ to FFCP PHASE1:Hg19::chr12:47610315..47610386,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91523 | |EntrezGene=91523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28255 | |HGNC=28255 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRF7,F8VUZ9 | |UniProt=F8VRF7,F8VUZ9 | ||
|association_with_transcript=0bp_to_ENST00000548348,ENST00000549500,uc009zkn.2_5end | |||
|cluster_id=chr12:47610315..47610386,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_FAM113B_5end | |||
|id=chr12:47610315..47610386,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.54e-56!140;CL:0002087!7.82e-54!119;CL:0000037!6.58e-49!172;CL:0000566!6.58e-49!172;CL:0002031!1.90e-46!124;CL:0002032!8.10e-45!165;CL:0000837!8.10e-45!165;CL:0000988!3.30e-43!182;CL:0000542!4.66e-34!53;CL:0000051!4.66e-34!53;CL:0000838!1.79e-33!52;CL:0000766!4.21e-19!76;CL:0002194!4.33e-18!63;CL:0000576!4.33e-18!63;CL:0000040!4.33e-18!63;CL:0000559!4.33e-18!63;CL:0000945!3.66e-17!24;CL:0000826!3.66e-17!24;CL:0002009!6.17e-17!65;CL:0000839!3.15e-16!70;CL:0000791!7.42e-16!18;CL:0000789!7.42e-16!18;CL:0002420!7.42e-16!18;CL:0002419!7.42e-16!18;CL:0000790!7.42e-16!18;CL:0000557!1.00e-15!71;CL:0000763!4.02e-15!112;CL:0000049!4.02e-15!112;CL:0000084!4.35e-15!25;CL:0000827!4.35e-15!25;CL:0002057!1.70e-13!42;CL:0000860!2.69e-12!45;CL:0000236!4.15e-11!14;CL:0000625!7.22e-11!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.72e-24;53!CL:0000945;2.74e-21;24!CL:0000791;1.43e-19;18!CL:0000789;1.43e-19;18!CL:0002419;1.43e-19;18!CL:0000084;9.81e-18;25!CL:0002087;2.18e-17;104!CL:0000625;2.83e-13;11!CL:0000236;6.60e-13;13!CL:0000738;7.70e-13;136!CL:0000473;1.96e-12;39!CL:0000234;1.96e-12;39!CL:0000860;3.29e-12;33!CL:0002057;3.29e-12;33!CL:0000576;2.94e-10;48!CL:0000988;1.01e-07;177!CL:0000766;2.91e-07;69!CL:0000624;3.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.25e-62,115;CL:0000738,4.91e-62,136;CL:0002031,1.19e-51,120;CL:0000037,4.71e-50,168;CL:0002032,5.39e-46,161;CL:0000837,5.39e-46,161;CL:0000988,1.87e-45,177;CL:0000542,1.34e-41,53;CL:0000051,1.34e-41,53;CL:0000838,7.33e-41,52;CL:0000945,3.36e-21,24;CL:0000826,3.36e-21,24;CL:0000791,1.49e-19,18;CL:0000789,1.49e-19,18;CL:0002420,1.49e-19,18;CL:0002419,1.49e-19,18;CL:0000790,1.49e-19,18;CL:0002194,5.10e-19,59;CL:0000576,5.10e-19,59;CL:0000040,5.10e-19,59;CL:0000559,5.10e-19,59;CL:0000766,7.01e-19,72;CL:0002009,6.37e-18,61;CL:0000084,9.51e-18,25;CL:0000827,9.51e-18,25;CL:0000839,1.70e-15,66;CL:0000557,4.65e-15,67;CL:0000473,1.67e-14,48;CL:0000234,1.67e-14,48;CL:0000236,1.42e-13,14;CL:0000625,2.85e-13,11;CL:0000763,1.45e-12,108;CL:0000049,1.45e-12,108;CL:0000860,1.12e-11,42;CL:0002057,1.12e-11,42;CL:0000624,3.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;5.72e-24;53!CL:0000790;1.43e-19;18!CL:0002057;3.95e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-27!115;UBERON:0002390!1.60e-21!102;UBERON:0003061!1.60e-21!102;UBERON:0002193!4.38e-19!112;UBERON:0002371!2.91e-13!80;UBERON:0001474!1.80e-11!86;UBERON:0002405!1.01e-09!115;UBERON:0001049!3.19e-09!57;UBERON:0005068!3.19e-09!57;UBERON:0006241!3.19e-09!57;UBERON:0007135!3.19e-09!57;UBERON:0004765!1.67e-08!101;UBERON:0001434!1.67e-08!101;UBERON:0002780!7.39e-08!41;UBERON:0001890!7.39e-08!41;UBERON:0006240!7.39e-08!41;UBERON:0003080!1.88e-07!42;UBERON:0000178!2.62e-07!15;UBERON:0000179!2.62e-07!15;UBERON:0000463!2.62e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.69e-09;15!UBERON:0000179;2.69e-09;15!UBERON:0000463;2.69e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.16e-25,114;UBERON:0002390,8.08e-23,98;UBERON:0003061,8.08e-23,98;UBERON:0002193,7.07e-21,108;UBERON:0002405,3.88e-14,93;UBERON:0002371,1.37e-12,76;UBERON:0001474,1.04e-10,82;UBERON:0001049,2.44e-09,56;UBERON:0005068,2.44e-09,56;UBERON:0006241,2.44e-09,56;UBERON:0007135,2.44e-09,56;UBERON:0000178,2.68e-09,15;UBERON:0000179,2.68e-09,15;UBERON:0000463,2.68e-09,15;UBERON:0000073,8.90e-09,53;UBERON:0002616,8.90e-09,53;UBERON:0004765,1.18e-08,90;UBERON:0002780,7.39e-08,41;UBERON:0001890,7.39e-08,41;UBERON:0003080,7.39e-08,41;UBERON:0006240,7.39e-08,41;UBERON:0001893,1.87e-07,34;UBERON:0003528,2.26e-07,34;UBERON:0002020,2.26e-07,34;UBERON:0001434,4.66e-07,100 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,12.1497315139242,11.5761831124424,10.7833770399741,6.29382842958246,38.3829398097213,3.09632246632152,0,0,0,19.521734546236,5.40243083452202,0.293600439334847,4.9859586767869,7.62068900386538,5.4252717678963,9.85228086655667,10.6884909786263,6.43938919085466,4.21654892460738,4.1566353805769,1.4555043671269,1.85943229524548,1.6446715520873,2.78735733805593,2.58923153089935,2.0492856522328,3.54723344832878,0.689491361473237,5.80936215225443,2.70852973188684,2.25890807451126,2.18324920046277,1.34834090667051,1.22433556948361,4.17207735198922,1.91801137739712,7.25672860410775,6.38283704389222,9.80316926225197,4.35313857942876,3.40431134814684,1.24564449799115,3.26623264833766,3.12889751052121,3.9093992046921,3.63239701580021,8.47038562771399,1.58231193720442,0,0.425208599930087,0.419317291016752,0,0,0.32145117339416,0.285012743741249,0.19891667719909,0.365328307529268,38.719173781491,33.31445528699,40.9174256777235,30.7245760247885,28.0277190925209,29.8871268776331,27.1028397841793,28.6216126360609,17.0763890732835,20.5533016279829,12.9972897562578,0,12.8916969485753,1.31692042387539,20.8512356320663,15.7204305099666,20.9713528979499,173.372395720133,29.0070817303895,35.508585430105,31.1722765452658,78.7671930178177,47.4315511034488,47.6297873354785,59.3060461645384,59.946737631616,50.4630268532328,53.4423189961947,32.6093020987301,89.8389565778663,70.7326906283028,77.0517584898374,50.1770514263889,84.1888416242917,63.9978224315208,44.6715679127419,58.9535882405442,70.4029565656254,78.7810979166266,64.6307390224894,62.4886744172757,74.1042478584082,77.4570504624544,67.7182940845888,58.3000877813943,55.2402476435767,29.1509813404023,31.716544450333,0,0,0,0,0,0,0,0,0,0,0.175669571386252,2.68507104770311,0,0,2.92092654289215,2.43781632218974,2.92507513141503,12.6400030881831,9.72391348326217,17.8299600638191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3603516270019,0,12.1877553076757,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,19.0857694744208,10.5416969741516,0,0,0,0,0,0,9.75140752743687,47.4844132086645,26.9534468574397,26.6953515461877,0,0,0,0.837581326671744,0,0,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.5302603625222,16.6099934630335,18.3571399421924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0.0915694648183434,0,0,0.650060246036521,