FFCP PHASE1:Hg19::chr15:75498958..75498974,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56905 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24497 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=173bp_to_AK123746_5end | |||
|cluster_id=chr15:75498958..75498974,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_6_at_C15orf39_5end | |||
|id=chr15:75498958..75498974,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.06e-28!45;CL:0002057!2.72e-28!42;CL:0000766!3.32e-24!76;CL:0000763!6.57e-22!112;CL:0000049!6.57e-22!112;CL:0000557!2.37e-18!71;CL:0000839!3.46e-18!70;CL:0002194!5.62e-18!63;CL:0000576!5.62e-18!63;CL:0000040!5.62e-18!63;CL:0000559!5.62e-18!63;CL:0002009!1.67e-17!65;CL:0000738!1.89e-16!140;CL:0002032!6.48e-16!165;CL:0000837!6.48e-16!165;CL:0000037!6.98e-16!172;CL:0000566!6.98e-16!172;CL:0000988!2.02e-14!182;CL:0002087!7.39e-12!119;CL:0002031!1.93e-11!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-71;33!CL:0002057;2.24e-71;33!CL:0000473;1.04e-49;39!CL:0000234;1.04e-49;39!CL:0000576;2.44e-39;48!CL:0000766;3.06e-28;69!CL:0000763;3.32e-16;100!CL:0000775;3.08e-12;3!CL:0002087;1.29e-11;104!CL:0000094;2.19e-11;8!CL:0000738;1.55e-09;136!CL:0000081;3.61e-08;11!CL:0000988;5.26e-08;177!CL:0000771;6.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-73,42;CL:0002057,1.14e-73,42;CL:0000473,2.04e-63,48;CL:0000234,2.04e-63,48;CL:0000766,8.24e-58,72;CL:0002194,4.58e-49,59;CL:0000576,4.58e-49,59;CL:0000040,4.58e-49,59;CL:0000559,4.58e-49,59;CL:0002009,3.25e-47,61;CL:0000839,4.65e-46,66;CL:0000557,2.95e-45,67;CL:0000763,1.22e-44,108;CL:0000049,1.22e-44,108;CL:0000738,1.62e-33,136;CL:0002032,1.15e-31,161;CL:0000837,1.15e-31,161;CL:0000037,1.40e-31,168;CL:0000988,1.95e-29,177;CL:0002087,2.19e-28,115;CL:0002031,7.89e-27,120;CL:0000134,1.99e-12,354;CL:0000775,3.09e-12,3;CL:0002320,5.69e-12,361;CL:0000094,2.27e-11,8;CL:0000219,2.30e-10,386;CL:0000048,2.08e-08,427;CL:0000081,3.70e-08,11;CL:0000723,3.85e-08,433;CL:0000771,6.54e-08,2;CL:0000034,8.55e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.82e-55;42!CL:0000049;3.87e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.81e-17!102;UBERON:0003061!2.81e-17!102;UBERON:0002371!7.92e-16!80;UBERON:0002193!1.51e-15!112;UBERON:0001474!1.20e-13!86;UBERON:0002405!2.59e-13!115;UBERON:0004765!5.94e-11!101;UBERON:0001434!5.94e-11!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.67e-39,76;UBERON:0001474,1.53e-35,82;UBERON:0002390,1.05e-34,98;UBERON:0003061,1.05e-34,98;UBERON:0004765,1.12e-31,90;UBERON:0002193,1.08e-30,108;UBERON:0002405,2.13e-30,93;UBERON:0001434,1.04e-27,100;UBERON:0003081,2.71e-15,203;UBERON:0002204,2.09e-13,167;UBERON:0002384,2.39e-11,371;UBERON:0000926,5.79e-08,315;UBERON:0004120,5.79e-08,315;UBERON:0006603,5.79e-08,315;UBERON:0001829,3.08e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.83392173795083,1.47781061009902,1.65292640758726,0.393364276848904,0.383829398097213,0.619264493264304,0,0.6024118375565,0,0.232401601740905,0.142169232487422,0,0.553995408531877,2.20598892217156,1.30206522429511,0,0,0,5.52513307362346,4.1566353805769,4.60909716256851,9.29716147622739,6.16751832032739,4.95530193432166,3.45230870786581,5.37937483711111,0.945928919554341,2.75796544589295,1.93645405075148,0,4.89430082810772,5.45812300115692,0.898893937780338,5.50951006267625,3.20929027076094,3.19668562899521,1.9791078011203,9.17532825059507,6.81959600852311,8.12585868160035,9.07816359505824,11.2108004819203,3.76872997885115,4.17186334736161,2.38907729175628,5.44859552370032,3.68277635987565,2.21523671208619,0.633765858935825,1.27562579979026,0.209658645508376,0.336985893439485,0.750884464207532,1.44653028027372,0.570025487482497,0.39783335439818,0.91332076882317,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0,0.384273959177026,0.130059347559878,0.328875809207352,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.785874452986276,0,0,0,0,0.26591592103773,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0,0,1.53316637465883,0,0.366403487860815,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