FFCP PHASE1:Hg19::chr18:47087113..47087125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9388 | |EntrezGene=9388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6623 | |HGNC=6623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_AK125344_5end | |association_with_transcript=44bp_to_AK125344_5end | ||
|cluster_id=chr18:47087113..47087125,+ | |||
|description=CAGE_peak_6_at_LIPG_5end | |description=CAGE_peak_6_at_LIPG_5end | ||
|id=chr18:47087113..47087125,+ | |id=chr18:47087113..47087125,+ | ||
|ontology_enrichment_celltype=CL:1000507!5.79e-12!12;CL:1000494!5.79e-12!12;CL:1000449!1.43e-08!16;CL:0002139!4.17e-08!24;CL:1000497!1.91e-07!18;CL:0002518!1.91e-07!18;CL:0000071!2.13e-07!18;CL:0002546!2.13e-07!18 | |ontology_enrichment_celltype=CL:1000507!5.79e-12!12;CL:1000494!5.79e-12!12;CL:1000449!1.43e-08!16;CL:0002139!4.17e-08!24;CL:1000497!1.91e-07!18;CL:0002518!1.91e-07!18;CL:0000071!2.13e-07!18;CL:0002546!2.13e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;9.69e-23;10!CL:1000494;9.69e-23;10!CL:1000449;1.99e-15;15!CL:1000497;1.06e-13;17!CL:0002518;1.06e-13;17!CL:0002545;1.29e-13;2!CL:0000239;1.60e-09;3!CL:1000615;1.60e-09;3!CL:0002306;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.08e-22,10;CL:1000494,1.08e-22,10;CL:1000449,2.14e-15,15;CL:0002545,1.07e-13,2;CL:1000497,1.13e-13,17;CL:0002518,1.13e-13,17;CL:0000239,1.67e-09,3;CL:1000615,1.67e-09,3;CL:0002306,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.14e-50;2!UBERON:0005754;2.16e-26;1!UBERON:0003918;5.15e-11;10!UBERON:0007687;5.15e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.09e-12!27;UBERON:0003918!1.09e-12!27;UBERON:0005095!1.09e-12!27;UBERON:0007687!1.09e-12!27;UBERON:0005172!3.49e-12!55;UBERON:0005173!3.49e-12!55;UBERON:0000080!5.15e-12!18;UBERON:0002120!5.15e-12!18;UBERON:0004875!5.15e-12!18;UBERON:0005721!5.15e-12!18;UBERON:0005754!5.15e-12!18;UBERON:0007297!5.15e-12!18;UBERON:0009773!5.79e-12!12;UBERON:0001231!5.79e-12!12;UBERON:0004810!5.79e-12!12;UBERON:0003914!9.46e-12!118;UBERON:0000058!4.00e-11!26;UBERON:0004876!1.41e-10!20;UBERON:0002417!1.84e-10!61;UBERON:0000916!1.84e-10!61;UBERON:0006555!3.00e-10!17;UBERON:0005103!3.00e-10!17;UBERON:0000083!3.00e-10!17;UBERON:0009201!3.00e-10!17;UBERON:0004819!3.00e-10!17;UBERON:0006553!3.00e-10!17;UBERON:0003074!3.00e-10!17;UBERON:0003060!3.00e-10!17;UBERON:0000489!3.50e-10!32;UBERON:0003887!5.82e-10!21;UBERON:0000025!1.04e-09!194;UBERON:0006554!5.17e-09!44;UBERON:0006947!6.43e-09!3;UBERON:0004054!6.43e-09!3;UBERON:0004111!7.01e-09!241;UBERON:0001008!9.95e-09!45;UBERON:0004211!1.43e-08!16;UBERON:0001285!1.43e-08!16;UBERON:0007684!1.43e-08!16;UBERON:0003220!1.43e-08!16;UBERON:0004208!1.43e-08!16;UBERON:0003886!1.16e-07!63;UBERON:0001986!2.13e-07!18;UBERON:0004638!2.13e-07!18;UBERON:0004852!2.13e-07!18;UBERON:0002553!2.53e-07!70;UBERON:0002110!3.15e-07!3;UBERON:0006242!3.15e-07!3;UBERON:0000119!4.25e-07!312;UBERON:0000477!7.45e-07!286;UBERON:0000483!8.13e-07!309;UBERON:0005904!9.69e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