FFCP PHASE1:Hg19::chr2:99061298..99061377,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:99061298..99061377,+
|short_description=p1@INPP4A
|description=CAGE_peak_1_at_INPP4A_5end
|association_with_transcript=0bp_to_ENST00000074304,ENST000004090...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3631 | |EntrezGene=3631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6074 | |HGNC=6074 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PE3,B8ZZB2,F5H860 | |UniProt=Q96PE3,B8ZZB2,F5H860 | ||
|association_with_transcript=0bp_to_ENST00000074304,ENST00000409016,ENST00000409463,ENST00000409851,ENST00000545415,NM_001134224,NM_001134225,NM_001566,NM_004027,uc002syx.2,uc002syy.2,uc010fik.2,uc010yvj.1,uc010yvk.1_5end | |||
|cluster_id=chr2:99061298..99061377,+ | |||
|coexpression_cluster_id=C1402 | |||
|description=CAGE_peak_1_at_INPP4A_5end | |||
|id=chr2:99061298..99061377,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.54e-22!119;CL:0000738!1.36e-20!140;CL:0000037!3.77e-17!172;CL:0000566!3.77e-17!172;CL:0002031!1.43e-15!124;CL:0000766!7.92e-15!76;CL:0002194!1.05e-14!63;CL:0000576!1.05e-14!63;CL:0000040!1.05e-14!63;CL:0000559!1.05e-14!63;CL:0002032!1.27e-14!165;CL:0000837!1.27e-14!165;CL:0000988!3.10e-14!182;CL:0002057!4.43e-14!42;CL:0002009!2.71e-13!65;CL:0000860!5.48e-12!45;CL:0000791!2.37e-11!18;CL:0000789!2.37e-11!18;CL:0002420!2.37e-11!18;CL:0002419!2.37e-11!18;CL:0000790!2.37e-11!18;CL:0000084!2.60e-11!25;CL:0000827!2.60e-11!25;CL:0000557!7.68e-11!71;CL:0000839!1.78e-10!70;CL:0000763!2.24e-08!112;CL:0000049!2.24e-08!112;CL:0000625!3.95e-08!11;CL:0000542!6.39e-07!53;CL:0000051!6.39e-07!53;CL:0000838!7.49e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.13e-11;18!CL:0000789;2.13e-11;18!CL:0002419;2.13e-11;18!CL:0000084;2.28e-11;25!CL:0000576;8.96e-10;48!CL:0000473;2.71e-09;39!CL:0000234;2.71e-09;39!CL:0000860;3.83e-09;33!CL:0002057;3.83e-09;33!CL:0000625;3.70e-08;11!CL:0002087;1.70e-07;104!CL:0000766;2.67e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,8.11e-24,115;CL:0000738,5.66e-22,136;CL:0000037,3.32e-18,168;CL:0002031,8.39e-17,120;CL:0002194,1.19e-16,59;CL:0000576,1.19e-16,59;CL:0000040,1.19e-16,59;CL:0000559,1.19e-16,59;CL:0000766,1.59e-16,72;CL:0000473,1.03e-15,48;CL:0000234,1.03e-15,48;CL:0002032,1.36e-15,161;CL:0000837,1.36e-15,161;CL:0000988,2.63e-15,177;CL:0002009,4.74e-15,61;CL:0000860,4.43e-14,42;CL:0002057,4.43e-14,42;CL:0000557,3.03e-12,67;CL:0000839,7.38e-12,66;CL:0000791,2.37e-11,18;CL:0000789,2.37e-11,18;CL:0002420,2.37e-11,18;CL:0002419,2.37e-11,18;CL:0000790,2.37e-11,18;CL:0000084,2.60e-11,25;CL:0000827,2.60e-11,25;CL:0000763,3.21e-09,108;CL:0000049,3.21e-09,108;CL:0000625,3.95e-08,11;CL:0000542,6.39e-07,53;CL:0000051,6.39e-07,53;CL:0000838,7.49e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;2.13e-11;18!CL:0002057;1.78e-10;42!UBERON:0006601;9.16e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-24!115;UBERON:0001017!1.37e-19!82;UBERON:0001049!2.87e-19!57;UBERON:0005068!2.87e-19!57;UBERON:0006241!2.87e-19!57;UBERON:0007135!2.87e-19!57;UBERON:0005743!7.68e-18!86;UBERON:0000073!1.84e-17!94;UBERON:0001016!1.84e-17!94;UBERON:0000955!3.24e-17!69;UBERON:0006238!3.24e-17!69;UBERON:0002616!1.53e-16!59;UBERON:0002780!4.06e-16!41;UBERON:0001890!4.06e-16!41;UBERON:0006240!4.06e-16!41;UBERON:0003080!4.95e-16!42;UBERON:0002390!7.99e-15!102;UBERON:0003061!7.99e-15!102;UBERON:0001893!8.57e-15!34;UBERON:0001869!1.26e-14!32;UBERON:0002020!1.29e-14!34;UBERON:0003528!1.29e-14!34;UBERON:0002791!3.38e-14!33;UBERON:0002193!1.25e-13!112;UBERON:0002619!1.44e-12!22;UBERON:0001950!1.10e-11!20;UBERON:0000956!1.76e-11!25;UBERON:0000203!1.76e-11!25;UBERON:0003075!5.82e-10!86;UBERON:0007284!5.82e-10!86;UBERON:0002346!7.20e-10!90;UBERON:0001474!2.67e-09!86;UBERON:0002371!1.52e-08!80;UBERON:0003056!1.57e-07!61;UBERON:0002405!3.15e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.99e-13;32!UBERON:0001893;7.09e-13;34!UBERON:0003528;8.71e-13;34!UBERON:0002020;8.71e-13;34!UBERON:0002791;9.25e-13;32!UBERON:0002619;1.37e-12;22!UBERON:0002780;6.85e-12;41!UBERON:0001890;6.85e-12;41!UBERON:0001950;1.03e-11;20!UBERON:0000956;1.80e-11;25!UBERON:0000203;1.80e-11;25!UBERON:0000073;7.63e-11;53!UBERON:0002616;7.63e-11;53!UBERON:0001017;4.21e-09;75!UBERON:0000955;1.05e-08;68!UBERON:0001016;5.46e-08;83!UBERON:0007023;2.16e-07;114 | |||
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| ||
|short_description=p1@INPP4A | |||
}} | }} |
Latest revision as of 03:44, 19 September 2015
Short description: | p1@INPP4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_INPP4A_5end |
Coexpression cluster: | C1402_hippocampus_occipital_medial_pineal_temporal_parietal_amygdala |
Association with transcript: | 0bp_to_ENST00000074304, ENST00000409016, ENST00000409463, ENST00000409851, ENST00000545415, NM_001134224, NM_001134225, NM_001566, NM_004027, uc002syx.2, uc002syy.2, uc010fik.2, uc010yvj.1, uc010yvk.1_5end |
EntrezGene: | INPP4A |
HGNC: | 6074 |
UniProt: | Q96PE3B8ZZB2F5H860 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.62e-24 | 114 |
central nervous system | 1.37e-19 | 81 |
neural tube | 2.50e-19 | 56 |
neural rod | 2.50e-19 | 56 |
future spinal cord | 2.50e-19 | 56 |
neural keel | 2.50e-19 | 56 |
nervous system | 4.77e-19 | 89 |
regional part of nervous system | 2.55e-18 | 53 |
regional part of brain | 2.55e-18 | 53 |
brain | 3.18e-17 | 68 |
future brain | 3.18e-17 | 68 |
hematopoietic system | 3.44e-16 | 98 |
blood island | 3.44e-16 | 98 |
regional part of forebrain | 4.06e-16 | 41 |
forebrain | 4.06e-16 | 41 |
anterior neural tube | 4.06e-16 | 41 |
future forebrain | 4.06e-16 | 41 |
hemolymphoid system | 7.85e-15 | 108 |
telencephalon | 8.57e-15 | 34 |
cerebral hemisphere | 1.26e-14 | 32 |
brain grey matter | 1.29e-14 | 34 |
gray matter | 1.29e-14 | 34 |
regional part of telencephalon | 5.93e-14 | 32 |
regional part of cerebral cortex | 1.44e-12 | 22 |
neocortex | 1.10e-11 | 20 |
cerebral cortex | 1.76e-11 | 25 |
pallium | 1.76e-11 | 25 |
immune system | 6.23e-11 | 93 |
bone element | 2.17e-10 | 82 |
neural plate | 5.75e-10 | 82 |
presumptive neural plate | 5.75e-10 | 82 |
neurectoderm | 7.33e-10 | 86 |
bone marrow | 1.28e-09 | 76 |
pre-chordal neural plate | 1.19e-07 | 61 |
skeletal element | 7.39e-07 | 90 |