0,0,0,0,0.250237039743928,0.554128230968366,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.194874010322397,0,0.276149695926898,0.323292113637624,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.132529768321485,0.232387885739037,0.414644220061482,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.616339038092582,1.4512968087854,0.864719720501769,0.50496973370552,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0,0.857479297891735,0.224262168690721,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0.862510299438069,0.385029108839245,0.254094624222463,0,0,0,0,10.4860983352606,29.9161459204025,18.2342825911856,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.343143423810856,0.620304078368662,0.647142602455851,1.49418580924822,0,0,0.30239029332968,0,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0,0.232420756919918,0.120859449591622,0,0.368323955743585,0.459257792658427,0,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,1.95018073810956,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0.411362273086194,0,0.540031437238115,1.58625035258854,0.213648142254946,0,0,0,0.144269212976445,0,0.318852545457645,0.199579371432817,0.191505370132367,2.32840940996271,0.324621940274555,0.561594356226918,0,1.09675927041116,0,0.338583555603207,0.1605880751037,0.403599414382095,0,0.687010689511529,0.614481528616916,0,0.500547425135725,1.17232857241224,0,0,0.270455678475983,0,0,0.18714054040822,0.586032717087576,0,0.334330152832435,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0.358042349351218,1.53471711068062,0.197286811273867,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0.341380344856499,0.508507300585533,0,0.689486746482929,0,0,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0.23056390438806,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0,0.979396848954886,0,0.216388639742091,0.995261931078505,0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| |||
|short_description=p6@C15orf39 | |||
}} |
Latest revision as of 03:29, 19 September 2015
Short description: | p6@C15orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C15orf39_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 173bp_to_AK123746_5end |
EntrezGene: | C15orf39 |
HGNC: | 24497 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-73 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-73 | 42 |
defensive cell | 2.04e-63 | 48 |
phagocyte | 2.04e-63 | 48 |
myeloid leukocyte | 8.24e-58 | 72 |
monopoietic cell | 4.58e-49 | 59 |
monocyte | 4.58e-49 | 59 |
monoblast | 4.58e-49 | 59 |
promonocyte | 4.58e-49 | 59 |
macrophage dendritic cell progenitor | 3.25e-47 | 61 |
myeloid lineage restricted progenitor cell | 4.65e-46 | 66 |
granulocyte monocyte progenitor cell | 2.95e-45 | 67 |
myeloid cell | 1.22e-44 | 108 |
common myeloid progenitor | 1.22e-44 | 108 |
leukocyte | 1.62e-33 | 136 |
hematopoietic oligopotent progenitor cell | 1.15e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-31 | 161 |
hematopoietic stem cell | 1.40e-31 | 168 |
hematopoietic cell | 1.95e-29 | 177 |
nongranular leukocyte | 2.19e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 7.89e-27 | 120 |
mesenchymal cell | 1.99e-12 | 354 |
neutrophil | 3.09e-12 | 3 |
connective tissue cell | 5.69e-12 | 361 |
granulocyte | 2.27e-11 | 8 |
motile cell | 2.30e-10 | 386 |
multi fate stem cell | 2.08e-08 | 427 |
blood cell | 3.70e-08 | 11 |
somatic stem cell | 3.85e-08 | 433 |
eosinophil | 6.54e-08 | 2 |
stem cell | 8.55e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.67e-39 | 76 |
bone element | 1.53e-35 | 82 |
hematopoietic system | 1.05e-34 | 98 |
blood island | 1.05e-34 | 98 |
skeletal element | 1.12e-31 | 90 |
hemolymphoid system | 1.08e-30 | 108 |
immune system | 2.13e-30 | 93 |
skeletal system | 1.04e-27 | 100 |
lateral plate mesoderm | 2.71e-15 | 203 |
musculoskeletal system | 2.09e-13 | 167 |
connective tissue | 2.39e-11 | 371 |
mesoderm | 5.79e-08 | 315 |
mesoderm-derived structure | 5.79e-08 | 315 |
presumptive mesoderm | 5.79e-08 | 315 |
major salivary gland | 3.08e-07 | 2 |