FFCP PHASE1:Hg19::chr3:57994140..57994156,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:57994140..57994156,+ to FFCP PHASE1:Hg19::chr3:57994140..57994156,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2317 | |EntrezGene=2317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3755 | |HGNC=3755 | ||
|TSSclassifier=strong | |||
|UniProt=O75369,Q60FE7,B2ZZ83 | |UniProt=O75369,Q60FE7,B2ZZ83 | ||
|association_with_transcript=13bp_to_ENST00000295956,ENST00000348383,ENST00000357272,ENST00000358537,ENST00000429972,ENST00000490882,NM_001164317,NM_001164318,NM_001164319,NM_001457,uc003djj.2,uc003djk.2,uc010hne.2,uc010hnf.2_5end | |||
|cluster_id=chr3:57994140..57994156,+ | |||
|description=CAGE_peak_1_at_FLNB_5end | |||
|id=chr3:57994140..57994156,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.92e-41!254;CL:0000220!2.76e-22!246;CL:0002321!3.18e-22!248;CL:0000076!2.49e-17!62;CL:0000222!2.17e-15!119;CL:0000213!1.25e-14!57;CL:0000215!1.25e-14!57;CL:0002139!1.47e-13!24;CL:0002078!1.33e-12!44;CL:0000115!2.23e-12!35;CL:0000071!4.50e-11!18;CL:0002546!4.50e-11!18;CL:0000223!1.01e-08!59;CL:1000449!2.38e-07!16;CL:1000497!2.88e-07!18;CL:0002518!2.88e-07!18;CL:0002076!3.11e-07!43;CL:1000413!9.35e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.49e-13;24!CL:0000071;4.53e-11;18!CL:0000115;7.86e-11;36!CL:0000213;2.49e-09;58!CL:0000215;2.49e-09;58!CL:0002078;1.66e-08;45!CL:0000076;1.69e-08;63!CL:1000449;3.44e-08;15!CL:1000497;5.02e-08;17!CL:0002518;5.02e-08;17!CL:0002681;5.97e-07;12!CL:0002584;5.97e-07;12!CL:1000413;9.28e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.43e-41,253;CL:0002321,2.44e-22,250;CL:0000076,7.79e-17,63;CL:0000222,1.98e-15,121;CL:0000213,4.47e-15,58;CL:0000215,4.47e-15,58;CL:0002139,1.47e-13,24;CL:0002078,4.75e-13,45;CL:0000115,7.71e-13,36;CL:0000071,4.50e-11,18;CL:0002546,4.50e-11,18;CL:0000223,4.98e-09,58;CL:1000449,3.49e-08,15;CL:1000497,5.10e-08,17;CL:0002518,5.10e-08,17;CL:0002076,1.46e-07,42;CL:0002681,6.08e-07,12;CL:0002584,6.08e-07,12;CL:1000413,9.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.53e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.79e-20!118;UBERON:0002049!3.94e-19!79;UBERON:0007798!3.94e-19!79;UBERON:0000055!5.61e-17!69;UBERON:0002100!7.62e-15!216;UBERON:0001981!1.04e-14!60;UBERON:0007500!1.04e-14!60;UBERON:0004537!1.04e-14!60;UBERON:0006965!1.04e-14!60;UBERON:0000490!1.27e-14!138;UBERON:0000466!2.31e-13!126;UBERON:0004872!2.46e-13!84;UBERON:0000468!2.69e-13!659;UBERON:0000119!4.32e-13!312;UBERON:0004119!7.20e-13!169;UBERON:0000925!7.20e-13!169;UBERON:0006595!7.20e-13!169;UBERON:0003104!9.32e-13!238;UBERON:0009142!9.32e-13!238;UBERON:0000483!1.01e-12!309;UBERON:0000467!1.04e-12!625;UBERON:0000480!2.35e-12!626;UBERON:0000477!8.84e-12!286;UBERON:0004111!1.01e-11!241;UBERON:0001986!4.50e-11!18;UBERON:0004638!4.50e-11!18;UBERON:0004852!4.50e-11!18;UBERON:0009569!7.30e-11!113;UBERON:0000475!1.09e-10!365;UBERON:0005177!1.27e-10!107;UBERON:0001048!2.05e-10!168;UBERON:0000487!2.63e-10!22;UBERON:0000464!3.43e-10!104;UBERON:0001008!5.08e-10!45;UBERON:0005256!5.75e-10!143;UBERON:0006554!8.13e-10!44;UBERON:0003886!1.29e-09!63;UBERON:0001637!1.67e-09!42;UBERON:0003509!1.67e-09!42;UBERON:0004572!1.67e-09!42;UBERON:0001007!5.11e-09!155;UBERON:0001555!5.11e-09!155;UBERON:0007026!5.11e-09!155;UBERON:0005911!6.34e-09!82;UBERON:0000481!6.38e-09!347;UBERON:0004535!7.91e-09!110;UBERON:0003064!1.59e-08!37;UBERON:0001009!1.88e-08!113;UBERON:0002553!1.91e-08!70;UBERON:0006914!2.33e-08!25;UBERON:0000058!3.53e-08!26;UBERON:0004876!