FFCP PHASE1:Hg19::chr3:110790904..110790935,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:110790904..110790935,+ to FFCP PHASE1:Hg19::chr3:110790904..110790935,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25945 | |EntrezGene=25945 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17664 | |HGNC=17664 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFR0,Q8NC05 | |UniProt=E9PFR0,Q8NC05 | ||
|association_with_transcript=-79bp_to_ENST00000493615,NM_001243288,uc003dxu.1_5end | |||
|cluster_id=chr3:110790904..110790935,+ | |||
|description=CAGE_peak_7_at_PVRL3_5end | |||
|id=chr3:110790904..110790935,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.39e-11!75;CL:0002620!2.31e-08!23;CL:0000055!5.37e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.17e-20;3!CL:0000067;4.17e-20;3!CL:0005012;4.17e-20;3!CL:0002304;4.17e-20;3!CL:0000306;8.85e-15;4!CL:0002222;8.85e-15;4!CL:0002224;8.85e-15;4!CL:0000540;1.38e-09;6!CL:0000404;1.38e-09;6!CL:0000075;5.72e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.95e-20,3;CL:0000067,3.95e-20,3;CL:0005012,3.95e-20,3;CL:0002304,3.95e-20,3;CL:0000306,6.58e-15,4;CL:0002222,6.58e-15,4;CL:0002224,6.58e-15,4;CL:0000047,2.41e-12,8;CL:0000540,1.11e-09,6;CL:0000031,1.11e-09,6;CL:0000404,1.11e-09,6;CL:0000075,5.21e-08,27;CL:0000133,9.16e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.38e-09;6!UBERON:0003124;2.42e-07;1!UBERON:0003099;2.42e-07;1!UBERON:0003852;2.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.12e-07!659;UBERON:0000481!3.06e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;2.60e-21;14!UBERON:0007625;2.09e-20;11!UBERON:0001778;4.17e-20;3!UBERON:0001775;4.17e-20;3!UBERON:0001456;5.53e-18;21!UBERON:0002203;3.30e-17;6!UBERON:0001768;3.30e-17;6!UBERON:0002200;3.30e-17;6!UBERON:0000019;1.79e-15;19!UBERON:0000047;1.79e-15;19!UBERON:0004088;1.79e-15;19!UBERON:0010230;1.79e-15;19!UBERON:0000488;3.23e-15;4!UBERON:0010077;8.85e-15;4!UBERON:0005389;8.85e-15;4!UBERON:0000484;8.85e-15;4!UBERON:0000965;8.85e-15;4!UBERON:0001803;8.85e-15;4!UBERON:0000970;1.18e-14;20!UBERON:0002104;6.46e-14;21!UBERON:0000020;1.25e-12;23!UBERON:0001032;4.59e-12;24!UBERON:0004456;4.59e-12;24!UBERON:0001444;1.88e-09;48!UBERON:0006876;1.94e-09;11!UBERON:0010371;5.53e-09;31!UBERON:0000033;9.08e-09;50!UBERON:0003104;2.77e-08;7!UBERON:0009142;2.77e-08;7!UBERON:0005705;2.42e-07;1!UBERON:0008193;2.42e-07;1!UBERON:0010912;2.42e-07;1!UBERON:0002514;2.42e-07;1!UBERON:0003457;2.42e-07;1!UBERON:0008907;2.42e-07;1!UBERON:0008001;2.42e-07;1!UBERON:0007213;2.42e-07;1!UBERON:0009891;2.42e-07;1!UBERON:0007914;2.42e-07;1!UBERON:0007375;2.42e-07;1!UBERON:0003323;2.42e-07;1!UBERON:0010258;2.42e-07;1!UBERON:0005253;2.42e-07;1!UBERON:0007842;2.42e-07;1!UBERON:0002397;2.42e-07;1!UBERON:0003113;2.42e-07;1!UBERON:0003277;2.42e-07;1!UBERON:0001709;2.42e-07;1!UBERON:0002244;2.42e-07;1!UBERON:0005620;2.42e-07;1!UBERON:0010364;2.42e-07;1!UBERON:0004288;2.42e-07;1!UBERON:0007811;6.23e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,2.62e-21,14;UBERON:0007625,1.63e-20,11;UBERON:0001778,3.95e-20,3;UBERON:0001775,3.95e-20,3;UBERON:0001456,3.37e-17,22;UBERON:0002203,4.35e-17,6;UBERON:0001768,4.35e-17,6;UBERON:0002200,4.35e-17,6;UBERON:0000488,3.10e-15,4;UBERON:0010077,6.58e-15,4;UBERON:0005389,6.58e-15,4;UBERON:0000484,6.58e-15,4;UBERON:0002546,6.58e-15,4;UBERON:0000965,6.58e-15,4;UBERON:0001803,6.58e-15,4;UBERON:0003073,6.58e-15,4;UBERON:0005426,6.58e-15,4;UBERON:0000019,1.18e-14,20;UBERON:0000047,1.18e-14,20;UBERON:0010312,1.18e-14,20;UBERON:0004088,1.18e-14,20;UBERON:0010230,1.18e-14,20;UBERON:0003072,1.18e-14,20;UBERON:0004128,1.18e-14,20;UBERON:0003071,1.18e-14,20;UBERON:0000970,6.50e-14,21;UBERON:0002104,6.50e-14,21;UBERON:0001444,1.89e-13,49;UBERON:0000020,4.61e-12,24;UBERON:0001032,4.61e-12,24;UBERON:0004456,4.61e-12,24;UBERON:0005085,7.20e-12,31;UBERON:0000033,1.64e-11,56;UBERON:0000153,3.38e-10,62;UBERON:0007811,3.38e-10,62;UBERON:0006876,2.24e-09,11;UBERON:0004121,7.49e-09,171;UBERON:0000924,7.49e-09,171;UBERON:0006601,7.49e-09,171;UBERON:0000076,1.10e-07,8;UBERON:0005705,1.33e-07,1;UBERON:0008193,1.33e-07,1;UBERON:0010912,1.33e-07,1;UBERON:0002514,1.33e-07,1;UBERON:0003457,1.33e-07,1;UBERON:0008907,1.33e-07,1;UBERON:0008001,1.33e-07,1;UBERON:0007213,1.33e-07,1;UBERON:0009891,1.33e-07,1;UBERON:0007914,1.33e-07,1;UBERON:0009292,1.33e-07,1;UBERON:0003099,1.33e-07,1;UBERON:0007375,1.33e-07,1;UBERON:0003323,1.33e-07,1;UBERON:0010258,1.33e-07,1;UBERON:0007842,1.33e-07,1;UBERON:0009494,1.33e-07,1;UBERON:0010042,1.33e-07,1;UBERON:0010045,1.33e-07,1;UBERON:0010259,1.33e-07,1;UBERON:0010359,1.33e-07,1;UBERON:0009526,1.33e-07,1;UBERON:0002397,1.33e-07,1;UBERON:0003113,1.33e-07,1;UBERON:0003277,1.33e-07,1;UBERON:0001709,1.33e-07,1;UBERON:0004066,1.33e-07,1;UBERON:0002244,1.33e-07,1;UBERON:0005620,1.33e-07,1;UBERON:0004362,1.33e-07,1;UBERON:0010364,1.33e-07,1;UBERON:0010046,1.33e-07,1;UBERON:0005868,1.33e-07,1;UBERON:0007238,1.33e-07,1;UBERON:0004288,1.33e-07,1;UBERON:0004068,1.33e-07,1;UBERON:0010334,1.33e-07,1;UBERON:0003852,1.33e-07,1;UBERON:0010253,1.33e-07,1 