FFCP PHASE1:Hg19::chr8:90770100..90770114,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:90770100..90770114,+
|short_description=p2@RIPK2
|description=CAGE_peak_2_at_RIPK2_5end
|association_with_transcript=38bp_to_ENST00000540020_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8767 | |EntrezGene=8767 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10020 | |HGNC=10020 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000540020_5end | |||
|cluster_id=chr8:90770100..90770114,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_RIPK2_5end | |||
|id=chr8:90770100..90770114,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.18e-36!76;CL:0000557!1.76e-32!71;CL:0002009!6.30e-30!65;CL:0000839!2.37e-29!70;CL:0002194!1.16e-28!63;CL:0000576!1.16e-28!63;CL:0000040!1.16e-28!63;CL:0000559!1.16e-28!63;CL:0002057!3.59e-28!42;CL:0000860!9.02e-28!45;CL:0000738!1.75e-25!140;CL:0000763!1.51e-20!112;CL:0000049!1.51e-20!112;CL:0002031!4.81e-20!124;CL:0002087!2.76e-19!119;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0002032!1.12e-15!165;CL:0000837!1.12e-15!165;CL:0000988!1.14e-14!182;CL:0000048!1.68e-10!430;CL:0000034!8.05e-10!444;CL:0000723!8.58e-10!436;CL:0000359!2.84e-09!32;CL:0000134!2.07e-07!358;CL:0002393!3.84e-07!9;CL:0002397!3.84e-07!9;CL:0002320!5.87e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.32e-39;33!CL:0002057;5.32e-39;33!CL:0000473;9.20e-38;39!CL:0000234;9.20e-38;39!CL:0000576;3.69e-31;48!CL:0000766;4.39e-30;69!CL:0000359;1.40e-12;32!CL:0000763;1.87e-12;100!CL:0000094;8.97e-12;8!CL:0000738;4.83e-10;136!CL:0002393;1.66e-09;6!CL:0002397;1.66e-09;6!CL:0002087;7.93e-09;104!CL:0000081;5.55e-08;11!CL:0000840;6.71e-08;5!CL:0002539;1.23e-07;10!CL:0000235;1.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.20e-72,72;CL:0000557,1.74e-64,67;CL:0000473,8.19e-61,48;CL:0000234,8.19e-61,48;CL:0002009,1.84e-60,61;CL:0000839,2.00e-58,66;CL:0002194,6.62e-58,59;CL:0000576,6.62e-58,59;CL:0000040,6.62e-58,59;CL:0000559,6.62e-58,59;CL:0000860,1.53e-54,42;CL:0002057,1.53e-54,42;CL:0000763,5.03e-45,108;CL:0000049,5.03e-45,108;CL:0000738,4.14e-44,136;CL:0000037,8.96e-33,168;CL:0002031,1.40e-32,120;CL:0002087,3.15e-31,115;CL:0000988,8.78e-30,177;CL:0002032,1.96e-28,161;CL:0000837,1.96e-28,161;CL:0000048,1.51e-21,427;CL:0000723,9.64e-21,433;CL:0000034,1.84e-20,441;CL:0000134,1.12e-14,354;CL:0002320,7.67e-14,361;CL:0000359,1.36e-13,32;CL:0002393,1.23e-12,9;CL:0002397,1.23e-12,9;CL:0000094,9.23e-12,8;CL:0000219,2.01e-11,386;CL:0000192,1.66e-08,43;CL:0000514,1.66e-08,43;CL:0000081,5.66e-08,11;CL:0000840,7.23e-08,5;CL:0001029,7.23e-08,5;CL:0002539,1.30e-07,10;CL:0000235,1.61e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;9.75e-39;42!CL:0000049;3.91e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.92e-30!80;UBERON:0002390!9.49e-27!102;UBERON:0003061!9.49e-27!102;UBERON:0001474!2.72e-26!86;UBERON:0002193!5.54e-26!112;UBERON:0003081!6.19e-25!216;UBERON:0004765!1.41e-23!101;UBERON:0001434!1.41e-23!101;UBERON:0002204!4.38e-22!167;UBERON:0002405!3.15e-21!115;UBERON:0000926!1.17e-11!448;UBERON:0004120!1.17e-11!448;UBERON:0006603!1.17e-11!448;UBERON:0001637!7.57e-10!42;UBERON:0003509!7.57e-10!42;UBERON:0004572!7.57e-10!42;UBERON:0004573!3.07e-09!33;UBERON:0004571!3.07e-09!33;UBERON:0001981!1.38e-07!60;UBERON:0007500!1.38e-07!60;UBERON:0004537!1.38e-07!60;UBERON:0006965!1.38e-07!60;UBERON:0000055!1.51e-07!69;UBERON:0004872!1.97e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.86e-10;33!UBERON:0004571;1.86e-10;33!UBERON:0001637;1.10e-08;42!UBERON:0003509;1.10e-08;42!UBERON:0004572;1.10e-08;42!UBERON:0004237;1.23e-07;10!UBERON:0004695;1.23e-07;10!UBERON:0002111;1.23e-07;10!UBERON:0004178;1.23e-07;10 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0.994192127183747,4.03395087871065,3.01347264011988,4.38186054232424,4.39139518911456,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.393553906568396,22.4217637803875,9.21190555433311,23.6868668673596,0,0,0,0.46480320348181,2.98555388223585,1.17440175733939,90.301251590696,64.9764009803259,80.7280439062969,2.01523926815932,1.29557466407592,0.257575567634187,1.59938062657521,1.51150377475524,3.39617685662943,10.4593066607558,5.34518254428373,12.078548464909,67.0323274110611,41.4980344577143,58.4111107824805,107.560652389825,49.0568359523708,47.3992703080196,3.01187743268168,2.45615535052061,4.26974620445661,108.047614006929,49.4230701697184,92.0645461150619,9.56568770541477,14.1619196911359,17.4752147718405,44.9824319874305,32.9083430320861,42.9747351806947,25.6273638561878,30.2460092683717,33.0127043951777,43.5887641896025,50.0857584943088,61.0772407760907,7.81644559354185,15.7327181974132,9.85