FFCP PHASE1:Hg19::chr5:78908317..78908341,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:78908317..78908341,+ to FFCP PHASE1:Hg19::chr5:78908317..78908341,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=167153 | |EntrezGene=167153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26776 | |HGNC=26776 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000515807_5end | |||
|cluster_id=chr5:78908317..78908341,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_PAPD4_5end | |||
|id=chr5:78908317..78908341,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.74e-56!172;CL:0000566!1.74e-56!172;CL:0000738!3.42e-54!140;CL:0002032!7.12e-53!165;CL:0000837!7.12e-53!165;CL:0000988!1.61e-50!182;CL:0002087!1.00e-43!119;CL:0002031!1.33e-43!124;CL:0000763!5.81e-39!112;CL:0000049!5.81e-39!112;CL:0000766!5.60e-37!76;CL:0000557!6.85e-33!71;CL:0002009!9.92e-32!65;CL:0002194!9.28e-31!63;CL:0000576!9.28e-31!63;CL:0000040!9.28e-31!63;CL:0000559!9.28e-31!63;CL:0000839!5.14e-30!70;CL:0002057!1.01e-26!42;CL:0000860!9.67e-26!45;CL:0000134!1.35e-18!358;CL:0002320!1.71e-17!365;CL:0000219!2.10e-14!390;CL:0000838!1.66e-12!52;CL:0000542!4.54e-12!53;CL:0000051!4.54e-12!53;CL:0000048!5.02e-10!430;CL:0000034!2.08e-09!444;CL:0000723!2.22e-09!436;CL:0000945!4.85e-08!24;CL:0000826!4.85e-08!24;CL:0000236!2.91e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-21;33!CL:0002057;2.05e-21;33!CL:0000473;1.48e-20;39!CL:0000234;1.48e-20;39!CL:0000576;3.78e-20;48!CL:0000766;2.07e-17;69!CL:0002087;6.40e-14;104!CL:0000738;3.07e-13;136!CL:0000763;6.16e-13;100!CL:0000988;2.86e-10;177!CL:0000945;3.89e-08;24!CL:0000542;4.46e-08;53!CL:0000236;3.11e-07;13!CL:0000791;5.49e-07;18!CL:0000789;5.49e-07;18!CL:0002419;5.49e-07;18!CL:0000219;9.54e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.08e-59,168;CL:0000738,5.35e-57,136;CL:0002032,1.08e-55,161;CL:0000837,1.08e-55,161;CL:0000988,4.63e-54,177;CL:0002087,2.91e-46,115;CL:0002031,3.10e-46,120;CL:0000763,1.12e-41,108;CL:0000049,1.12e-41,108;CL:0000766,6.03e-40,72;CL:0000557,1.12e-35,67;CL:0002009,1.30e-34,61;CL:0002194,1.26e-33,59;CL:0000576,1.26e-33,59;CL:0000040,1.26e-33,59;CL:0000559,1.26e-33,59;CL:0000839,8.87e-33,66;CL:0000473,2.14e-30,48;CL:0000234,2.14e-30,48;CL:0000860,2.80e-27,42;CL:0002057,2.80e-27,42;CL:0000134,1.94e-19,354;CL:0002320,3.78e-18,361;CL:0000219,3.50e-15,386;CL:0000838,9.52e-13,52;CL:0000542,2.67e-12,53;CL:0000051,2.67e-12,53;CL:0000048,1.69e-10,427;CL:0000723,7.23e-10,433;CL:0000034,8.05e-10,441;CL:0000945,3.49e-08,24;CL:0000826,3.49e-08,24;CL:0000236,2.18e-07,14;CL:0000791,8.45e-07,18;CL:0000789,8.45e-07,18;CL:0002420,8.45e-07,18;CL:0002419,8.45e-07,18;CL:0000790,8.45e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-20;42!CL:0000049;5.87e-12;108!CL:0000051;4.46e-08;53!CL:0000790;5.49e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.00e-34!102;UBERON:0003061!3.00e-34!102;UBERON:0002193!1.81e-31!112;UBERON:0002371!9.10e-29!80;UBERON:0001474!2.02e-25!86;UBERON:0004765!7.89e-22!101;UBERON:0001434!7.89e-22!101;UBERON:0002405!3.34e-19!115;UBERON:0002384!4.35e-16!375;UBERON:0002204!1.98e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.72e-37,98;UBERON:0003061,9.72e-37,98;UBERON:0002193,7.23e-34,108;UBERON:0002371,2.83e-31,76;UBERON:0002405,2.11e-29,93;UBERON:0001474,1.32e-27,82;UBERON:0004765,5.71e-24,90;UBERON:0001434,5.64e-22,100;UBERON:0002384,1.11e-16,371;UBERON:0003081,4.46e-08,203;UBERON:0002204,2.80e-07,167 | |||
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| ||
|short_description=p3@PAPD4 | |||
}} | }} |
Latest revision as of 21:34, 18 September 2015
Short description: | p3@PAPD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAPD4_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000515807_5end |
EntrezGene: | PAPD4 |
HGNC: | 26776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.72e-37 | 98 |
blood island | 9.72e-37 | 98 |
hemolymphoid system | 7.23e-34 | 108 |
bone marrow | 2.83e-31 | 76 |
immune system | 2.11e-29 | 93 |
bone element | 1.32e-27 | 82 |
skeletal element | 5.71e-24 | 90 |
skeletal system | 5.64e-22 | 100 |
connective tissue | 1.11e-16 | 371 |
lateral plate mesoderm | 4.46e-08 | 203 |
musculoskeletal system | 2.80e-07 | 167 |