FFCP PHASE1:Hg19::chr4:86396621..86396645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505856_5end | |association_with_transcript=0bp_to_ENST00000505856_5end | ||
|cluster_id=chr4:86396621..86396645,+ | |||
|description=CAGE_peak_8_at_ARHGAP24_5end | |description=CAGE_peak_8_at_ARHGAP24_5end | ||
|id=chr4:86396621..86396645,+ | |id=chr4:86396621..86396645,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.46e-30!42;CL:0000860!1.33e-26!45;CL:0000738!4.38e-25!140;CL:0002087!2.17e-24!119;CL:0002009!7.68e-24!65;CL:0002194!2.99e-22!63;CL:0000576!2.99e-22!63;CL:0000040!2.99e-22!63;CL:0000559!2.99e-22!63;CL:0000766!4.43e-21!76;CL:0002031!2.27e-20!124;CL:0000557!5.29e-20!71;CL:0000839!5.43e-18!70;CL:0000037!1.04e-17!172;CL:0000566!1.04e-17!172;CL:0000988!4.02e-17!182;CL:0002032!5.87e-16!165;CL:0000837!5.87e-16!165;CL:0000763!1.65e-12!112;CL:0000049!1.65e-12!112;CL:0000945!7.25e-11!24;CL:0000826!7.25e-11!24;CL:0000236!1.82e-10!14 | |ontology_enrichment_celltype=CL:0002057!6.46e-30!42;CL:0000860!1.33e-26!45;CL:0000738!4.38e-25!140;CL:0002087!2.17e-24!119;CL:0002009!7.68e-24!65;CL:0002194!2.99e-22!63;CL:0000576!2.99e-22!63;CL:0000040!2.99e-22!63;CL:0000559!2.99e-22!63;CL:0000766!4.43e-21!76;CL:0002031!2.27e-20!124;CL:0000557!5.29e-20!71;CL:0000839!5.43e-18!70;CL:0000037!1.04e-17!172;CL:0000566!1.04e-17!172;CL:0000988!4.02e-17!182;CL:0002032!5.87e-16!165;CL:0000837!5.87e-16!165;CL:0000763!1.65e-12!112;CL:0000049!1.65e-12!112;CL:0000945!7.25e-11!24;CL:0000826!7.25e-11!24;CL:0000236!1.82e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-34;33!CL:0002057;1.62e-34;33!CL:0000576;2.46e-27;48!CL:0000473;3.85e-24;39!CL:0000234;3.85e-24;39!CL:0000236;1.68e-19;13!CL:0000766;1.75e-17;69!CL:0002087;2.10e-16;104!CL:0000945;4.87e-14;24!CL:0000738;2.26e-11;136!CL:0000988;1.78e-07;177!CL:0000763;1.78e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.70e-43,42;CL:0002057,2.70e-43,42;CL:0000738,2.19e-42,136;CL:0002009,6.80e-40,61;CL:0002087,9.12e-40,115;CL:0000473,2.01e-38,48;CL:0000234,2.01e-38,48;CL:0002194,7.53e-37,59;CL:0000576,7.53e-37,59;CL:0000040,7.53e-37,59;CL:0000559,7.53e-37,59;CL:0000557,3.90e-35,67;CL:0002031,1.31e-34,120;CL:0000766,1.54e-34,72;CL:0000988,1.52e-33,177;CL:0000037,1.34e-32,168;CL:0000839,1.29e-31,66;CL:0002032,1.12e-28,161;CL:0000837,1.12e-28,161;CL:0000763,2.34e-23,108;CL:0000049,2.34e-23,108;CL:0000236,7.57e-18,14;CL:0000945,4.89e-14,24;CL:0000826,4.89e-14,24;CL:0002393,2.10e-07,9;CL:0002397,2.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.16e-32;42!CL:0000049;8.13e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-23!115;UBERON:0002390!1.50e-21!102;UBERON:0003061!1.50e-21!102;UBERON:0002193!9.53e-21!112;UBERON:0002371!1.87e-15!80;UBERON:0001049!2.48e-14!57;UBERON:0005068!2.48e-14!57;UBERON:0006241!2.48e-14!57;UBERON:0007135!2.48e-14!57;UBERON:0001474!4.91e-13!86;UBERON:0002405!2.88e-11!115;UBERON:0002780!3.04e-11!41;UBERON:0001890!3.04e-11!41;UBERON:0006240!3.04e-11!41;UBERON:0002616!3.66e-11!59;UBERON:0003080!1.02e-10!42;UBERON:0000955!1.71e-10!69;UBERON:0006238!1.71e-10!