FFCP PHASE1:Hg19::chr2:20425294..20425305,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6382 | |EntrezGene=6382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10658 | |HGNC=10658 | ||
|TSSclassifier=strong | |||
|UniProt=P18827 | |UniProt=P18827 | ||
|association_with_transcript=-100bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | |association_with_transcript=-100bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | ||
|cluster_id=chr2:20425294..20425305,- | |||
|description=CAGE_peak_12_at_SDC1_5end | |description=CAGE_peak_12_at_SDC1_5end | ||
|id=chr2:20425294..20425305,- | |id=chr2:20425294..20425305,- | ||
|ontology_enrichment_celltype=CL:0000066!9.71e-18!254;CL:0002076!3.58e-16!43;CL:0000223!2.06e-15!59;CL:0002368!2.73e-07!13;CL:0002251!2.82e-07!21 | |ontology_enrichment_celltype=CL:0000066!9.71e-18!254;CL:0002076!3.58e-16!43;CL:0000223!2.06e-15!59;CL:0002368!2.73e-07!13;CL:0002251!2.82e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000575;6.10e-23;2!CL:0002623;1.22e-15;3!CL:0002591;2.32e-12;1!CL:0000622;9.27e-10;5!CL:0000154;2.81e-08;6!CL:0002076;1.03e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,5.47e-23,2;CL:0002623,1.32e-15,3;CL:0002591,3.08e-12,1;CL:0000622,9.70e-10,5;CL:0002076,4.47e-09,42;CL:0000223,1.03e-08,58;CL:0000154,2.91e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.34e-13;1!UBERON:0009143;2.32e-12;1!CL:0000223;9.31e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.93e-08!106 | |ontology_enrichment_disease=DOID:305!1.93e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:0050619;8.34e-13;1!DOID:1357;8.34e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.03e-13,1;DOID:1357,7.03e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.80e-20!169;UBERON:0000925!3.80e-20!169;UBERON:0006595!3.80e-20!169;UBERON:0001004!8.27e-15!72;UBERON:0001007!3.51e-14!155;UBERON:0001555!3.51e-14!155;UBERON:0007026!3.51e-14!155;UBERON:0005911!4.09e-13!82;UBERON:0000161!1.48e-12!35;UBERON:0000077!2.39e-12!130;UBERON:0003102!4.55e-11!95;UBERON:0005153!3.54e-10!37;UBERON:0006554!1.04e-09!44;UBERON:0004921!1.25e-09!129;UBERON:0004185!1.25e-09!129;UBERON:0001008!2.42e-09!45;UBERON:0000065!5.03e-09!53;UBERON:0000166!7.07e-09!21;UBERON:0003929!1.04e-08!54;UBERON:0005157!1.46e-08!51;UBERON:0000466!1.66e-08!126;UBERON:0000475!2.29e-08!365;UBERON:0001041!6.00e-08!98;UBERON:0000165!6.99e-08!28;UBERON:0000930!6.99e-08!28;UBERON:0005177!1.57e-07!107;UBERON:0002530!4.32e-07!59;UBERON:0000062!5.60e-07!511;UBERON:0000464!6.67e-07!104;UBERON:0003104!7.33e-07!238;UBERON:0009142!7.33e-07!238 | |ontology_enrichment_uberon=UBERON:0004119!3.80e-20!169;UBERON:0000925!3.80e-20!169;UBERON:0006595!3.80e-20!169;UBERON:0001004!8.27e-15!72;UBERON:0001007!3.51e-14!155;UBERON:0001555!3.51e-14!155;UBERON:0007026!3.51e-14!155;UBERON:0005911!4.09e-13!82;UBERON:0000161!1.48e-12!35;UBERON:0000077!2.39e-12!130;UBERON:0003102!4.55e-11!95;UBERON:0005153!3.54e-10!37;UBERON:0006554!1.04e-09!44;UBERON:0004921!1.25e-09!129;UBERON:0004185!1.25e-09!129;UBERON:0001008!2.42e-09!45;UBERON:0000065!5.03e-09!53;UBERON:0000166!7.07e-09!21;UBERON:0003929!1.04e-08!54;UBERON:0005157!1.46e-08!51;UBERON:0000466!1.66e-08!126;UBERON:0000475!2.29e-08!365;UBERON:0001041!6.00e-08!98;UBERON:0000165!6.99e-08!28;UBERON:0000930!6.99e-08!28;UBERON:0005177!1.57e-07!107;UBERON:0002530!4.32e-07!59;UBERON:0000062!5.60e-07!511;UBERON:0000464!6.67e-07!104;UBERON:0003104!7.33e-07!238;UBERON:0009142!7.33e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;8.34e-13;1!UBERON:0001825;8.34e-13;1!UBERON:0000964;5.69e-12;4!UBERON:0010409;5.69e-12;4!UBERON:0010313;1.69e-10;10!UBERON:0001044;2.81e-08;6!UBERON:0003293;2.81e-08;6!UBERON:0003294;2.81e-08;6!UBERON:0010047;2.81e-08;6!UBERON:0003408;2.81e-08;6!UBERON:0000167;2.81e-08;6!UBERON:0001041;1.20e-07;14!UBERON:0000078;8.28e-07;2!UBERON:0002012;8.28e-07;2!UBERON:0008886;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,7.03e-13,1;UBERON:0001825,7.03e-13,1;UBERON:0000964,5.40e-12,4;UBERON:0010409,5.40e-12,4;UBERON:0004348,5.40e-12,4;UBERON:0005427,5.40e-12,4;UBERON:0010313,1.78e-10,10;UBERON:0002342,1.78e-10,10;UBERON:0005062,1.78e-10,10;UBERON:0000033,4.94e-09,56;UBERON:0001044,2.91e-08,6;UBERON:0003293,2.91e-08,6;UBERON:0003294,2.91e-08,6;UBERON:0010047,2.91e-08,6;UBERON:0000167,2.91e-08,6;UBERON:0000153,4.29e-08,62;UBERON:0007811,4.29e-08,62;UBERON:0005157,4.38e-08,47;UBERON:0003102,6.70e-08,99;UBERON:0004119,8.81e-07,160;UBERON:0000925,8.81e-07,160;UBERON:0006595,8.81e-07,160;UBERON:0000078,9.54e-07,2;UBERON:0007497,9.54e-07,2;UBERON:0003643,9.54e-07,2;UBERON:0003504,9.54e-07,2;UBERON:0003469,9.54e-07,2;UBERON:0003496,9.54e-07,2;UBERON:0002012,9.54e-07,2;UBERON:0008886,9.54e-07,2;UBERON:0007303,9.54e-07,2;UBERON:0002061,9.54e-07,2;UBERON:0005432,9.54e-07,2;UBERON:0004363,9.54e-07,2 | |||
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| ||
|short_description=p12@SDC1 | |short_description=p12@SDC1 | ||
}} | }} |
Latest revision as of 15:44, 19 September 2015
Short description: | p12@SDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000381150, NM_001006946, uc002rdp.1_5end |
EntrezGene: | SDC1 |
HGNC: | 10658 |
UniProt: | P18827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.47e-23 | 2 |
acinar cell of salivary gland | 1.32e-15 | 3 |
smooth muscle cell of the pulmonary artery | 3.08e-12 | 1 |
acinar cell | 9.70e-10 | 5 |
endo-epithelial cell | 4.47e-09 | 42 |
endodermal cell | 1.03e-08 | 58 |
protein secreting cell | 2.91e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.03e-13 | 1 |
maxillary sinus cancer | 7.03e-13 | 1 |