.07e-75;3!UBERON:0004054;6.07e-75;3!UBERON:0005904;1.78e-56;4!UBERON:0000998;2.16e-26;1!UBERON:0006868;2.16e-26;1!UBERON:0001000;3.58e-26;1!UBERON:0001301;3.58e-26;1!UBERON:0005352;3.58e-26;1!UBERON:0000058;3.80e-23;10!UBERON:0004211;9.69e-23;10!UBERON:0009773;9.69e-23;10!UBERON:0001231;9.69e-23;10!UBERON:0004810;9.69e-23;10!UBERON:0003135;4.06e-21;11!UBERON:0002113;7.13e-17;24!UBERON:0011143;7.13e-17;24!UBERON:0006555;1.99e-15;15!UBERON:0004819;1.99e-15;15!UBERON:0001285;1.99e-15;15!UBERON:0007684;1.99e-15;15!UBERON:0000489;4.72e-14;29!UBERON:0005800;1.29e-13;2!UBERON:0001515;1.29e-13;2!UBERON:0006554;1.34e-13;30!UBERON:0001008;1.34e-13;30!UBERON:0004175;2.03e-11;21!UBERON:0003101;6.26e-11;22!UBERON:0000079;6.26e-11;22!UBERON:0006853;1.60e-09;3!UBERON:0007685;1.60e-09;3!UBERON:0004134;1.60e-09;3!UBERON:0005172;6.09e-08;52!UBERON:0005173;6.09e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.72e-75,3;UBERON:0004054,4.72e-75,3;UBERON:0005904,1.48e-56,4;UBERON:0002113,3.26e-34,26;UBERON:0003918,3.26e-34,26;UBERON:0011143,3.26e-34,26;UBERON:0005095,3.26e-34,26;UBERON:0007687,3.26e-34,26;UBERON:0000489,9.51e-29,31;UBERON:0000998,2.16e-26,1;UBERON:0006868,2.16e-26,1;UBERON:0001301,2.78e-26,1;UBERON:0001000,3.58e-26,1;UBERON:0005352,3.58e-26,1;UBERON:0006555,5.21e-25,16;UBERON:0004819,5.21e-25,16;UBERON:0004810,1.08e-22,10;UBERON:0003135,3.79e-21,11;UBERON:0006554,4.74e-19,47;UBERON:0001008,1.17e-18,48;UBERON:0005172,1.32e-16,54;UBERON:0005173,1.32e-16,54;UBERON:0004211,2.14e-15,15;UBERON:0009773,2.14e-15,15;UBERON:0001231,2.14e-15,15;UBERON:0001285,2.14e-15,15;UBERON:0007684,2.14e-15,15;UBERON:0004208,2.14e-15,15;UBERON:0002417,5.79e-15,60;UBERON:0000916,5.79e-15,60;UBERON:0005800,1.07e-13,2;UBERON:0001515,1.07e-13,2;UBERON:0003103,3.21e-13,68;UBERON:0000058,1.45e-12,19;UBERON:0000080,3.74e-12,9;UBERON:0002120,3.74e-12,9;UBERON:0004875,3.74e-12,9;UBERON:0005721,3.74e-12,9;UBERON:0005754,3.74e-12,9;UBERON:0007297,3.74e-12,9;UBERON:0003101,6.05e-11,22;UBERON:0000079,6.05e-11,22;UBERON:0009569,7.53e-11,112;UBERON:0004876,4.03e-10,11;UBERON:0004175,1.04e-09,25;UBERON:0006853,1.67e-09,3;UBERON:0007685,1.67e-09,3;UBERON:0004134,1.67e-09,3;UBERON:0003887,2.35e-09,12;UBERON:0005177,6.32e-09,101 | |||
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| ||
|short_description=p6@LIPG | |short_description=p6@LIPG | ||
}} | }} |
Latest revision as of 17:38, 19 September 2015
Short description: | p6@LIPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LIPG_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_AK125344_5end |
EntrezGene: | LIPG |
HGNC: | 6623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.08e-22 | 10 |
nephron tubule epithelial cell | 1.08e-22 | 10 |
epithelial cell of nephron | 2.14e-15 | 15 |
thoracic aorta endothelial cell | 1.07e-13 | 2 |
kidney cell | 1.13e-13 | 17 |
kidney epithelial cell | 1.13e-13 | 17 |
brush border epithelial cell | 1.67e-09 | 3 |
kidney cortex tubule cell | 1.67e-09 | 3 |
epithelial cell of proximal tubule | 1.67e-09 | 3 |