FFCP PHASE1:Hg19::chr12:52306196..52306215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94 | |EntrezGene=94 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |HGNC=175 | ||
|TSSclassifier=strong | |||
|UniProt=E7EN07 | |UniProt=E7EN07 | ||
|association_with_transcript=41bp_to_ENST00000419526,ENST00000548659_5end | |association_with_transcript=41bp_to_ENST00000419526,ENST00000548659_5end | ||
|cluster_id=chr12:52306196..52306215,+ | |||
|coexpression_cluster_id=C3289 | |||
|description=CAGE_peak_6_at_ACVRL1_5end | |description=CAGE_peak_6_at_ACVRL1_5end | ||
|id=chr12:52306196..52306215,+ | |id=chr12:52306196..52306215,+ | ||
|ontology_enrichment_celltype=CL:0000115!2.98e-31!35;CL:0002139!3.03e-30!24;CL:0000071!3.65e-25!18;CL:0002546!3.65e-25!18;CL:0002078!1.36e-22!44;CL:0000213!4.53e-15!57;CL:0000215!4.53e-15!57;CL:1000413!2.26e-13!9;CL:0002543!1.54e-09!6;CL:0002544!2.08e-09!6;CL:1000612!8.30e-08!7;CL:1000746!8.30e-08!7;CL:0000666!6.34e-07!4;CL:0002188!6.34e-07!4;CL:0005020!8.40e-07!6;CL:0002138!8.40e-07!6;CL:0005022!8.40e-07!6 | |ontology_enrichment_celltype=CL:0000115!2.98e-31!35;CL:0002139!3.03e-30!24;CL:0000071!3.65e-25!18;CL:0002546!3.65e-25!18;CL:0002078!1.36e-22!44;CL:0000213!4.53e-15!57;CL:0000215!4.53e-15!57;CL:1000413!2.26e-13!9;CL:0002543!1.54e-09!6;CL:0002544!2.08e-09!6;CL:1000612!8.30e-08!7;CL:1000746!8.30e-08!7;CL:0000666!6.34e-07!4;CL:0002188!6.34e-07!4;CL:0005020!8.40e-07!6;CL:0002138!8.40e-07!6;CL:0005022!8.40e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.47e-69;36!CL:0002139;1.10e-62;24!CL:0000071;4.14e-49;18!CL:0002078;1.79e-38;45!CL:0000213;3.32e-31;58!CL:0000215;3.32e-31;58!CL:0002188;3.16e-27;5!CL:0002543;2.01e-22;6!CL:1000413;6.27e-22;9!CL:1000746;2.08e-19;7!CL:1000612;2.08e-19;7!CL:0002544;5.02e-15;6!CL:0002138;5.11e-15;6!CL:0002262;8.57e-12;2!CL:1000398;8.57e-12;2!CL:0002681;3.09e-11;12!CL:0002584;3.09e-11;12!CL:1000449;6.13e-09;15!CL:0000076;1.79e-08;63!CL:0002144;1.79e-08;3!CL:0002618;5.84e-08;3!CL:1000497;7.41e-08;17!CL:0002518;7.41e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.30e-83,36;CL:0002078,2.55e-65,45;CL:0002139,5.27e-63,24;CL:0000213,1.59e-49,58;CL:0000215,1.59e-49,58;CL:0000071,2.86e-49,18;CL:0002546,2.86e-49,18;CL:0002188,3.95e-27,5;CL:0000222,5.05e-23,121;CL:0002543,1.44e-22,6;CL:1000413,5.54e-22,9;CL:1000746,2.44e-19,7;CL:1000612,2.44e-19,7;CL:0005020,3.63e-15,6;CL:0002138,3.63e-15,6;CL:0005022,3.63e-15,6;CL:0002544,4.35e-15,6;CL:0000076,3.73e-12,63;CL:0002262,7.69e-12,2;CL:1000398,7.69e-12,2;CL:0002681,3.38e-11,12;CL:0002584,3.38e-11,12;CL:1000449,6.57e-09,15;CL:0002144,1.90e-08,3;CL:0002321,2.74e-08,250;CL:0002618,5.64e-08,3;CL:1000497,7.87e-08,17;CL:0002518,7.87e-08,17;CL:0000066,2.17e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;4.14e-49;18!CL:0005022;5.11e-15;6!CL:0000222;7.40e-10;121!UBERON:0003056;5.84e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-52!115;UBERON:0004111!8.66e-28!241;UBERON:0000025!3.39e-27!194;UBERON:0000477!5.53e-26!286;UBERON:0001986!3.65e-25!18;UBERON:0004638!3.65e-25!18;UBERON:0004852!3.65e-25!18;UBERON:0001049!1.38e-22!57;UBERON:0005068!1.38e-22!57;UBERON:0006241!1.38e-22!57;UBERON:0007135!1.38e-22!57;UBERON:0000487!2.00e-21!22;UBERON:0001017!1.41e-19!82;UBERON:0005743!2.95e-19!86;UBERON:0002616!1.16e-18!59;UBERON:0000073!3.52e-18!94;UBERON:0001016!3.52e-18!94;UBERON:0000955!3.69e-18!69;UBERON:0006238!3.69e-18!69;UBERON:0006914!4.97e-18!25;UBERON:0002020!8.67e-18!34;UBERON:0003528!8.67e-18!34;