69;UBERON:0001017!1.78e-10!82;UBERON:0004765!5.78e-10!101;UBERON:0001434!5.78e-10!101;UBERON:0005743!7.12e-10!86;UBERON:0003075!1.14e-08!86;UBERON:0007284!1.14e-08!86;UBERON:0002020!3.17e-08!34;UBERON:0003528!3.17e-08!34;UBERON:0001893!4.16e-08!34;UBERON:0002791!9.75e-08!33;UBERON:0002346!1.21e-07!90;UBERON:0000073!1.63e-07!94;UBERON:0001016!1.63e-07!94;UBERON:0000479!2.61e-07!787;UBERON:0002619!3.19e-07!22;UBERON:0000178!3.30e-07!15;UBERON:0000179!3.30e-07!15;UBERON:0000463!3.30e-07!15;UBERON:0001869!5.51e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.12e-23!115;UBERON:0002390!1.50e-21!102;UBERON:0003061!1.50e-21!102;UBERON:0002193!9.53e-21!112;UBERON:0002371!1.87e-15!80;UBERON:0001049!2.48e-14!57;UBERON:0005068!2.48e-14!57;UBERON:0006241!2.48e-14!57;UBERON:0007135!2.48e-14!57;UBERON:0001474!4.91e-13!86;UBERON:0002405!2.88e-11!115;UBERON:0002780!3.04e-11!41;UBERON:0001890!3.04e-11!41;UBERON:0006240!3.04e-11!41;UBERON:0002616!3.66e-11!59;UBERON:0003080!1.02e-10!42;UBERON:0000955!1.71e-10!69;UBERON:0006238!1.71e-10!69;UBERON:0001017!1.78e-10!82;UBERON:0004765!5.78e-10!101;UBERON:0001434!5.78e-10!101;UBERON:0005743!7.12e-10!86;UBERON:0003075!1.14e-08!86;UBERON:0007284!1.14e-08!86;UBERON:0002020!3.17e-08!34;UBERON:0003528!3.17e-08!34;UBERON:0001893!4.16e-08!34;UBERON:0002791!9.75e-08!33;UBERON:0002346!1.21e-07!90;UBERON:0000073!1.63e-07!94;UBERON:0001016!1.63e-07!94;UBERON:0000479!2.61e-07!787;UBERON:0002619!3.19e-07!22;UBERON:0000178!3.30e-07!15;UBERON:0000179!3.30e-07!15;UBERON:0000463!3.30e-07!15;UBERON:0001869!5.51e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.32e-09;6!UBERON:0000073;5.21e-09;53!UBERON:0002616;5.21e-09;53!UBERON:0000349;1.89e-08;5!UBERON:0002780;2.77e-08;41!UBERON:0001890;2.77e-08;41!UBERON:0000178;2.42e-07;15!UBERON:0000179;2.42e-07;15!UBERON:0000463;2.42e-07;15!UBERON:0003528;2.48e-07;34!UBERON:0002020;2.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.11e-35,98;UBERON:0003061,1.11e-35,98;UBERON:0002193,2.13e-35,108;UBERON:0002371,2.04e-29,76;UBERON:0002405,5.59e-29,93;UBERON:0001474,2.60e-26,82;UBERON:0004765,7.89e-23,90;UBERON:0001434,2.77e-19,100;UBERON:0001049,7.92e-15,56;UBERON:0005068,7.92e-15,56;UBERON:0006241,7.92e-15,56;UBERON:0007135,7.92e-15,56;UBERON:0000073,3.70e-13,53;UBERON:0002616,3.70e-13,53;UBERON:0007023,8.63e-11,114;UBERON:0003081,1.32e-10,203;UBERON:0002780,4.77e-10,41;UBERON:0001890,4.77e-10,41;UBERON:0003080,4.77e-10,41;UBERON:0006240,4.77e-10,41;UBERON:0002298,6.61e-10,6;UBERON:0001017,2.32e-09,81;UBERON:0003528,4.68e-09,34;UBERON:0002020,4.68e-09,34;UBERON:0000955,1.40e-08,68;UBERON:0006238,1.40e-08,68;UBERON:0000349,2.51e-08,5;UBERON:0002204,4.79e-08,167;UBERON:0001893,6.35e-08,34;UBERON:0003075,7.44e-08,82;UBERON:0007284,7.44e-08,82;UBERON:0001016,1.02e-07,89;UBERON:0002791,2.02e-07,32;UBERON:0002346,3.49e-07,86;UBERON:0000178,3.70e-07,15;UBERON:0000179,3.70e-07,15;UBERON:0000463,3.70e-07,15 | |||
