FFCP PHASE1:Hg19::chr11:67806467..67806527,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:67806467..67806527,+ to FFCP PHASE1:Hg19::chr11:67806467..67806527,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10312 | |EntrezGene=10312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11647 | |HGNC=11647 | ||
|TSSclassifier=strong | |||
|UniProt=Q13488,E9PMC5,Q6QBN8 | |UniProt=Q13488,E9PMC5,Q6QBN8 | ||
|association_with_transcript=0bp_to_ENST00000265686,ENST00000534673,uc001ond.1,uc001one.2_5end | |||
|cluster_id=chr11:67806467..67806527,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_TCIRG1_5end | |||
|id=chr11:67806467..67806527,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.08e-35!76;CL:0000738!5.97e-34!140;CL:0002087!2.30e-31!119;CL:0002194!1.13e-29!63;CL:0000576!1.13e-29!63;CL:0000040!1.13e-29!63;CL:0000559!1.13e-29!63;CL:0002320!5.20e-29!365;CL:0000557!7.40e-28!71;CL:0002031!1.16e-27!124;CL:0000839!1.24e-27!70;CL:0000048!1.69e-27!430;CL:0000134!1.85e-27!358;CL:0002009!3.99e-27!65;CL:0002057!3.26e-26!42;CL:0000723!6.28e-26!436;CL:0000037!5.24e-25!172;CL:0000566!5.24e-25!172;CL:0000988!6.24e-25!182;CL:0000034!4.10e-24!444;CL:0002371!5.16e-24!591;CL:0002032!6.86e-24!165;CL:0000837!6.86e-24!165;CL:0000860!6.65e-23!45;CL:0000219!1.08e-20!390;CL:0000763!1.35e-19!112;CL:0000049!1.35e-19!112;CL:0000144!4.69e-19!625;CL:0000003!7.76e-19!722;CL:0000063!7.91e-13!578;CL:0000012!4.87e-12!682;CL:0000548!6.13e-12!679;CL:0000004!6.13e-12!679;CL:0000255!6.13e-12!679;CL:0002393!3.48e-07!9;CL:0002397!3.48e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.64e-19;39!CL:0000234;6.64e-19;39!CL:0000860;1.09e-18;33!CL:0002057;1.09e-18;33!CL:0000576;5.01e-18;48!CL:0000766;6.30e-16;69!CL:0002087;9.64e-10;104!CL:0000738;4.87e-08;136!CL:0000763;2.11e-07;100!CL:0000219;9.94e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.96e-38,72;CL:0000738,7.78e-36,136;CL:0002087,2.20e-33,115;CL:0002194,6.02e-33,59;CL:0000576,6.02e-33,59;CL:0000040,6.02e-33,59;CL:0000559,6.02e-33,59;CL:0000557,1.13e-30,67;CL:0000839,1.83e-30,66;CL:0002320,3.76e-30,361;CL:0002009,4.29e-30,61;CL:0000473,4.63e-30,48;CL:0000234,4.63e-30,48;CL:0002031,1.93e-29,120;CL:0000134,1.41e-28,354;CL:0000048,2.62e-28,427;CL:0000723,1.04e-26,433;CL:0000988,2.03e-26,177;CL:0000037,2.58e-26,168;CL:0000860,3.24e-26,42;CL:0002057,3.24e-26,42;CL:0002032,3.40e-25,161;CL:0000837,3.40e-25,161;CL:0000034,7.40e-25,441;CL:0000219,1.25e-21,386;CL:0000763,4.12e-21,108;CL:0000049,4.12e-21,108;CL:0002393,3.47e-07,9;CL:0002397,3.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.10e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.38e-30!102;UBERON:0003061!2.38e-30!102;UBERON:0002193!4.35e-29!112;UBERON:0003081!7.39e-29!216;UBERON:0002384!4.58e-27!375;UBERON:0002371!4.00e-26!80;UBERON:0002405!2.88e-23!115;UBERON:0001474!5.90e-22!86;UBERON:0004765!4.82e-19!101;UBERON:0001434!4.82e-19!101;UBERON:0002204!6.97e-18!167;UBERON:0000926!5.09e-10!448;UBERON:0004120!5.09e-10!448;UBERON:0006603!5.09e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.35e-32,98;UBERON:0003061,1.35e-32,98;UBERON:0002193,4.15e-31,108;UBERON:0003081,3.24e-29,203;UBERON:0002371,1.48e-28,76;UBERON:0002384,3.60e-28,371;UBERON:0002405,3.15e-27,93;UBERON:0001474,5.59e-24,82;UBERON:0004765,1.86e-23,90;UBERON:0001434,1.34e-20,100;UBERON:0002204,8.45e-19,167;UBERON:0000926,4.11e-18,315;UBERON:0004120,4.11e-18,315;UBERON:0006603,4.11e-18,315 | |||
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| ||
|short_description=p1@TCIRG1 | |||
}} | }} |
Latest revision as of 19:44, 19 September 2015
Short description: | p1@TCIRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCIRG1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000265686, ENST00000534673, uc001ond.1, uc001one.2_5end |
EntrezGene: | TCIRG1 |
HGNC: | 11647 |
UniProt: | Q13488E9PMC5Q6QBN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.96e-38 | 72 |
leukocyte | 7.78e-36 | 136 |
nongranular leukocyte | 2.20e-33 | 115 |
monopoietic cell | 6.02e-33 | 59 |
monocyte | 6.02e-33 | 59 |
monoblast | 6.02e-33 | 59 |
promonocyte | 6.02e-33 | 59 |
granulocyte monocyte progenitor cell | 1.13e-30 | 67 |
myeloid lineage restricted progenitor cell | 1.83e-30 | 66 |
connective tissue cell | 3.76e-30 | 361 |
macrophage dendritic cell progenitor | 4.29e-30 | 61 |
defensive cell | 4.63e-30 | 48 |
phagocyte | 4.63e-30 | 48 |
hematopoietic lineage restricted progenitor cell | 1.93e-29 | 120 |
mesenchymal cell | 1.41e-28 | 354 |
multi fate stem cell | 2.62e-28 | 427 |
somatic stem cell | 1.04e-26 | 433 |
hematopoietic cell | 2.03e-26 | 177 |
hematopoietic stem cell | 2.58e-26 | 168 |
classical monocyte | 3.24e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.24e-26 | 42 |
hematopoietic oligopotent progenitor cell | 3.40e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-25 | 161 |
stem cell | 7.40e-25 | 441 |
motile cell | 1.25e-21 | 386 |
myeloid cell | 4.12e-21 | 108 |
common myeloid progenitor | 4.12e-21 | 108 |
intermediate monocyte | 3.47e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.47e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.35e-32 | 98 |
blood island | 1.35e-32 | 98 |
hemolymphoid system | 4.15e-31 | 108 |
lateral plate mesoderm | 3.24e-29 | 203 |
bone marrow | 1.48e-28 | 76 |
connective tissue | 3.60e-28 | 371 |
immune system | 3.15e-27 | 93 |
bone element | 5.59e-24 | 82 |
skeletal element | 1.86e-23 | 90 |
skeletal system | 1.34e-20 | 100 |
musculoskeletal system | 8.45e-19 | 167 |
mesoderm | 4.11e-18 | 315 |
mesoderm-derived structure | 4.11e-18 | 315 |
presumptive mesoderm | 4.11e-18 | 315 |