UBERON:0002780!1.67e-17!41;UBERON:0001890!1.67e-17!41;UBERON:0006240!1.67e-17!41;UBERON:0001893!1.71e-17!34;UBERON:0003075!4.45e-17!86;UBERON:0007284!4.45e-17!86;UBERON:0003080!6.93e-17!42;UBERON:0002791!1.23e-16!33;UBERON:0001869!4.04e-16!32;UBERON:0000119!6.67e-16!312;UBERON:0002346!9.83e-16!90;UBERON:0002619!1.91e-15!22;UBERON:0000483!3.30e-15!309;UBERON:0001950!1.46e-13!20;UBERON:0003915!2.26e-13!9;UBERON:0004700!2.26e-13!9;UBERON:0001917!2.26e-13!9;UBERON:0000055!2.28e-13!69;UBERON:0000956!5.32e-13!25;UBERON:0000203!5.32e-13!25;UBERON:0002049!3.90e-11!79;UBERON:0007798!3.90e-11!79;UBERON:0000153!2.10e-10!129;UBERON:0007811!2.10e-10!129;UBERON:0003056!4.02e-10!61;UBERON:0000468!6.68e-10!659;UBERON:0004872!7.47e-10!84;UBERON:0000467!7.86e-10!625;UBERON:0003914!8.14e-10!118;UBERON:0000480!9.36e-10!626;UBERON:0001981!1.15e-09!60;UBERON:0007500!1.15e-09!60;UBERON:0004537!1.15e-09!60;UBERON:0006965!1.15e-09!60;UBERON:0000033!5.13e-09!123;UBERON:0001009!7.06e-09!113;UBERON:0002465!1.60e-08!10;UBERON:0004535!3.91e-08!110;UBERON:0001638!7.74e-08!9;UBERON:0003920!7.74e-08!9;UBERON:0004582!7.74e-08!9;UBERON:0000074!8.30e-08!7;UBERON:0001229!8.30e-08!7;UBERON:0001230!8.30e-08!7;UBERON:0005749!8.30e-08!7;UBERON:0004199!8.30e-08!7;UBERON:0004209!8.30e-08!7;UBERON:0004198!8.30e-08!7;UBERON:0000922!1.48e-07!612;UBERON:0000200!1.71e-07!6;UBERON:0002298!1.74e-07!8;UBERON:0004121!2.23e-07!169;UBERON:0001871!2.29e-07!7;UBERON:0000064!2.32e-07!219;UBERON:0003076!6.29e-07!15;UBERON:0003057!6.29e-07!15;UBERON:0000924!6.36e-07!173;UBERON:0006601!6.36e-07!173;UBERON:0000349!7.22e-07!5;UBERON:0001473!7.82e-07!8;UBERON:0004536!7.82e-07!8;UBERON:0006558!7.82e-07!8;UBERON:0002050!8.32e-07!605;UBERON:0005423!8.32e-07!605 | |||
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|short_description=p6@ACVRL1 | |short_description=p6@ACVRL1 | ||
}} | }} |
Latest revision as of 20:46, 18 September 2015
Short description: | p6@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ACVRL1_5end |
Coexpression cluster: | C3289_lung_Endothelial_Renal_Hepatic_Lymphatic_adipose_breast |
Association with transcript: | 41bp_to_ENST00000419526, ENST00000548659_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | E7EN07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.30e-83 | 36 |
meso-epithelial cell | 2.55e-65 | 45 |
endothelial cell of vascular tree | 5.27e-63 | 24 |
lining cell | 1.59e-49 | 58 |
barrier cell | 1.59e-49 | 58 |
blood vessel endothelial cell | 2.86e-49 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.86e-49 | 18 |
glomerular endothelial cell | 3.95e-27 | 5 |
mesodermal cell | 5.05e-23 | 121 |
vein endothelial cell | 1.44e-22 | 6 |
endothelial cell of artery | 5.54e-22 | 9 |
glomerular cell | 2.44e-19 | 7 |
kidney corpuscule cell | 2.44e-19 | 7 |
lymphangioblast | 3.63e-15 | 6 |
endothelial cell of lymphatic vessel | 3.63e-15 | 6 |
vascular lymphangioblast | 3.63e-15 | 6 |
aortic endothelial cell | 4.35e-15 | 6 |
squamous epithelial cell | 3.73e-12 | 63 |
endothelial cell of sinusoid | 7.69e-12 | 2 |
endothelial cell of hepatic sinusoid | 7.69e-12 | 2 |
kidney cortical cell | 3.38e-11 | 12 |
renal cortical epithelial cell | 3.38e-11 | 12 |
epithelial cell of nephron | 6.57e-09 | 15 |
capillary endothelial cell | 1.90e-08 | 3 |
embryonic cell | 2.74e-08 | 250 |
endothelial cell of umbilical vein | 5.64e-08 | 3 |
kidney cell | 7.87e-08 | 17 |
kidney epithelial cell | 7.87e-08 | 17 |
epithelial cell | 2.17e-07 | 253 |