FFCP PHASE1:Hg19::chr1:1711428..1711458,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65220 | |EntrezGene=65220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29831 | |HGNC=29831 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000492845_5end | |association_with_transcript=-27bp_to_ENST00000492845_5end | ||
|cluster_id=chr1:1711428..1711458,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_NADK_5end | |description=CAGE_peak_3_at_NADK_5end | ||
|id=chr1:1711428..1711458,- | |id=chr1:1711428..1711458,- | ||
|ontology_enrichment_celltype=CL:0000738!4.50e-45!140;CL:0000766!3.25e-44!76;CL:0002009!1.12e-41!65;CL:0002194!6.06e-41!63;CL:0000576!6.06e-41!63;CL:0000040!6.06e-41!63;CL:0000559!6.06e-41!63;CL:0000037!1.64e-40!172;CL:0000566!1.64e-40!172;CL:0000988!2.98e-38!182;CL:0000763!2.47e-37!112;CL:0000049!2.47e-37!112;CL:0002087!2.48e-37!119;CL:0002032!2.54e-37!165;CL:0000837!2.54e-37!165;CL:0000557!6.44e-37!71;CL:0000839!1.77e-36!70;CL:0002057!4.52e-36!42;CL:0002031!2.40e-34!124;CL:0000860!2.98e-32!45;CL:0002393!3.63e-09!9;CL:0002397!3.63e-09!9;CL:0000094!1.87e-08!8;CL:0000134!2.17e-08!358;CL:0002320!7.89e-08!365;CL:0000451!9.87e-08!10;CL:0000219!5.28e-07!390 | |ontology_enrichment_celltype=CL:0000738!4.50e-45!140;CL:0000766!3.25e-44!76;CL:0002009!1.12e-41!65;CL:0002194!6.06e-41!63;CL:0000576!6.06e-41!63;CL:0000040!6.06e-41!63;CL:0000559!6.06e-41!63;CL:0000037!1.64e-40!172;CL:0000566!1.64e-40!172;CL:0000988!2.98e-38!182;CL:0000763!2.47e-37!112;CL:0000049!2.47e-37!112;CL:0002087!2.48e-37!119;CL:0002032!2.54e-37!165;CL:0000837!2.54e-37!165;CL:0000557!6.44e-37!71;CL:0000839!1.77e-36!70;CL:0002057!4.52e-36!42;CL:0002031!2.40e-34!124;CL:0000860!2.98e-32!45;CL:0002393!3.63e-09!9;CL:0002397!3.63e-09!9;CL:0000094!1.87e-08!8;CL:0000134!2.17e-08!358;CL:0002320!7.89e-08!365;CL:0000451!9.87e-08!10;CL:0000219!5.28e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.45e-42;39!CL:0000234;3.45e-42;39!CL:0000860;1.08e-41;33!CL:0002057;1.08e-41;33!CL:0000576;3.13e-40;48!CL:0000766;6.48e-32;69!CL:0000763;6.44e-17;100!CL:0002087;4.12e-16;104!CL:0000738;7.43e-15;136!CL:0000094;5.33e-13;8!CL:0000235;3.66e-10;6!CL:0002393;6.46e-10;6!CL:0002397;6.46e-10;6!CL:0000081;6.82e-09;11!CL:0000451;1.57e-08;10!CL:0000988;2.06e-08;177!CL:0000219;7.17e-08;193!CL:0000990;8.06e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.95e-79,72;CL:0002194,8.64e-74,59;CL:0000576,8.64e-74,59;CL:0000040,8.64e-74,59;CL:0000559,8.64e-74,59;CL:0002009,9.77e-71,61;CL:0000473,3.91e-68,48;CL:0000234,3.91e-68,48;CL:0000738,1.84e-66,136;CL:0000839,6.58e-64,66;CL:0000557,1.15e-62,67;CL:0000860,4.78e-59,42;CL:0002057,4.78e-59,42;CL:0000763,1.24e-58,108;CL:0000049,1.24e-58,108;CL:0000037,8.24e-57,168;CL:0002087,3.42e-56,115;CL:0000988,1.90e-52,177;CL:0002032,1.71e-51,161;CL:0000837,1.71e-51,161;CL:0002031,1.08e-47,120;CL:0000134,2.17e-15,354;CL:0002320,1.41e-14,361;CL:0002393,3.50e-14,9;CL:0002397,3.50e-14,9;CL:0000094,5.27e-13,8;CL:0000219,9.13e-12,386;CL:0000235,3.62e-10,6;CL:0000048,2.84e-09,427;CL:0000034,4.93e-09,441;CL:0000081,6.77e-09,11;CL:0000723,8.32e-09,433;CL:0000451,1.88e-08,10;CL:0000990,8.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-42;42!CL:0000049;7.61e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.14e-46!102;UBERON:0003061!3.14e-46!102;UBERON:0002193!1.63e-41!112;UBERON:0002371!1.50e-33!80;UBERON:0001474!4.07e-30!86;UBERON:0004765!5.64e-26!101;UBERON:0001434!5.64e-26!101;UBERON:0002405!7.04e-26!115;UBERON:0007023!1.07e-16!115;UBERON:0003081!1.09e-12!216;UBERON:0000178!5.84e-12!15;UBERON:0000179!5.84e-12!15;UBERON:0000463!5.84e-12!15;UBERON:0002204!1.24e-08!167;UBERON:0002384!4.66e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-13;15!UBERON:0000179;1.63e-13;15!UBERON:0000463;1.63e-13;15!UBERON:0002390;5.13e-11;32!UBERON:0002193;4.19e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.62e-74,98;UBERON:0003061,4.62e-74,98;UBERON:0002193,7.09e-69,108;UBERON:0002371,6.39e-57,76;UBERON:0002405,2.78e-55,93;UBERON:0001474,2.70e-51,82;UBERON:0004765,5.72e-45,90;UBERON:0001434,1.68e-38,100;UBERON:0003081,2.17e-30,203;UBERON:0002204,7.57e-18,167;UBERON:0002384,5.01e-14,371;UBERON:0000926,1.05e-13,315;UBERON:0004120,1.05e-13,315;UBERON:0006603,1.05e-13,315;UBERON:0000178,1.67e-13,15;UBERON:0000179,1.67e-13,15;UBERON:0000463,1.67e-13,15 