FFCP PHASE1:Hg19::chr19:47823271..47823283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728 | |EntrezGene=728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1338 | |HGNC=1338 | ||
|TSSclassifier=strong | |||
|UniProt=P21730 | |UniProt=P21730 | ||
|association_with_transcript=232bp_to_BT007358,CU679211,DQ891757,DQ894940,X57250_5end | |association_with_transcript=232bp_to_BT007358,CU679211,DQ891757,DQ894940,X57250_5end | ||
|cluster_id=chr19:47823271..47823283,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_C5AR1_5end | |description=CAGE_peak_5_at_C5AR1_5end | ||
|id=chr19:47823271..47823283,+ | |id=chr19:47823271..47823283,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.90e-89!76;CL:0002057!3.36e-77!42;CL:0000860!3.15e-71!45;CL:0000839!4.68e-70!70;CL:0002194!1.21e-69!63;CL:0000576!1.21e-69!63;CL:0000040!1.21e-69!63;CL:0000559!1.21e-69!63;CL:0000557!7.11e-69!71;CL:0002009!4.24e-67!65;CL:0000763!1.25e-55!112;CL:0000049!1.25e-55!112;CL:0000738!3.24e-50!140;CL:0002087!7.50e-39!119;CL:0000037!1.02e-37!172;CL:0000566!1.02e-37!172;CL:0002031!1.32e-36!124;CL:0002032!2.04e-35!165;CL:0000837!2.04e-35!165;CL:0000988!1.03e-34!182;CL:0000094!1.65e-18!8;CL:0000081!5.30e-13!11;CL:0000134!4.32e-12!358;CL:0002320!1.52e-11!365;CL:0000219!1.24e-09!390;CL:0000775!1.75e-08!3;CL:0002393!9.96e-08!9;CL:0002397!9.96e-08!9;CL:0000048!2.14e-07!430;CL:0002619!3.18e-07!3;CL:0000767!3.25e-07!3;CL:0000842!3.39e-07!3;CL:0000723!4.40e-07!436 | |ontology_enrichment_celltype=CL:0000766!1.90e-89!76;CL:0002057!3.36e-77!42;CL:0000860!3.15e-71!45;CL:0000839!4.68e-70!70;CL:0002194!1.21e-69!63;CL:0000576!1.21e-69!63;CL:0000040!1.21e-69!63;CL:0000559!1.21e-69!63;CL:0000557!7.11e-69!71;CL:0002009!4.24e-67!65;CL:0000763!1.25e-55!112;CL:0000049!1.25e-55!112;CL:0000738!3.24e-50!140;CL:0002087!7.50e-39!119;CL:0000037!1.02e-37!172;CL:0000566!1.02e-37!172;CL:0002031!1.32e-36!124;CL:0002032!2.04e-35!165;CL:0000837!2.04e-35!165;CL:0000988!1.03e-34!182;CL:0000094!1.65e-18!8;CL:0000081!5.30e-13!11;CL:0000134!4.32e-12!358;CL:0002320!1.52e-11!365;CL:0000219!1.24e-09!390;CL:0000775!1.75e-08!3;CL:0002393!9.96e-08!9;CL:0002397!9.96e-08!9;CL:0000048!2.14e-07!430;CL:0002619!3.18e-07!3;CL:0000767!3.25e-07!3;CL:0000842!3.39e-07!3;CL:0000723!4.40e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-102;33!CL:0002057;3.98e-102;33!CL:0000473;2.46e-86;39!CL:0000234;2.46e-86;39!CL:0000576;6.30e-49;48!CL:0000766;7.74e-36;69!CL:0000763;1.60e-20;100!CL:0000775;1.92e-18;3!CL:0000094;2.36e-18;8!CL:0000081;2.72e-13;11!CL:0000771;8.48e-13;2!CL:0000738;1.76e-12;136!CL:0002087;9.80e-12;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.18e-88,48;CL:0000234,3.18e-88,48;CL:0000860,1.52e-87,42;CL:0002057,1.52e-87,42;CL:0000766,3.19e-80,72;CL:0002194,1.67e-69,59;CL:0000576,1.67e-69,59;CL:0000040,1.67e-69,59;CL:0000559,1.67e-69,59;CL:0002009,4.35e-67,61;CL:0000839,1.12e-61,66;CL:0000557,1.09e-60,67;CL:0000763,7.96e-52,108;CL:0000049,7.96e-52,108;CL:0000738,4.87e-40,136;CL:0002087,2.62e-33,115;CL:0002032,5.98e-33,161;CL:0000837,5.98e-33,161;CL:0002031,1.06e-31,120;CL:0000037,2.44e-31,168;CL:0000988,1.87e-29,177;CL:0000775,1.76e-18,3;CL:0000094,1.94e-18,8;CL:0000081,2.37e-13,11;CL:0000771,6.70e-13,2;CL:0000134,1.00e-11,354;CL:0002320,2.23e-11