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0.281695602532241,0,0,0,0,0.633322905892992,0,0,0,0,0,0,2.35359501941948,0,0,0,0.229723400206959,35.5213326462519,29.0562138714103,31.9002424817531,35.7347663186683,42.370314127878,42.1507652275266,39.9623263556205,24.5868804651224,0.106824071127473,0,0,5.945701604023,7.50199907477513,2.70339004723974,0,1.1974762285969,0.191505370132367,0,0.324621940274555,0,1.14117339516596,0,0,0,1.92705690124439,3.22879531505676,0.425846237690326,3.09154810280188,3.6868891717015,2.90778940260141,3.00328455081435,2.14926904942244,0,0,0,0,0,0,1.75809815126273,0,0.66866030566487,0,0,0,0.307160702099232,2.98244294329889,3.79807424308384,0,0,0,1.39473591775749,30.9437985394885,0,0.102268682502155,2.21552649829925,0,0,0.179021174675609,0,1.97286811273867,11.974154617347,0,0,1.57705766875147,0,0,0,0,0,0,0,0,0,0,0,2.77371808838438,0,1.3269511191747,0.295547618953547,0.438770794307945,0,0,1.53900517007594,0,0,0.0897576444097721,0,0.957003479195758,0,3.73124343213044,2.04386596391473,0.31396051279005,0,0,0.19606253431774,0.503464760927528,0,0.953619473882272,0.210998064528027,0.163232808159148,0,0,1.99052386215701,2.4768118060935,1.83309043480088,0,0,0,6.7401132980677,0.802577647298789,2.34264445725339,4.01400536274465,0,0,0,0,1.83643656978294,8.34062851096041,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,1.04836000945218,0,0,0.0730893170861856,0,3.29762656060626,0,0.451961481561065,0,0.19871461170299,3.03891820588218,0,0.0801588202515337,1.28071796843612,0,0,0,0,0,0,0,0,0,0.101998217636322,0,1.20084057741958,3.9702559878678,0,0,1.8402114799552,0.558564802544508,0.458320848023367,0,0,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0,0,0,0,12.2776331495387,1.59045937961861,4.90332262001672,0,0,0,0,0,2.91597871958518,0,1.41850273138557,0.314727528809989,0,0,0,1.42939065274673,0,0,0,0,0,0,4.35090359971497,0.170388021785422,0.113312091520126,0.732761168390412,0,1.16354660725395,3.43804764530994,0,0,5.33937062838473,1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| ||
|short_description=p1@FAM113B | |||
}} | }} |
Latest revision as of 12:31, 18 September 2015
Short description: | p1@FAM113B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM113B_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000548348, ENST00000549500, uc009zkn.2_5end |
EntrezGene: | FAM113B |
HGNC: | 28255 |
UniProt: | F8VRF7F8VUZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.16e-25 | 114 |
hematopoietic system | 8.08e-23 | 98 |
blood island | 8.08e-23 | 98 |
hemolymphoid system | 7.07e-21 | 108 |
immune system | 3.88e-14 | 93 |
bone marrow | 1.37e-12 | 76 |
bone element | 1.04e-10 | 82 |
neural tube | 2.44e-09 | 56 |
neural rod | 2.44e-09 | 56 |
future spinal cord | 2.44e-09 | 56 |
neural keel | 2.44e-09 | 56 |
blood | 2.68e-09 | 15 |
haemolymphatic fluid | 2.68e-09 | 15 |
organism substance | 2.68e-09 | 15 |
regional part of nervous system | 8.90e-09 | 53 |
regional part of brain | 8.90e-09 | 53 |
skeletal element | 1.18e-08 | 90 |
regional part of forebrain | 7.39e-08 | 41 |
forebrain | 7.39e-08 | 41 |
anterior neural tube | 7.39e-08 | 41 |
future forebrain | 7.39e-08 | 41 |
telencephalon | 1.87e-07 | 34 |
brain grey matter | 2.26e-07 | 34 |
gray matter | 2.26e-07 | 34 |
skeletal system | 4.66e-07 | 100 |