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,0,2.53299878168311,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0,0,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,6.61743720148475,3.54767035940102,3.86473057049755,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.653847612453835,0,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0,0.485618833104395,0.421352420106746,0.204154171254893,0.368502951935304,0.413303124703062,3.56400857184616,2.22540236350701,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,1.22595118319608,0.600952235626387,0.113432183160021,0,0.640672166455702,0.423863802319124,0.900273288253207,0.412210116953756,0.772921620136887,0.558350568994769,0.337552664482532,0.389748020644795,0.504867548488229,0.552299391853796,0.646584227275248,1.06502877754984,1.0075209822764,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.69716365721711,0.10366105501537,0.504641701751257,1.45990943630332,0,1.92972281457866,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,1.32438929824395,0.245976877086227,0.514703430895577,0,0,0,0.0925884451585296,0.325808305310325,0,2.88662684050547,4.40535538905292,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.448524337381443,0,0.51336800074665,0.129271715757778,0,0,1.59562869950922,0,0,0,0,1.00084595560703,0,0,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.27047312111232,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.410635780069046,0,0,0.725156697549733,0,0,0.34444334449382,0.182091168006717,0.917870904715969,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.650756789328606,0.515205058238611,0,0,0,0,0,0,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,0.717056761020258,0.491245205065606,0.35667105148125,0,0.422215270595328,0.329294892959902,0,1.04980416073495,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0.597743964753209,0,0,0.102268682502155,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0.658156191461918,0,0,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0.311064574191741,0,0,0.313932918407225,0,0.284609546029793,0,0.694238953340524,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0.274083849293502,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,1.02956998717179,0,0.124252535565433,0,0,0,1.12198039399954,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.412079291905832,0.337017719270924,0.0984274815147488,0,0,0.136203406111576,0.803765742325096,1.2378549293751,1.24632101408756,0,0,0.121499113316049,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0.511164065356265,0,0.146552233678082,1.32506888912221,0,0,0.342173675768659,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.686520205190771,0.151230923763239,0.466311601748341,0.295710299979268,0,1.79921244865442,0.310525913752519,0,0,0,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0.928067519756987,0.796191777397232,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0.5219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| ||
|short_description=p7@PVRL3 | |||
}} | }} |
Latest revision as of 12:21, 19 September 2015
Short description: | p7@PVRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PVRL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000493615, NM_001243288, uc003dxu.1_5end |
EntrezGene: | PVRL3 |
HGNC: | 17664 |
UniProt: | E9PFR0Q8NC05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.95e-20 | 3 |
ciliated epithelial cell | 3.95e-20 | 3 |
multi-ciliated epithelial cell | 3.95e-20 | 3 |
non-pigmented ciliary epithelial cell | 3.95e-20 | 3 |
crystallin accumulating cell | 6.58e-15 | 4 |
vertebrate lens cell | 6.58e-15 | 4 |
lens epithelial cell | 6.58e-15 | 4 |
neuronal stem cell | 2.41e-12 | 8 |
neuron | 1.11e-09 | 6 |
neuroblast | 1.11e-09 | 6 |
electrically signaling cell | 1.11e-09 | 6 |
columnar/cuboidal epithelial cell | 5.21e-08 | 27 |
neurectodermal cell | 9.16e-07 | 59 |