|phase1_expression=0.908391896352783,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.305653622991805,1.31360943119913,0.865818594450472,0.786728553697808,0.767658796194425,1.08371286321253,0,0,0,0,0.426507697462265,0,1.66198622559563,2.20598892217156,2.17010870715852,4.92614043327834,2.59114932815184,4.12120908214698,2.4717700592526,2.26725566213286,0.970336244751265,1.85943229524548,2.87817521615278,3.71647645074124,2.3015391385772,3.07392847834921,2.83778675866302,7.58440497620561,12.2642089880927,12.1883837934908,1.12945403725563,1.91034305040492,2.47195832889593,4.28517449319264,8.98601275813062,5.11469700639233,0.329851300186716,1.79517291859469,0.852449501065388,3.19230162491442,6.80862269629368,4.9825779919646,0.502497330513487,2.60741459210101,2.17188844705117,3.02699751316684,3.68277635987565,2.21523671208619,0.845021145247767,1.70083439972035,1.88692780957538,2.2465726229299,2.4028302854641,2.89306056054744,0.855038231223746,1.39241674039363,1.0959849225878,7.03984977845291,6.00752472388345,4.44754626931777,8.53460445133014,9.20910770182829,3.4485146397269,3.30522436392431,2.86216126360609,5.12291672198504,30.5363338472888,12.9972897562578,1.32171328579026,1.12101712596307,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,15.0249093312365,1.14398982156026,25.63056759174,0,0.860234595106124,0,0,0,0,0,0,0,1.00416183829401,0,0,0,0.367663080345869,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0.298897361103602,0.23486899728753,0.809364721840658,0.140450806702248,0.61246251376468,0,0.413303124703062,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0.984868024349589,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0.61642896765115,0.716243852959582,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,2.99602809578873,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,2.15714200818617,1.28073069364133,0,0,0,0.496215615637554,0.306923946576125,0,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.689182862422653,0.322260734604821,0.290033387828457,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.952927101831156,2.46817363851717,0,0.540031437238115,0,0.106824071127473,0,0,6.68891430452587,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,1.27753871307098,1.03051603426729,0,0,0,0.19538809540204,0,0,0.540911356951966,0,0,0,0.879049075631364,0,0,0,0,0,0,3.97659059106519,2.11004124615769,0.222617410045812,0,0,0.597743964753209,2.21027132424918,0,0,0.492339221844278,0,0,0,0,0.493217028184668,2.3948309234694,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,2.53252521113357,0,0.442317039724898,0.295547618953547,1.53569778007781,0,0.139423744278603,0.153900517007594,0,0,0,0,0.31900115973192,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0.995261931078505,0,1.22206028986725,3.55825354416746,2.10058696209055,2.19286093961456,2.56124305326573,0,1.63985112007737,3.28418620588199,0,0,0,1.20990716048664,0,1.32691817219825,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,1.13959432720582,0,0.240476460754601,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,3.42263447229983,0,0,3.94331031418972,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,2.38568906942791,3.40508515278939,0,0,0,10.1238251198175,5.41661368190565,1.21499113316049,0,0.157611414598396,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,1.32506888912221,1.42211251997706,2.77688463659649,0,0,0.427149650270779,1.25763444079733,0,2.97699613087171,0.197611631897944,8.64727448504361,0,0,0.2506898940227,0,0,0,0,0.488105059607853,1.6274820991845,1.72022758707021,4.21530395840039,2.60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| ||