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0.136874425072884,0,3.36218985290986,1.64201178899891,2.12519109546934,35.7961491932503,23.0297638858328,23.6868668673596,0,0,0,0,0,1.46800219667424,46.5356143166777,45.7241340231923,38.4109241167058,43.8874329510252,48.5840499028469,42.2423930920066,43.6194716338694,37.4097184251921,33.7191845051064,79.7231596586498,35.360438369877,39.6424154745733,56.6754012874636,36.1186596206032,34.9993700235106,74.4650670391096,33.565203546359,56.8791243696235,60.8022756722613,34.1132687572307,35.5063105423234,76.2148892003547,46.8556379531097,53.0649814413204,45.5194794257668,30.1190123008664,33.6717552920828,79.517331384232,40.8517361777621,51.6942466666327,41.2047811021059,27.6385946762707,28.8861163457805,106.550312463473,60.029254665973,73.4192738862852,68.0242021924453,67.1829587889538,72.3322327003897,57.0629446224195,46.7050136737085,56.8968576907664,70.6831604478296,52.5140027805598,63.5671255100926,0,2.18455444504853,0.889509253863555,0.853460445133014,0.400395987036012,2.29900975981793,2.64417949113945,0,0.569212969109448,0,0,1.32171328579026,5.04457706683382,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0.950452044448374,4.36667845325541,1.66382594500744,3.74792179657038,5.44587679701239,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.37528029272598,0,0,6.16640047943898,6.44280028007289,13.5617119729242,3.33886874027479,2.85997455390064,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,237.204751384914,356.757843016459,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.901428353439581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0.72995471815166,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.4744862479165,47.5028658232653,51.7236444764774,0.93733833986777,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.4067439975381,59.768593880423,78.0085576087217,0,0,0,0,0,0,0,2.75843064282698,0,1.15508732651774,0,0,0,0.167516265334349,0,226.949128255996,197.446563074656,202.234770556785,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,23.3647869518863,33.219986926067,19.3176879624234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0.670302275535787,0,1.97701981631236,0,0,0,0,75.1022461663611,71.8758974713833,72.9148399582928,43.5964149087754,60.8816164167567,73.2774841647771,53.4631122865734,53.1393868117161,0,0,0,0,0,0,0,0,1.53204296105893,0,0.324621940274555,2.24637742490767,0,0.626719583092093,0,0,0,0.605399121573143,5.96184732766457,2.06103206853459,0.614481528616916,1.78940886313933,1.16794399198336,0.390776190804081,0,0,0,0,0,0,2.19762268907841,0,0.891547074219827,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,0.398495976502139,3.86797481743607,0,0.613612095012929,1.47701766553283,0,0,0.179021174675609,1.53471711068062,0.493217028184668,43.1069566224492,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,0,0,0,0.230850775511391,0.91153644677601,0,0,0,1.27600463892768,0.549585560411174,3.19820865611181,0,0.627921025580099,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.353830258013357,0.611030144933625,0.889563386041866,0.370691816839509,0.313265848516366,0.337005664903385,0,0,0.182454789215666,0,0,0,0,0.30607276163049,2.02197054811161,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.189932387867636,0,0.320635281006135,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0.229160424011684,0.717873024576814,0.399358000997982,2.57535628881943,0.446342914883745,0.470284307407084,0,0,0,0.164831716762333,0,0,0.423366660328922,0,0,0.321506296930038,0.275078873194468,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0.394028536495991,0.314727528809989,0,0.179287339332845,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0.129282956361551,0.26446520348538,0,0,4.37828391527548,0.157204305099666,4.97086866416635,6.94632430536731,0.395223263795889,0,0,0,0,0,0.327872630709804,0.628216385000937,0,0,0.250381861413,0,0.665574309221114,0.434674820589684,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0.159296767163702,0.899606224327209,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0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| ||
|short_description=p3@NADK | |short_description=p3@NADK | ||
}} | }} |
Latest revision as of 14:43, 18 September 2015
Short description: | p3@NADK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NADK_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -27bp_to_ENST00000492845_5end |
EntrezGene: | NADK |
HGNC: | 29831 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.62e-74 | 98 |
blood island | 4.62e-74 | 98 |
hemolymphoid system | 7.09e-69 | 108 |
bone marrow | 6.39e-57 | 76 |
immune system | 2.78e-55 | 93 |
bone element | 2.70e-51 | 82 |
skeletal element | 5.72e-45 | 90 |
skeletal system | 1.68e-38 | 100 |
lateral plate mesoderm | 2.17e-30 | 203 |
musculoskeletal system | 7.57e-18 | 167 |
connective tissue | 5.01e-14 | 371 |
mesoderm | 1.05e-13 | 315 |
mesoderm-derived structure | 1.05e-13 | 315 |
presumptive mesoderm | 1.05e-13 | 315 |
blood | 1.67e-13 | 15 |
haemolymphatic fluid | 1.67e-13 | 15 |
organism substance | 1.67e-13 | 15 |