395633889367,10.5588913277705,12.0141514273205,8.83990726833941,5.98526761856622,3.58050018958362,3.47061892152804,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,2.93618594685469,0,0,13.4522055115569,0.790152254325231,0.393419540227666,0.393010762749165,0.616804496998528,0,0,0,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0.68725489096526,0,0,0,0,0.903450714466637,0.383959833463255,1.24930726552346,0.473554504088034,0,0.80642697289893,0.534880391567015,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0.351339142772504,0.392937226493138,0,0,3.8945687238562,2.43781632218974,2.12732736830184,5.00830311041218,1.71598473234038,2.60020250930695,0.198762407366705,0,0,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0.66944122552934,4.02829317109147,0.760272105718513,0.976248230192678,2.20597848207521,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.549605231791222,30.3094960102945,46.533631697799,0,0.496971951695318,0.759783069987479,2.51577443545116,0.286836620748814,0.709336764396714,0,1.06748995729705,0.49333509683432,0.622422070799533,0.808264032418128,0.326923806226917,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0.438977620880838,0,0.751190294532984,0.340296549480063,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.161646056818812,1.06502877754984,0.906768884048762,0.339121184620975,1.35282597214308,0.818238361772504,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0,14.8697441193906,10.648666789262,12.3665198952489,0,0,1.47730203652438,4.44608103764552,2.0808362720422,0.93733833986777,0.16798212819886,0.992425680696705,0.53735113621709,0.581267877027924,0,2.46331618947972,0.352193736052904,1.65862492432618,14.7002352485301,2.90357596880674,0.190493682876507,0,0,0,0,0,0,0,0,0.1466765716419,1.16344544182,0,0,0,0,0.257207374262142,0,0.532844358032199,0,0,0,0.325736184293735,1.06617584622764,0,0.602878754119172,0,0.599837947092342,6.08118903205952,3.01354254859276,6.32501818449095,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.224170287987055,2.1673383622212,0.862510299438069,3.20857590699371,0.254094624222463,0,0,0,0,15.7291475028908,11.966458368161,9.53155680902882,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0.664225598535437,0.368738337083406,0.521301686808497,0,0,12.1993135412504,17.0414218646707,19.8513257514406,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.574890092096664,1.03850885836724,0.697262270759755,0,1.20303882181971,0.184161977871793,0.459257792658427,0,0.262248829918848,0,0.847168708148562,0,0,2.42768746453614,0,0,0,0,0.270946437543853,0,0.764628819135115,0.831076008928724,0.895499018888713,0.219259876645935,0,0,0.328014645699706,0.325378394664303,1.54561517471583,0,0,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0.275673144969061,0,0.290033387828457,0.0852266274161009,0,0,0,0.382838137483752,0.30347334256665,0.464845549297286,0.31481234683064,6.2733354314454,5.85263802334569,4.25844824253617,2.60979897622522,2.7798632865588,4.72312126248571,0,0.316379424718726,0,0,0,1.27281299170375,0.78494864019923,0.179872457583315,0,0.117812402345686,2.83055474202642,1.58510321173008,3.79132610615083,0,14.6228093778771,1.05650146756755,0.272999822815972,0,0,1.102730687092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03233 | ||
|short_description=p2@RIPK2 | |||
}} | }} |
Latest revision as of 09:42, 19 September 2015
Short description: | p2@RIPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIPK2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 38bp_to_ENST00000540020_5end |
EntrezGene: | RIPK2 |
HGNC: | 10020 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.80e-58 | 76 |
bone element | 5.46e-52 | 82 |
immune system | 5.93e-49 | 93 |
hematopoietic system | 1.54e-48 | 98 |
blood island | 1.54e-48 | 98 |
hemolymphoid system | 3.92e-47 | 108 |
skeletal element | 2.02e-45 | 90 |
lateral plate mesoderm | 9.34e-42 | 203 |
skeletal system | 1.03e-38 | 100 |
musculoskeletal system | 1.84e-37 | 167 |
mesoderm | 2.73e-25 | 315 |
mesoderm-derived structure | 2.73e-25 | 315 |
presumptive mesoderm | 2.73e-25 | 315 |
connective tissue | 1.03e-12 | 371 |
artery | 5.62e-12 | 42 |
arterial blood vessel | 5.62e-12 | 42 |
arterial system | 5.62e-12 | 42 |
systemic artery | 1.51e-11 | 33 |
systemic arterial system | 1.51e-11 | 33 |
vessel | 7.68e-08 | 68 |
blood vessel smooth muscle | 1.30e-07 | 10 |
arterial system smooth muscle | 1.30e-07 | 10 |
artery smooth muscle tissue | 1.30e-07 | 10 |
aorta smooth muscle tissue | 1.30e-07 | 10 |
epithelial tube open at both ends | 2.25e-07 | 59 |
blood vessel | 2.25e-07 | 59 |
blood vasculature | 2.25e-07 | 59 |
vascular cord | 2.25e-07 | 59 |