|short_description=p8@ARHGAP24 | |short_description=p8@ARHGAP24 | ||
}} | }} |
Latest revision as of 03:25, 19 September 2015
Short description: | p8@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARHGAP24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505856_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.70e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-43 | 42 |
leukocyte | 2.19e-42 | 136 |
macrophage dendritic cell progenitor | 6.80e-40 | 61 |
nongranular leukocyte | 9.12e-40 | 115 |
defensive cell | 2.01e-38 | 48 |
phagocyte | 2.01e-38 | 48 |
monopoietic cell | 7.53e-37 | 59 |
monocyte | 7.53e-37 | 59 |
monoblast | 7.53e-37 | 59 |
promonocyte | 7.53e-37 | 59 |
granulocyte monocyte progenitor cell | 3.90e-35 | 67 |
hematopoietic lineage restricted progenitor cell | 1.31e-34 | 120 |
myeloid leukocyte | 1.54e-34 | 72 |
hematopoietic cell | 1.52e-33 | 177 |
hematopoietic stem cell | 1.34e-32 | 168 |
myeloid lineage restricted progenitor cell | 1.29e-31 | 66 |
hematopoietic oligopotent progenitor cell | 1.12e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-28 | 161 |
myeloid cell | 2.34e-23 | 108 |
common myeloid progenitor | 2.34e-23 | 108 |
B cell | 7.57e-18 | 14 |
lymphocyte of B lineage | 4.89e-14 | 24 |
pro-B cell | 4.89e-14 | 24 |
intermediate monocyte | 2.10e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.11e-35 | 98 |
blood island | 1.11e-35 | 98 |
hemolymphoid system | 2.13e-35 | 108 |
bone marrow | 2.04e-29 | 76 |
immune system | 5.59e-29 | 93 |
bone element | 2.60e-26 | 82 |
skeletal element | 7.89e-23 | 90 |
skeletal system | 2.77e-19 | 100 |
neural tube | 7.92e-15 | 56 |
neural rod | 7.92e-15 | 56 |
future spinal cord | 7.92e-15 | 56 |
neural keel | 7.92e-15 | 56 |
regional part of nervous system | 3.70e-13 | 53 |
regional part of brain | 3.70e-13 | 53 |
adult organism | 8.63e-11 | 114 |
lateral plate mesoderm | 1.32e-10 | 203 |
regional part of forebrain | 4.77e-10 | 41 |
forebrain | 4.77e-10 | 41 |
anterior neural tube | 4.77e-10 | 41 |
future forebrain | 4.77e-10 | 41 |
brainstem | 6.61e-10 | 6 |
central nervous system | 2.32e-09 | 81 |
brain grey matter | 4.68e-09 | 34 |
gray matter | 4.68e-09 | 34 |
brain | 1.40e-08 | 68 |
future brain | 1.40e-08 | 68 |
limbic system | 2.51e-08 | 5 |
musculoskeletal system | 4.79e-08 | 167 |
telencephalon | 6.35e-08 | 34 |
neural plate | 7.44e-08 | 82 |
presumptive neural plate | 7.44e-08 | 82 |
nervous system | 1.02e-07 | 89 |
regional part of telencephalon | 2.02e-07 | 32 |
neurectoderm | 3.49e-07 | 86 |
blood | 3.70e-07 | 15 |
haemolymphatic fluid | 3.70e-07 | 15 |
organism substance | 3.70e-07 | 15 |