4.08e-08!20;UBERON:0005172!4.44e-08!55;UBERON:0005173!4.44e-08!55;UBERON:0000025!7.91e-08!194;UBERON:0002417!9.16e-08!61;UBERON:0000916!9.16e-08!61;UBERON:0000080!1.10e-07!18;UBERON:0002120!1.10e-07!18;UBERON:0004875!1.10e-07!18;UBERON:0005721!1.10e-07!18;UBERON:0005754!1.10e-07!18;UBERON:0007297!1.10e-07!18;UBERON:0000077!1.19e-07!130;UBERON:0005631!1.30e-07!14;UBERON:0000158!1.30e-07!14;UBERON:0004921!1.60e-07!129;UBERON:0004185!1.60e-07!129;UBERON:0006555!1.97e-07!17;UBERON:0005103!1.97e-07!17;UBERON:0000083!1.97e-07!17;UBERON:0009201!1.97e-07!17;UBERON:0004819!1.97e-07!17;UBERON:0006553!1.97e-07!17;UBERON:0003074!1.97e-07!17;UBERON:0003060!1.97e-07!17;UBERON:0004211!2.38e-07!16;UBERON:0001285!2.38e-07!16;UBERON:0007684!2.38e-07!16;UBERON:0003220!2.38e-07!16;UBERON:0004208!2.38e-07!16;UBERON:0000353!2.64e-07!17;UBERON:0000922!5.68e-07!612;UBERON:0004573!6.14e-07!33;UBERON:0004571!6.14e-07!33;UBERON:0002113!7.69e-07!27;UBERON:0003918!7.69e-07!27;UBERON:0005095!7.69e-07!27;UBERON:0007687!7.69e-07!27;UBERON:0002050!8.34e-07!605;UBERON:0005423!8.34e-07!605;UBERON:0000062!8.40e-07!511;UBERON:0000923!9.07e-07!604;UBERON:0005291!9.07e-07!604;UBERON:0006598!9.07e-07!604;UBERON:0002532!9.07e-07!604;UBERON:0003929!9.27e-07!54;UBERON:0003915!9.35e-07!9;UBERON:0004700!9.35e-07!9;UBERON:0001917!9.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.53e-11;18!UBERON:0001986;4.53e-11;18!UBERON:0004852;4.53e-11;18!UBERON:0000490;7.57e-11;33!UBERON:0000487;2.63e-10;22!UBERON:0000055;9.14e-10;65!UBERON:0003914;1.46e-09;74!UBERON:0006554;3.20e-09;30!UBERON:0001008;3.20e-09;30!UBERON:0007500;4.30e-09;56!UBERON:0001981;4.30e-09;56!UBERON:0004537;4.30e-09;56!UBERON:0006914;2.37e-08;25!UBERON:0002049;2.66e-08;75!UBERON:0007798;2.66e-08;75!UBERON:0006555;3.44e-08;15!UBERON:0004819;3.44e-08;15!UBERON:0001285;3.44e-08;15!UBERON:0007684;3.44e-08;15!UBERON:0000025;5.73e-08;93!UBERON:0000353;6.10e-08;15!UBERON:0001637;1.08e-07;42!UBERON:0003509;1.08e-07;42!UBERON:0004572;1.08e-07;42!UBERON:0002113;5.45e-07;24!UBERON:0011143;5.45e-07;24!UBERON:0001225;5.97e-07;12!UBERON:0008987;5.97e-07;12!UBERON:0003915;9.28e-07;9!UBERON:0004700;9.28e-07;9!UBERON:0001917;9.28e-07;9 | |||
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| ||
|short_description=p1@FLNB | |||
}} | }} |
Latest revision as of 04:57, 19 September 2015
Short description: | p1@FLNB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLNB_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000295956, ENST00000348383, ENST00000357272, ENST00000358537, ENST00000429972, ENST00000490882, NM_001164317, NM_001164318, NM_001164319, NM_001457, uc003djj.2, uc003djk.2, uc010hne.2, uc010hnf.2_5end |
EntrezGene: | FLNB |
HGNC: | 3755 |
UniProt: | O75369Q60FE7B2ZZ83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.43e-41 | 253 |
embryonic cell | 2.44e-22 | 250 |
squamous epithelial cell | 7.79e-17 | 63 |
mesodermal cell | 1.98e-15 | 121 |
lining cell | 4.47e-15 | 58 |
barrier cell | 4.47e-15 | 58 |
endothelial cell of vascular tree | 1.47e-13 | 24 |
meso-epithelial cell | 4.75e-13 | 45 |
endothelial cell | 7.71e-13 | 36 |
blood vessel endothelial cell | 4.50e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.50e-11 | 18 |
endodermal cell | 4.98e-09 | 58 |
epithelial cell of nephron | 3.49e-08 | 15 |
kidney cell | 5.10e-08 | 17 |
kidney epithelial cell | 5.10e-08 | 17 |
endo-epithelial cell | 1.46e-07 | 42 |
kidney cortical cell | 6.08e-07 | 12 |
renal cortical epithelial cell | 6.08e-07 | 12 |
endothelial cell of artery | 9.35e-07 | 9 |