FFCP PHASE1:Hg19::chr10:91174215..91174287,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3988 | |EntrezGene=3988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6617 | |HGNC=6617 | ||
|TSSclassifier=strong | |||
|UniProt=F8W911 | |UniProt=F8W911 | ||
|association_with_transcript=26bp_to_ENST00000354621,ENST00000371837_5end | |association_with_transcript=26bp_to_ENST00000354621,ENST00000371837_5end | ||
|cluster_id=chr10:91174215..91174287,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_LIPA_5end | |description=CAGE_peak_4_at_LIPA_5end | ||
|id=chr10:91174215..91174287,- | |id=chr10:91174215..91174287,- | ||
|ontology_enrichment_celltype=CL:0000738!7.76e-40!140;CL:0002087!3.67e-35!119;CL:0002031!6.30e-35!124;CL:0000037!3.12e-29!172;CL:0000566!3.12e-29!172;CL:0002032!4.54e-28!165;CL:0000837!4.54e-28!165;CL:0002057!9.84e-28!42;CL:0000988!4.98e-27!182;CL:0000766!2.10e-26!76;CL:0000860!2.85e-24!45;CL:0000839!1.59e-21!70;CL:0002194!4.69e-20!63;CL:0000576!4.69e-20!63;CL:0000040!4.69e-20!63;CL:0000559!4.69e-20!63;CL:0000557!4.73e-20!71;CL:0002009!2.05e-19!65;CL:0000763!1.58e-14!112;CL:0000049!1.58e-14!112;CL:0000542!1.50e-13!53;CL:0000051!1.50e-13!53;CL:0000838!1.51e-13!52;CL:0000791!1.86e-09!18;CL:0000789!1.86e-09!18;CL:0002420!1.86e-09!18;CL:0002419!1.86e-09!18;CL:0000790!1.86e-09!18;CL:0000084!3.46e-07!25;CL:0000827!3.46e-07!25;CL:0000094!8.20e-07!8 | |ontology_enrichment_celltype=CL:0000738!7.76e-40!140;CL:0002087!3.67e-35!119;CL:0002031!6.30e-35!124;CL:0000037!3.12e-29!172;CL:0000566!3.12e-29!172;CL:0002032!4.54e-28!165;CL:0000837!4.54e-28!165;CL:0002057!9.84e-28!42;CL:0000988!4.98e-27!182;CL:0000766!2.10e-26!76;CL:0000860!2.85e-24!45;CL:0000839!1.59e-21!70;CL:0002194!4.69e-20!63;CL:0000576!4.69e-20!63;CL:0000040!4.69e-20!63;CL:0000559!4.69e-20!63;CL:0000557!4.73e-20!71;CL:0002009!2.05e-19!65;CL:0000763!1.58e-14!112;CL:0000049!1.58e-14!112;CL:0000542!1.50e-13!53;CL:0000051!1.50e-13!53;CL:0000838!1.51e-13!52;CL:0000791!1.86e-09!18;CL:0000789!1.86e-09!18;CL:0002420!1.86e-09!18;CL:0002419!1.86e-09!18;CL:0000790!1.86e-09!18;CL:0000084!3.46e-07!25;CL:0000827!3.46e-07!25;CL:0000094!8.20e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.57e-30;33!CL:0002057;3.57e-30;33!CL:0000473;9.95e-24;39!CL:0000234;9.95e-24;39!CL:0000576;2.65e-22;48!CL:0000766;7.05e-19;69!CL:0002087;6.01e-16;104!CL:0000094;6.24e-14;8!CL:0000791;1.71e-12;18!CL:0000789;1.71e-12;18!CL:0002419;1.71e-12;18!CL:0000738;2.49e-12;136!CL:0000542;5.71e-11;53!CL:0000625;2.06e-10;11!CL:0000081;1.20e-09;11!CL:0000763;2.14e-09;100!CL:0000945;1.47e-08;24!CL:0000236;1.58e-08;13!CL:0000084;4.11e-08;25!CL:0000988;1.41e-07;177!CL:0000219;2.57e-07;193!CL:0002393;7.50e-07;6!CL:0002397;7.