,361;CL:0000219,3.75e-10,386;CL:0000048,1.19e-08,427;CL:0000723,1.92e-08,433;CL:0000034,3.57e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.61e-66;42!CL:0000049;3.29e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.23e-68!102;UBERON:0003061!1.23e-68!102;UBERON:0002193!1.99e-63!112;UBERON:0002371!4.58e-62!80;UBERON:0001474!9.61e-57!86;UBERON:0002405!4.79e-48!115;UBERON:0004765!3.41e-46!101;UBERON:0001434!3.41e-46!101;UBERON:0003081!4.74e-27!216;UBERON:0002204!2.48e-22!167;UBERON:0002384!2.05e-11!375;UBERON:0000926!1.36e-09!448;UBERON:0004120!1.36e-09!448;UBERON:0006603!1.36e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.82e-53,76;UBERON:0001474,9.74e-49,82;UBERON:0002390,2.03e-46,98;UBERON:0003061,2.03e-46,98;UBERON:0004765,5.68e-44,90;UBERON:0002405,2.15e-42,93;UBERON:0002193,1.22e-41,108;UBERON:0001434,4.49e-39,100;UBERON:0002204,2.84e-21,167;UBERON:0003081,1.46e-19,203;UBERON:0002384,6.66e-11,371;UBERON:0000926,1.54e-10,315;UBERON:0004120,1.54e-10,315;UBERON:0006603,1.54e-10,315 | |||
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| ||
|short_description=p5@C5AR1 | |short_description=p5@C5AR1 | ||
}} | }} |
Latest revision as of 23:23, 18 September 2015
Short description: | p5@C5AR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C5AR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 232bp_to_BT007358, CU679211, DQ891757, DQ894940, X57250_5end |
EntrezGene: | C5AR1 |
HGNC: | 1338 |
UniProt: | P21730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.18e-88 | 48 |
phagocyte | 3.18e-88 | 48 |
classical monocyte | 1.52e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-87 | 42 |
myeloid leukocyte | 3.19e-80 | 72 |
monopoietic cell | 1.67e-69 | 59 |
monocyte | 1.67e-69 | 59 |
monoblast | 1.67e-69 | 59 |
promonocyte | 1.67e-69 | 59 |
macrophage dendritic cell progenitor | 4.35e-67 | 61 |
myeloid lineage restricted progenitor cell | 1.12e-61 | 66 |
granulocyte monocyte progenitor cell | 1.09e-60 | 67 |
myeloid cell | 7.96e-52 | 108 |
common myeloid progenitor | 7.96e-52 | 108 |
leukocyte | 4.87e-40 | 136 |
nongranular leukocyte | 2.62e-33 | 115 |
hematopoietic oligopotent progenitor cell | 5.98e-33 | 161 |
hematopoietic multipotent progenitor cell | 5.98e-33 | 161 |
hematopoietic lineage restricted progenitor cell | 1.06e-31 | 120 |
hematopoietic stem cell | 2.44e-31 | 168 |
hematopoietic cell | 1.87e-29 | 177 |
neutrophil | 1.76e-18 | 3 |
granulocyte | 1.94e-18 | 8 |
blood cell | 2.37e-13 | 11 |
eosinophil | 6.70e-13 | 2 |
mesenchymal cell | 1.00e-11 | 354 |
connective tissue cell | 2.23e-11 | 361 |
motile cell | 3.75e-10 | 386 |
multi fate stem cell | 1.19e-08 | 427 |
somatic stem cell | 1.92e-08 | 433 |
stem cell | 3.57e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.82e-53 | 76 |
bone element | 9.74e-49 | 82 |
hematopoietic system | 2.03e-46 | 98 |
blood island | 2.03e-46 | 98 |
skeletal element | 5.68e-44 | 90 |
immune system | 2.15e-42 | 93 |
hemolymphoid system | 1.22e-41 | 108 |
skeletal system | 4.49e-39 | 100 |
musculoskeletal system | 2.84e-21 | 167 |
lateral plate mesoderm | 1.46e-19 | 203 |
connective tissue | 6.66e-11 | 371 |
mesoderm | 1.54e-10 | 315 |
mesoderm-derived structure | 1.54e-10 | 315 |
presumptive mesoderm | 1.54e-10 | 315 |