FFCP PHASE1:Hg19::chr3:113415441..113415500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=205717 | |EntrezGene=205717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30494 | |HGNC=30494 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DE3,C9JBW0 | |UniProt=Q68DE3,C9JBW0 | ||
|association_with_transcript=0bp_to_ENST00000316407,ENST00000491165,NM_001009899,uc003eam.2_5end | |association_with_transcript=0bp_to_ENST00000316407,ENST00000491165,NM_001009899,uc003eam.2_5end | ||
|cluster_id=chr3:113415441..113415500,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_KIAA2018_5end | |description=CAGE_peak_1_at_KIAA2018_5end | ||
|id=chr3:113415441..113415500,- | |id=chr3:113415441..113415500,- | ||
|ontology_enrichment_celltype=CL:0000738!1.94e-23!140;CL:0000037!5.06e-22!172;CL:0000566!5.06e-22!172;CL:0002032!9.81e-20!165;CL:0000837!9.81e-20!165;CL:0000988!7.29e-19!182;CL:0002087!2.28e-17!119;CL:0002031!3.57e-16!124;CL:0002057!2.04e-11!42;CL:0000766!5.96e-11!76;CL:0000542!1.87e-10!53;CL:0000051!1.87e-10!53;CL:0000838!3.33e-10!52;CL:0000763!5.50e-10!112;CL:0000049!5.50e-10!112;CL:0000860!1.24e-09!45;CL:0000557!2.46e-08!71;CL:0002009!2.81e-07!65;CL:0002194!9.54e-07!63;CL:0000576!9.54e-07!63;CL:0000040!9.54e-07!63;CL:0000559!9.54e-07!63 | |ontology_enrichment_celltype=CL:0000738!1.94e-23!140;CL:0000037!5.06e-22!172;CL:0000566!5.06e-22!172;CL:0002032!9.81e-20!165;CL:0000837!9.81e-20!165;CL:0000988!7.29e-19!182;CL:0002087!2.28e-17!119;CL:0002031!3.57e-16!124;CL:0002057!2.04e-11!42;CL:0000766!5.96e-11!76;CL:0000542!1.87e-10!53;CL:0000051!1.87e-10!53;CL:0000838!3.33e-10!52;CL:0000763!5.50e-10!112;CL:0000049!5.50e-10!112;CL:0000860!1.24e-09!45;CL:0000557!2.46e-08!71;CL:0002009!2.81e-07!65;CL:0002194!9.54e-07!63;CL:0000576!9.54e-07!63;CL:0000040!9.54e-07!63;CL:0000559!9.54e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-09;33!CL:0002057;1.22e-09;33!CL:0002087;2.43e-07;104!CL:0000236;3.40e-07;13!CL:0000576;4.29e-07;48!CL:0000542;4.82e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.01e-25,136;CL:0000037,3.01e-23,168;CL:0002032,6.65e-21,161;CL:0000837,6.65e-21,161;CL:0000988,1.94e-20,177;CL:0002087,9.78e-19,115;CL:0002031,2.06e-17,120;CL:0000766,2.73e-12,72;CL:0000860,2.03e-11,42;CL:0002057,2.03e-11,42;CL:0000763,6.38e-11,108;CL:0000049,6.38e-11,108;CL:0000542,1.87e-10,53;CL:0000051,1.87e-10,53;CL:0000838,3.32e-10,52;CL:0000557,1.78e-09,67;CL:0000473,1.09e-08,48;CL:0000234,1.09e-08,48;CL:0002009,2.27e-08,61;CL:0002194,8.48e-08,59;CL:0000576,8.48e-08,59;CL:0000040,8.48e-08,59;CL:0000559,8.48e-08,59;CL:0000839,1.46e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-08;42!CL:0000051;4.82e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.30e-21!115;UBERON:0002390!7.18e-10!102;UBERON:0003061!7.18e-10!102;UBERON:0002193!5.55e-08!112;UBERON:0002405!2.26e-07!115;UBERON:0001474!2.89e-07!86;UBERON:0002371!4.37e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-20,114;UBERON:0002390,7.08e-11,98;UBERON:0003061,7.08e-11,98;UBERON:0002193,8.64e-09,108;UBERON:0001474,3.66e-08,82;UBERON:0002371,5.20e-08,76;UBERON:0002405,4.55e-07,93 | |||
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| ||
|short_description=p1@KIAA2018 | |short_description=p1@KIAA2018 | ||
}} | }} |
Latest revision as of 15:56, 19 September 2015
Short description: | p1@KIAA2018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA2018_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000316407, ENST00000491165, NM_001009899, uc003eam.2_5end |
EntrezGene: | KIAA2018 |
HGNC: | 30494 |
UniProt: | Q68DE3C9JBW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.01e-25 | 136 |
hematopoietic stem cell | 3.01e-23 | 168 |
hematopoietic oligopotent progenitor cell | 6.65e-21 | 161 |
hematopoietic multipotent progenitor cell | 6.65e-21 | 161 |
hematopoietic cell | 1.94e-20 | 177 |
nongranular leukocyte | 9.78e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 2.06e-17 | 120 |
myeloid leukocyte | 2.73e-12 | 72 |
classical monocyte | 2.03e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-11 | 42 |
myeloid cell | 6.38e-11 | 108 |
common myeloid progenitor | 6.38e-11 | 108 |
lymphocyte | 1.87e-10 | 53 |
common lymphoid progenitor | 1.87e-10 | 53 |
lymphoid lineage restricted progenitor cell | 3.32e-10 | 52 |
granulocyte monocyte progenitor cell | 1.78e-09 | 67 |
defensive cell | 1.09e-08 | 48 |
phagocyte | 1.09e-08 | 48 |
macrophage dendritic cell progenitor | 2.27e-08 | 61 |
monopoietic cell | 8.48e-08 | 59 |
monocyte | 8.48e-08 | 59 |
monoblast | 8.48e-08 | 59 |
promonocyte | 8.48e-08 | 59 |
myeloid lineage restricted progenitor cell | 1.46e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-20 | 114 |
hematopoietic system | 7.08e-11 | 98 |
blood island | 7.08e-11 | 98 |
hemolymphoid system | 8.64e-09 | 108 |
bone element | 3.66e-08 | 82 |
bone marrow | 5.20e-08 | 76 |
immune system | 4.55e-07 | 93 |