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.97e-58,136;CL:0002087,1.33e-51,115;CL:0002031,5.28e-47,120;CL:0000037,7.91e-44,168;CL:0000860,1.93e-43,42;CL:0002057,1.93e-43,42;CL:0002032,1.41e-42,161;CL:0000837,1.41e-42,161;CL:0000473,3.48e-41,48;CL:0000234,3.48e-41,48;CL:0000988,1.87e-40,177;CL:0000766,3.15e-39,72;CL:0002194,1.62e-30,59;CL:0000576,1.62e-30,59;CL:0000040,1.62e-30,59;CL:0000559,1.62e-30,59;CL:0002009,3.79e-29,61;CL:0000839,1.17e-27,66;CL:0000557,4.50e-27,67;CL:0000763,1.32e-22,108;CL:0000049,1.32e-22,108;CL:0000838,2.94e-19,52;CL:0000542,9.87e-19,53;CL:0000051,9.87e-19,53;CL:0000094,8.67e-14,8;CL:0000134,1.98e-13,354;CL:0000791,4.85e-13,18;CL:0000789,4.85e-13,18;CL:0002420,4.85e-13,18;CL:0002419,4.85e-13,18;CL:0000790,4.85e-13,18;CL:0002320,9.41e-13,361;CL:0002393,4.33e-11,9;CL:0002397,4.33e-11,9;CL:0000219,5.82e-11,386;CL:0000625,7.36e-11,11;CL:0000236,7.40e-10,14;CL:0000081,1.51e-09,11;CL:0000034,1.55e-09,441;CL:0000048,2.02e-09,427;CL:0000723,5.33e-09,433;CL:0000945,1.01e-08,24;CL:0000826,1.01e-08,24;CL:0000084,1.78e-08,25;CL:0000827,1.78e-08,25;CL:0000775,9.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-30;42!CL:0000790;1.71e-12;18!CL:0000051;5.71e-11;53!CL:0000049;7.10e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.68e-25!102;UBERON:0003061!3.68e-25!102;UBERON:0002193!1.27e-24!112;UBERON:0002371!1.59e-18!80;UBERON:0001474!1.97e-16!86;UBERON:0002405!8.90e-14!115;UBERON:0004765!8.10e-13!101;UBERON:0001434!8.10e-13!101 | |ontology_enrichment_uberon=UBERON:0002390!3.68e-25!102;UBERON:0003061!3.68e-25!102;UBERON:0002193!1.27e-24!112;UBERON:0002371!1.59e-18!80;UBERON:0001474!1.97e-16!86;UBERON:0002405!8.90e-14!115;UBERON:0004765!8.10e-13!101;UBERON:0001434!8.10e-13!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.23e-07;15!UBERON:0000179;1.23e-07;15!UBERON:0000463;1.23e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.05e-33,98;UBERON:0003061,2.05e-33,98;UBERON:0002193,3.10e-30,108;UBERON:0002371,1.25e-25,76;UBERON:0002405,8.99e-24,93;UBERON:0001474,7.05e-23,82;UBERON:0004765,8.49e-20,90;UBERON:0001434,1.15e-16,100;UBERON:0002384,7.74e-12,371;UBERON:0003081,4.34e-11,203;UBERON:0002204,6.25e-08,167;UBERON:0000178,1.64e-07,15;UBERON:0000179,1.64e-07,15;UBERON:0000463,1.64e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0.492484232307152,0.204000691244253,0,0,0,0,1.75750833220288,0.656804715599566,1.65292640758726,2.36018566109342,1.15148819429164,1.23852898652861,0,0,0,0.0774672005803016,0,0.880801318004542,2.21598163412751,1.80490002723128,2.38711957787437,0.447830948479849,0.647787332037959,0.257575567634187,0.581592955118259,1.13362783106643,0.970336244751265,1.62700325833979,0.822335776043652,0.619412741790207,15.247696793074,10.246428261164,20.8104362301955,107.560652389825,47.1203819016193,39.2736811123591,0.564727018627814,1.91034305040492,0.898893937780338,206.300543457988,149.873855644536,149.604887436976,7.58657990429447,4.78712778291916,7.2458207590558,98.6711411337186,38.0148100543064,67.2648028915221,10.0499466102697,7.30076085788282,15.2032191293582,78.7019353423379,84.7038562771399,190.193894851972,1.69004229049553,0.637812899895131,2.51590374610051,2.2465726229299,1.20141514273205,0.964353520182481,3.13514018115373,1.19350006319454,3.10529061399878,0,1.63841583378639,2.66852776159066,0.426730222566507,1.20118796110804,4.02326707968138,1.32208974556972,1.90810750907073,1.70763890732835,1.17447437874188,2.29363936875137,5.28685314316103,39.2355994087075,0.790152254325231,0.983548850569165,1.96505381374582,1.43921049299656,1.83905144929