FFCP PHASE1:Hg19::chr3:5020939..5020952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8553 | |EntrezGene=8553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1046 | |HGNC=1046 | ||
|TSSclassifier=strong | |||
|UniProt=O14503 | |UniProt=O14503 | ||
|association_with_transcript=138bp_to_ENST00000256495_5end | |association_with_transcript=138bp_to_ENST00000256495_5end | ||
|cluster_id=chr3:5020939..5020952,+ | |||
|coexpression_cluster_id=C473 | |coexpression_cluster_id=C473 | ||
|description=CAGE_peak_2_at_BHLHE40_5end | |description=CAGE_peak_2_at_BHLHE40_5end | ||
|id=chr3:5020939..5020952,+ | |id=chr3:5020939..5020952,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.19e-25!140;CL:0000037!6.25e-22!172;CL:0000566!6.25e-22!172;CL:0000988!6.69e-21!182;CL:0002032!8.25e-20!165;CL:0000837!8.25e-20!165;CL:0000860!1.41e-18!45;CL:0002057!2.81e-18!42;CL:0002087!3.74e-17!119;CL:0002031!6.28e-17!124;CL:0000766!1.21e-13!76;CL:0000763!7.71e-12!112;CL:0000049!7.71e-12!112;CL:0000557!1.05e-10!71;CL:0002009!4.01e-09!65;CL:0000839!6.46e-09!70;CL:0002194!2.25e-08!63;CL:0000576!2.25e-08!63;CL:0000040!2.25e-08!63;CL:0000559!2.25e-08!63;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000838!6.70e-08!52;CL:0000791!2.49e-07!18;CL:0000789!2.49e-07!18;CL:0002420!2.49e-07!18;CL:0002419!2.49e-07!18;CL:0000790!2.49e-07!18 | |ontology_enrichment_celltype=CL:0000738!2.19e-25!140;CL:0000037!6.25e-22!172;CL:0000566!6.25e-22!172;CL:0000988!6.69e-21!182;CL:0002032!8.25e-20!165;CL:0000837!8.25e-20!165;CL:0000860!1.41e-18!45;CL:0002057!2.81e-18!42;CL:0002087!3.74e-17!119;CL:0002031!6.28e-17!124;CL:0000766!1.21e-13!76;CL:0000763!7.71e-12!112;CL:0000049!7.71e-12!112;CL:0000557!1.05e-10!71;CL:0002009!4.01e-09!65;CL:0000839!6.46e-09!70;CL:0002194!2.25e-08!63;CL:0000576!2.25e-08!63;CL:0000040!2.25e-08!63;CL:0000559!2.25e-08!63;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000838!6.70e-08!52;CL:0000791!2.49e-07!18;CL:0000789!2.49e-07!18;CL:0002420!2.49e-07!18;CL:0002419!2.49e-07!18;CL:0000790!2.49e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-17;33!CL:0002057;1.99e-17;33!CL:0000473;1.06e-10;39!CL:0000234;1.06e-10;39!CL:0000576;7.18e-09;48!CL:0002087;6.51e-08;104!CL:0000766;7.72e-08;69!CL:0000791;3.35e-07;18!CL:0000789;3.35e-07;18!CL:0002419;3.35e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.25e-26,136;CL:0000037,3.64e-22,168;CL:0000988,3.49e-21,177;CL:0002032,5.55e-20,161;CL:0000837,5.55e-20,161;CL:0000860,2.95e-18,42;CL:0002057,2.95e-18,42;CL:0002087,1.66e-17,115;CL:0002031,2.94e-17,120;CL:0000766,3.30e-14,72;CL:0000473,9.10e-14,48;CL:0000234,9.10e-14,48;CL:0000763,5.27e-12,108;CL:0000049,5.27e-12,108;CL:0000557,4.08e-11,67;CL:0002009,1.81e-09,61;CL:0000839,3.20e-09,66;CL:0002194,1.11e-08,59;CL:0000576,1.11e-08,59;CL:0000040,1.11e-08,59;CL:0000559,1.11e-08,59;CL:0000542,3.69e-08,53;CL:0000051,3.69e-08,53;CL:0000838,6.77e-08,52;CL:0000791,3.28e-07,18;CL:0000789,3.28e-07,18;CL:0002420,3.28e-07,18;CL:0002419,3.28e-07,18;CL:0000790,3.28e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.15e-14;42!CL:0000790;3.35e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.98e-18!115;UBERON:0001049!1.87e-13!57;UBERON:0005068!1.87e-13!57;UBERON:0006241!1.87e-13!57;UBERON:0007135!1.87e-13!57;UBERON:0002616!1.22e-12!59;UBERON:0002780!5.16e-12!41;UBERON:0001890!5.16e-12!41;UBERON:0006240!5.16e-12!41;UBERON:0003080!1.22e-11!42;UBERON:0002390!1.74e-11!102;UBERON:0003061!1.74e-11!102;UBERON:0000955!2.06e-11!69;UBERON:0006238!2.06e-11!69;UBERON:0003075!1.90e-10!86;UBERON:0007284!1.90e-10!86;UBERON:0005743!5