FFCP PHASE1:Hg19::chr3:63428982..63429027,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132204 | |EntrezGene=132204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16507 | |HGNC=16507 | ||
|TSSclassifier=strong | |||
|UniProt=B3KVD8,C9J976,F8WDB8,C9J0A2 | |UniProt=B3KVD8,C9J976,F8WDB8,C9J0A2 | ||
|association_with_transcript=0bp_to_ENST00000460711,ENST00000465156,ENST00000472899,ENST00000478744,ENST00000479198_5end | |association_with_transcript=0bp_to_ENST00000460711,ENST00000465156,ENST00000472899,ENST00000478744,ENST00000479198_5end | ||
|cluster_id=chr3:63428982..63429027,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_2_at_SYNPR_5end | |description=CAGE_peak_2_at_SYNPR_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.56e-07;2 | |ontology_enrichment_celltype_v019=CL:0000047;1.56e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.29e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-21;82!UBERON:0006241;5.11e-11;3!UBERON:0003057;5.11e-11;3!UBERON:0010122;3.64e-09;2 | |ontology_enrichment_development_v019=UBERON:0006601;1.08e-21;82!UBERON:0006241;5.11e-11;3!UBERON:0003057;5.11e-11;3!UBERON:0010122;3.64e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-91!57;UBERON:0005068!1.16e-91!57;UBERON:0006241!1.16e-91!57;UBERON:0007135!1.16e-91!57;UBERON:0001017!5.57e-89!82;UBERON:0005743!1.60e-87!86;UBERON:0000073!2.65e-81!94;UBERON:0001016!2.65e-81!94;UBERON:0002780!1.33e-78!41;UBERON:0001890!1.33e-78!41;UBERON:0006240!1.33e-78!41;UBERON:0003080!1.54e-76!42;UBERON:0002616!3.67e-76!59;UBERON:0001893!2.78e-74!34;UBERON:0002020!5.42e-74!34;UBERON:0003528!5.42e-74!34;UBERON:0000955!3.66e-73!69;UBERON:0006238!3.66e-73!69;UBERON:0002791!1.48e-71!33;UBERON:0001869!1.81e-69!32;UBERON:0003075!1.52e-65!86;UBERON:0007284!1.52e-65!86;UBERON:0002346!3.97e-65!90;UBERON:0002619!4.14e-57!22;UBERON:0003056!7.22e-53!61;UBERON:0001950!3.64e-52!20;UBERON:0000956!8.96e-50!25;UBERON:0000203!8.96e-50!25;UBERON:0007023!2.20e-46!115;UBERON:0000924!2.47e-40!173;UBERON:0006601!2.47e-40!173;UBERON:0000033!3.67e-40!123;UBERON:0004121!9.31e-40!169;UBERON:0000153!9.47e-38!129;UBERON:0007811!9.47e-38!129;UBERON:0002420!7.68e-26!9;UBERON:0007245!7.68e-26!9;UBERON:0010009!7.68e-26!9;UBERON:0010011!7.68e-26!9;UBERON:0000454!7.68e-26!9;UBERON:0002308!1.41e-25!9;UBERON:0000125!1.41e-25!9;UBERON:0000025!2.20e-23!194;UBERON:0009663!7.37e-21!7;UBERON:0000200!4.90e-18!6;UBERON:0001871!1.18e-17!7;UBERON:0004111!1.95e-16!241;UBERON:0003076!3.09e-16!15;UBERON:0003057!3.09e-16!15;UBERON:0002298!8.20e-16!8;UBERON:0001872!7.09e-15!5;UBERON:0002021!1.58e-14!5;UBERON:0000349!1.98e-14!5;UBERON:0000477!1.45e-13!286;UBERON:0000369!2.03e-13!4;UBERON:0002435!2.03e-13!4;UBERON:0000204!2.03e-13!4;UBERON:0010082!2.03e-13!4;UBERON:0000483!2.32e-12!309;UBERON:0000119!4.02e-12!312;UBERON:0000064!2.00e-11!219;UBERON:0005383!1.69e-10!3;UBERON:0005382!1.69e-10!3;UBERON:0004733!3.92e-10!12;UBERON:0002028!3.92e-10!12;UBERON:0007277!3.92e-10!12;UBERON:0002771!5.30e-10!3;UBERON:0000475!6.23e-10!365;UBERON:0004732!2.82e-09!13;UBERON:0002240!5.27e-09!3;UBERON:0001896!6.58e-09!3;UBERON:0005290!6.58e-09!3;UBERON:0010096!6.58e-09!3;UBERON:0000988!8.44e-09!3;UBERON:0006331!1.20e-08!3;UBERON:0001873!1.56e-07!2;UBERON:0010122!1.56e-07!2;UBERON:0001897!2.78e-07!2;UBERON:0001870!2.86e-07!2;UBERON:0000062!3.46e-07!511;UBERON:0001894!4.13e-07!7;UBERON:0006222!4.13e-07!7;UBERON:0000922!4.58e-07!612;UBERON:0001875!5.67e-07!2;UBERON:0006514!5.67e-07!2;UBERON:0000923!8.24e-07!604;UBERON:0005291!8.24e-07!604;UBERON:0006598!8.24e-07!604;UBERON:0002532!8.24e-07!604;UBERON:0002050!8.97e-07!605;UBERON:0005423!8.97e-07!605 | |ontology_enrichment_uberon=UBERON:0001049!1.16e-91!57;UBERON:0005068!1.16e-91!57;UBERON:0006241!1.16e-91!57;UBERON:0007135!1.16e-91!57;UBERON:0001017!5.57e-89!82;UBERON:0005743!1.60e-87!86;UBERON:0000073!2.65e-81!94;UBERON:0001016!2.65e-81!94;UBERON:0002780!1.33e-78!41;UBERON:0001890!1.33e-78!41;UBERON:0006240!1.33e-78!41;UBERON:0003080!1.54e-76!42;UBERON:0002616!3.67e-76!59;UBERON:0001893!2.78e-74!34;UBERON:0002020!5.42e-74!34;UBERON:0003528!5.42e-74!34;UBERON:0000955!3.66e-73!69;UBERON:0006238!3.66e-73!69;UBERON:0002791!1.48e-71!33;UBERON:0001869!1.81e-69!32;UBERON:0003075!1.52e-65!86;UBERON:0007284!1.52e-65!86;UBERON:0002346!3.97e-65!90;UBERON:0002619!4.14e-57!22;UBERON:0003056!7.22e-53!61;UBERON:0001950!3.64e-52!20;UBERON:0000956!8.96e-50!25;UBERON:0000203!8.96e-50!25;UBERON:0007023!2.20e-46!115;UBERON:0000924!2.47e-40!173;UBERON:0006601!2.47e-40!173;UBERON:0000033!3.67e-40!123;UBERON:0004121!9.31e-40!169;UBERON:0000153!9.47e-38!129;UBERON:0007811!9.47e-38!129;UBERON:0002420!7.68e-26!9;UBERON:0007245!7.68e-26!9;UBERON:0010009!7.68e-26!9;UBERON:0010011!7.68e-26!9;UBERON:0000454!7.68e-26!9;UBERON:0002308!1.41e-25!9;UBERON:0000125!1.41e-25!9;UBERON:0000025!2.20e-23!194;UBERON:0009663!7.37e-21!7;UBERON:0000200!4.90e-18!6;UBERON:0001871!1.18e-17!7;UBERON:0004111!1.95e-16!241;UBERON:0003076!3.09e-16!15;UBERON:0003057!3.09e-16!15;UBERON:0002298!8.20e-16!8;UBERON:0001872!7.09e-15!5;UBERON:0002021!1.58e-14!5;UBERON:0000349!1.98e-14!5;UBERON:0000477!1.45e-13!286;UBERON:0000369!2.03e-13!4;UBERON:0002435!2.03e-13!4;UBERON:0000204!2.03e-13!4;UBERON:0010082!2.03e-13!4;UBERON:0000483!2.32e-12!309;UBERON:0000119!4.02e-12!312;UBERON:0000064!2.00e-11!219;UBERON:0005383!1.69e-10!3;UBERON:0005382!1.69e-10!3;UBERON:0004733!3.92e-10!12;UBERON:0002028!3.92e-10!12;UBERON:0007277!3.92e-10!12;UBERON:0002771!5.30e-10!3;UBERON:0000475!6.23e-10!365;UBERON:0004732!2.82e-09!13;UBERON:0002240!5.27e-09!3;UBERON:0001896!6.58e-09!3;UBERON:0005290!6.58e-09!3;UBERON:0010096!6.58e-09!3;UBERON:0000988!8.44e-09!3;UBERON:0006331!1.20e-08!3;UBERON:0001873!1.56e-07!2;UBERON:0010122!1.56e-07!2;UBERON:0001897!2.78e-07!2;UBERON:0001870!2.86e-07!2;UBERON:0000062!3.46e-07!511;UBERON:0001894!4.13e-07!7;UBERON:0006222!4.13e-07!7;UBERON:0000922!4.58e-07!612;UBERON:0001875!5.67e-07!2;UBERON:0006514!5.67e-07!2;UBERON:0000923!8.24e-07!604;UBERON:0005291!8.24e-07!604;UBERON:0006598!8.24e-07!604;UBERON:0002532!8.24e-07!604;UBERON:0002050!8.97e-07!605;UBERON:0005423!8.97e-07!605 | ||
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|short_description=p2@SYNPR | |short_description=p2@SYNPR | ||
}} | }} |
Latest revision as of 08:35, 19 September 2015
Short description: | p2@SYNPR |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYNPR_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000460711, ENST00000465156, ENST00000472899, ENST00000478744, ENST00000479198_5end |
EntrezGene: | SYNPR |
HGNC: | 16507 |
UniProt: | B3KVD8C9J976F8WDB8C9J0A2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.29e-07 | 8 |