FFCP PHASE1:Hg19::chr11:63656362..63656387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2011 | |EntrezGene=2011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3332 | |HGNC=3332 | ||
|TSSclassifier=strong | |||
|UniProt=Q5DNC5 | |UniProt=Q5DNC5 | ||
|association_with_transcript=-9bp_to_ENST00000535394_5end | |association_with_transcript=-9bp_to_ENST00000535394_5end | ||
|cluster_id=chr11:63656362..63656387,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_5_at_MARK2_5end | |description=CAGE_peak_5_at_MARK2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000223!5.05e-11!59;CL:0002076!2.36e-09!43 | |ontology_enrichment_celltype=CL:0000223!5.05e-11!59;CL:0002076!2.36e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0000575;6.35e-18;2!CL:0002252;7.88e-10;1 | |ontology_enrichment_celltype_v019=CL:0000575;6.35e-18;2!CL:0002252;7.88e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,8.24e-18,2;CL:0002252,6.33e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.06e-10;1!UBERON:0001045;4.06e-10;1 | |ontology_enrichment_development_v019=UBERON:0009143;4.06e-10;1!UBERON:0001045;4.06e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.86e-15!169;UBERON:0000925!6.86e-15!169;UBERON:0006595!6.86e-15!169;UBERON:0001007!4.90e-11!155;UBERON:0001555!4.90e-11!155;UBERON:0007026!4.90e-11!155;UBERON:0004921!5.23e-10!129;UBERON:0004185!5.23e-10!129;UBERON:0007023!1.89e-09!115;UBERON:0000062!9.09e-08!511;UBERON:0000064!2.02e-07!219;UBERON:0005911!3.03e-07!82 | |ontology_enrichment_uberon=UBERON:0004119!6.86e-15!169;UBERON:0000925!6.86e-15!169;UBERON:0006595!6.86e-15!169;UBERON:0001007!4.90e-11!155;UBERON:0001555!4.90e-11!155;UBERON:0007026!4.90e-11!155;UBERON:0004921!5.23e-10!129;UBERON:0004185!5.23e-10!129;UBERON:0007023!1.89e-09!115;UBERON:0000062!9.09e-08!511;UBERON:0000064!2.02e-07!219;UBERON:0005911!3.03e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.17e-30;17!UBERON:0004921;2.88e-26;33!UBERON:0005409;1.41e-23;22!UBERON:0002108;1.38e-16;4!UBERON:0001155;3.85e-16;9!UBERON:0000059;3.03e-13;11!UBERON:0001043;1.84e-12;3!UBERON:0001555;2.12e-12;54!UBERON:0001007;1.54e-10;81!UBERON:0002372;4.06e-10;1!UBERON:0001154;4.06e-10;1!UBERON:0001153;4.06e-10;1!UBERON:0009854;4.06e-10;1!UBERON:0001961;4.06e-10;1!UBERON:0001744;4.06e-10;1!UBERON:0001042;4.06e-10;1!UBERON:0001735;4.06e-10;1!UBERON:0000964;1.97e-09;4!UBERON:0010409;1.97e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0000160;2.17e-30;17!UBERON:0004921;2.88e-26;33!UBERON:0005409;1.41e-23;22!UBERON:0002108;1.38e-16;4!UBERON:0001155;3.85e-16;9!UBERON:0000059;3.03e-13;11!UBERON:0001043;1.84e-12;3!UBERON:0001555;2.12e-12;54!UBERON:0001007;1.54e-10;81!UBERON:0002372;4.06e-10;1!UBERON:0001154;4.06e-10;1!UBERON:0001153;4.06e-10;1!UBERON:0009854;4.06e-10;1!UBERON:0001961;4.06e-10;1!UBERON:0001744;4.06e-10;1!UBERON:0001042;4.06e-10;1!UBERON:0001735;4.06e-10;1!UBERON:0000964;1.97e-09;4!UBERON:0010409;1.97e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.35e-30,17;UBERON:0005409,1.01e-20,25;UBERON:0002108,1.70e-16,4;UBERON:0001155,4.09e-16,9;UBERON:0004921,5.85e-14,118;UBERON:0000059,3.18e-13,11;UBERON:0001043,1.59e-12,3;UBERON:0009143,1.59e-12,3;UBERON:0004119,3.83e-11,160;UBERON:0000925,3.83e-11,160;UBERON:0006595,3.83e-11,160;UBERON:0001007,6.74e-11,145;UBERON:0001555,6.74e-11,145;UBERON:0007026,6.74e-11,145;UBERON:0002372,3.40e-10,1;UBERON:0001961,3.40e-10,1;UBERON:0001744,3.40e-10,1;UBERON:0001735,3.40e-10,1;UBERON:0001154,4.44e-10,1;UBERON:0001153,4.44e-10,1;UBERON:0001045,4.44e-10,1;UBERON:0000964,2.24e-09,4;UBERON:0010409,2.24e-09,4;UBERON:0004348,2.24e-09,4;UBERON:0005427,2.24e-09,4;UBERON:0011216,4.05e-07,223 | |||
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| ||
|short_description=p5@MARK2 | |short_description=p5@MARK2 | ||
}} | }} |
Latest revision as of 00:31, 19 September 2015
Short description: | p5@MARK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MARK2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -9bp_to_ENST00000535394_5end |
EntrezGene: | MARK2 |
HGNC: | 3332 |
UniProt: | Q5DNC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 8.24e-18 | 2 |
epithelial cell of esophagus | 6.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.35e-30 | 17 |
gastrointestinal system | 1.01e-20 | 25 |
small intestine | 1.70e-16 | 4 |
colon | 4.09e-16 | 9 |
subdivision of digestive tract | 5.85e-14 | 118 |
large intestine | 3.18e-13 | 11 |
esophagus | 1.59e-12 | 3 |
esophageal region | 1.59e-12 | 3 |
endoderm-derived structure | 3.83e-11 | 160 |
endoderm | 3.83e-11 | 160 |
presumptive endoderm | 3.83e-11 | 160 |
digestive system | 6.74e-11 | 145 |
digestive tract | 6.74e-11 | 145 |
primitive gut | 6.74e-11 | 145 |
tonsil | 3.40e-10 | 1 |
mucosa-associated lymphoid tissue | 3.40e-10 | 1 |
lymphoid tissue | 3.40e-10 | 1 |
tonsillar ring | 3.40e-10 | 1 |
vermiform appendix | 4.44e-10 | 1 |
caecum | 4.44e-10 | 1 |
midgut | 4.44e-10 | 1 |
cornea | 2.24e-09 | 4 |
eye surface | 2.24e-09 | 4 |
optic eminence | 2.24e-09 | 4 |
corneal primordium | 2.24e-09 | 4 |
organ system subdivision | 4.05e-07 | 223 |