.04e-10!86;UBERON:0001017!6.80e-10!82;UBERON:0001893!9.92e-10!34;UBERON:0002193!1.02e-09!112;UBERON:0001869!1.04e-09!32;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0002791!2.58e-09!33;UBERON:0003056!1.22e-08!61;UBERON:0002346!1.28e-08!90;UBERON:0002619!6.51e-08!22;UBERON:0000956!8.20e-08!25;UBERON:0000203!8.20e-08!25;UBERON:0002371!8.62e-08!80;UBERON:0000073!2.70e-07!94;UBERON:0001016!2.70e-07!94;UBERON:0001950!3.26e-07!20;UBERON:0001474!3.56e-07!86;UBERON:0002405!5.36e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!5.98e-18!115;UBERON:0001049!1.87e-13!57;UBERON:0005068!1.87e-13!57;UBERON:0006241!1.87e-13!57;UBERON:0007135!1.87e-13!57;UBERON:0002616!1.22e-12!59;UBERON:0002780!5.16e-12!41;UBERON:0001890!5.16e-12!41;UBERON:0006240!5.16e-12!41;UBERON:0003080!1.22e-11!42;UBERON:0002390!1.74e-11!102;UBERON:0003061!1.74e-11!102;UBERON:0000955!2.06e-11!69;UBERON:0006238!2.06e-11!69;UBERON:0003075!1.90e-10!86;UBERON:0007284!1.90e-10!86;UBERON:0005743!5.04e-10!86;UBERON:0001017!6.80e-10!82;UBERON:0001893!9.92e-10!34;UBERON:0002193!1.02e-09!112;UBERON:0001869!1.04e-09!32;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0002791!2.58e-09!33;UBERON:0003056!1.22e-08!61;UBERON:0002346!1.28e-08!90;UBERON:0002619!6.51e-08!22;UBERON:0000956!8.20e-08!25;UBERON:0000203!8.20e-08!25;UBERON:0002371!8.62e-08!80;UBERON:0000073!2.70e-07!94;UBERON:0001016!2.70e-07!94;UBERON:0001950!3.26e-07!20;UBERON:0001474!3.56e-07!86;UBERON:0002405!5.36e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.30e-09;32!UBERON:0001893;1.57e-09;34!UBERON:0002780;2.15e-09;41!UBERON:0001890;2.15e-09;41!UBERON:0002791;3.73e-09;32!UBERON:0003528;4.67e-09;34!UBERON:0002020;4.67e-09;34!UBERON:0000956;1.53e-08;25!UBERON:0000203;1.53e-08;25!UBERON:0002619;1.76e-08;22!UBERON:0000073;2.07e-08;53!UBERON:0002616;2.07e-08;53!UBERON:0001950;9.80e-08;20 | |||
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| ||
|short_description=p2@BHLHE40 | |short_description=p2@BHLHE40 | ||
}} | }} |
Latest revision as of 18:25, 18 September 2015
Short description: | p2@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BHLHE40_5end |
Coexpression cluster: | C473_immature_Eosinophils_cord_CD14_CD4_CD8_Natural |
Association with transcript: | 138bp_to_ENST00000256495_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | O14503 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.83e-18 | 114 |
neural tube | 3.44e-14 | 56 |
neural rod | 3.44e-14 | 56 |
future spinal cord | 3.44e-14 | 56 |
neural keel | 3.44e-14 | 56 |
regional part of nervous system | 4.89e-14 | 53 |
regional part of brain | 4.89e-14 | 53 |
regional part of forebrain | 2.23e-12 | 41 |
forebrain | 2.23e-12 | 41 |
anterior neural tube | 2.23e-12 | 41 |
future forebrain | 2.23e-12 | 41 |
hematopoietic system | 6.81e-12 | 98 |
blood island | 6.81e-12 | 98 |
brain | 9.40e-12 | 68 |
future brain | 9.40e-12 | 68 |
neural plate | 2.98e-10 | 82 |
presumptive neural plate | 2.98e-10 | 82 |
central nervous system | 4.10e-10 | 81 |
telencephalon | 4.95e-10 | 34 |
cerebral hemisphere | 5.14e-10 | 32 |
brain grey matter | 5.36e-10 | 34 |
gray matter | 5.36e-10 | 34 |
hemolymphoid system | 5.89e-10 | 108 |
regional part of telencephalon | 1.37e-09 | 32 |
neurectoderm | 1.14e-08 | 86 |
pre-chordal neural plate | 1.98e-08 | 61 |
bone marrow | 3.38e-08 | 76 |
regional part of cerebral cortex | 3.55e-08 | 22 |
cerebral cortex | 4.57e-08 | 25 |
pallium | 4.57e-08 | 25 |
bone element | 1.07e-07 | 82 |
neocortex | 1.86e-07 | 20 |
nervous system | 1.88e-07 | 89 |
immune system | 3.19e-07 | 93 |