FFCP PHASE1:Hg19::chr19:45754601..45754611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57787 | |EntrezGene=57787 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13538 | |HGNC=13538 | ||
|TSSclassifier=strong | |||
|UniProt=O75271 | |UniProt=O75271 | ||
|association_with_transcript=51bp_to_ENST00000262893_5end | |association_with_transcript=51bp_to_ENST00000262893_5end | ||
|cluster_id=chr19:45754601..45754611,+ | |||
|description=CAGE_peak_4_at_MARK4_5end | |description=CAGE_peak_4_at_MARK4_5end | ||
|id=chr19:45754601..45754611,+ | |id=chr19:45754601..45754611,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000746;2.56e-07;7!CL:1000612;2.56e-07;7!CL:0002262;5.26e-07;2!CL:1000398;5.26e-07;2!CL:0000650;8.52e-07;2!CL:1000500;8.52e-07;2!CL:1000618;8.52e-07;2!CL:1001318;8.52e-07;2!CL:0002549;8.52e-07;2!CL:0002173;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,2.95e-07,7;CL:1000612,2.95e-07,7;CL:0002262,5.41e-07,2;CL:1000398,5.41e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.46e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.46e-12;1!UBERON:0001785;2.46e-12;1!UBERON:0002464;2.46e-12;1!UBERON:0004904;2.46e-12;1!UBERON:0001021;2.46e-12;1!UBERON:0000074;2.56e-07;7!UBERON:0001229;2.56e-07;7!UBERON:0000353;2.59e-07;15!UBERON:0001281;5.26e-07;2!UBERON:0003497;5.26e-07;2!UBERON:0003909;5.26e-07;2!UBERON:0003835;5.26e-07;2!UBERON:0003714;8.52e-07;2!UBERON:0005162;8.52e-07;2!UBERON:0000122;8.52e-07;2!UBERON:0005629;8.52e-07;2!UBERON:0003567;8.52e-07;2!UBERON:0003838;8.52e-07;2!UBERON:0003586;8.52e-07;2!UBERON:0005358;8.52e-07;2!UBERON:0005169;8.52e-07;2!UBERON:0002321;8.52e-07;2!UBERON:0001886;8.52e-07;2!UBERON:0005215;8.52e-07;2!UBERON:0002303;8.52e-07;2!UBERON:0004086;8.52e-07;2!UBERON:0002319;8.52e-07;2!UBERON:0005282;8.52e-07;2!UBERON:0005281;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.20e-12,1;UBERON:0001785,2.20e-12,1;UBERON:0002464,2.20e-12,1;UBERON:0004904,2.20e-12,1;UBERON:0001021,2.20e-12,1;UBERON:0003902,2.20e-12,1;UBERON:0005425,2.20e-12,1;UBERON:0000353,2.89e-07,15;UBERON:0010532,2.95e-07,7;UBERON:0000074,2.95e-07,7;UBERON:0001229,2.95e-07,7;UBERON:0001230,2.95e-07,7;UBERON:0003220,2.95e-07,7;UBERON:0005749,2.95e-07,7;UBERON:0004199,2.95e-07,7;UBERON:0004209,2.95e-07,7;UBERON:0004198,2.95e-07,7;UBERON:0001281,5.41e-07,2;UBERON:0003497,5.41e-07,2;UBERON:0003909,5.41e-07,2;UBERON:0003835,5.41e-07,2;UBERON:0003714,8.06e-07,2;UBERON:0005162,8.06e-07,2;UBERON:0000122,8.06e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,1.26343974685366,0.261185628199839,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0.151357427644931,1.15235184896,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.103325781175765,2.37600571456411,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0.45071417671979,0.113432183160021,0,0,0.423863802319124,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,0.193260853163297,0,0,0.487894824518382,0.132529768321485,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0.12624243342638,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,7.15312891703765,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.899756920638513,0,0.502257091432126,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0.508189248444927,0,1.54657762555539,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0,0,0.902838299183157,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0.215714200818617,0.213455115606889,0,0,0.604780586659361,0.248107807818777,0,0.561320188866147,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0.483437798366489,1.00253235151642,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,2.27466768141793,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.576570202095319,0,0.50578890427775,0,0,0,0,0,1.73986598415015,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0,0,0.731140468893853,0,0.272999822815972,0.707027159768564,0,0,0,0.876901770507525,0.578775534266688,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0.284567373393656,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0.333926115068718,0,0,0,0.552567831062295,0,0.20453736500431,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0.269272933229316,0,0,0.274792780205587,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0.702793337176017,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0.0821154570532092,0.193978032976839,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0,0.717873024576814,0,0,0.223171457441873,0.470284307407084,0,0,0.157566364614447,0.164831716762333,0.26961417541674,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.739202355635845,0.35857467866569,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0.427149650270779,0,0.828478110694391,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0.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| ||
|short_description=p4@MARK4 | |short_description=p4@MARK4 | ||
}} | }} |
Latest revision as of 16:07, 18 September 2015
Short description: | p4@MARK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MARK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_ENST00000262893_5end |
EntrezGene: | MARK4 |
HGNC: | 13538 |
UniProt: | O75271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 2.95e-07 | 7 |
kidney corpuscule cell | 2.95e-07 | 7 |
endothelial cell of sinusoid | 5.41e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.20e-12 | 1 |
cranial nerve | 2.20e-12 | 1 |
nerve trunk | 2.20e-12 | 1 |
nerve connecting eye with brain | 2.20e-12 | 1 |
nerve | 2.20e-12 | 1 |
retinal neural layer | 2.20e-12 | 1 |
presumptive neural retina | 2.20e-12 | 1 |
parenchyma | 2.89e-07 | 15 |
primitive nephron | 2.95e-07 | 7 |
renal glomerulus | 2.95e-07 | 7 |
renal corpuscle | 2.95e-07 | 7 |
glomerular capsule | 2.95e-07 | 7 |
metanephric mesenchyme | 2.95e-07 | 7 |
glomerular tuft | 2.95e-07 | 7 |
S-shaped body | 2.95e-07 | 7 |
renal vesicle | 2.95e-07 | 7 |
comma-shaped body | 2.95e-07 | 7 |
hepatic sinusoid | 5.41e-07 | 2 |
abdomen blood vessel | 5.41e-07 | 2 |
sinusoid | 5.41e-07 | 2 |
abdominal segment blood vessel | 5.41e-07 | 2 |
neural tissue | 8.06e-07 | 2 |
multi cell component structure | 8.06e-07 | 2 |
neuron projection bundle | 8.06e-07 | 2 |