746,0.977766799900771,1.4203434172042,0,1.78256731016278,4.12448270464772,1.77227115666897,5.1452734115353,0.896639238079726,3.12142434143708,1.31550323682941,0.829050053357545,0.289803085735052,1.92772532110679,1.60524496853828,3.1360657141493,1.24640276967323,3.44898444241729,1.71813722741315,1.77113784413652,2.54852331459277,1.95325036156926,1.90090408889675,1.6563263098555,0.76791966692651,0,1.18388626022008,1.64225599384209,4.43534835094411,1.60464117470104,2.60683926989038,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.392937226493138,0.364295288292542,0,0.324547393654683,0.522389211897802,0.132957960518865,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,38.7780264148325,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.309977343527296,1.18800285728205,0,0,1.43723628363248,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.301586917234893,0.0925884451585296,1.3032332212413,0,0,0.115930404975077,0,0.433099343283221,0,0,0.790204397959275,0,0.492434012174795,0.234004265139238,0,0,0,0.567100388969546,0.358234090811393,0,0,0.492663237895943,1.23267807618516,0.207328115540772,0.432359860250884,0.37872730027914,0.380987365753014,0,2.34434894420094,0,0.102827492703324,0,0.571652865261156,0.336393253036082,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,3.64871341923571,1.00451418286425,0,0,0,0,0,0.205476322550383,0,0.336255431980582,3.15249216323084,4.74380664690938,5.00537841491019,0,0,0,0,0,8.98808428736619,5.9832291840805,13.6757119433892,0.12269149171914,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,1.44737618286021,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0.616838775210622,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,4.62050370264133,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,1.05650146756755,0,0.141405431953713,1.13008116620243,0,1.32687795048244,0,0,0,0,0,0,0.286822704408103,0,0,0.709522128141196,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,1.52234282769651,2.29391162142713,5.69647187174163,0.714695326373367,0.411362273086194,2.59389324477087,1.08006287447623,3.17250070517708,0,0,0.245040215981032,0.185803175125719,0.28853842595289,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0.73254089635947,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0.779160935160341,0.659215496907038,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0.861593638227486,0,0.269605053441981,0.537063524026827,0,0.1972868112738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| ||
|short_description=p4@LIPA | |short_description=p4@LIPA | ||
}} | }} |
Latest revision as of 22:34, 19 September 2015
Short description: | p4@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIPA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 26bp_to_ENST00000354621, ENST00000371837_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | F8W911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.05e-33 | 98 |
blood island | 2.05e-33 | 98 |
hemolymphoid system | 3.10e-30 | 108 |
bone marrow | 1.25e-25 | 76 |
immune system | 8.99e-24 | 93 |
bone element | 7.05e-23 | 82 |
skeletal element | 8.49e-20 | 90 |
skeletal system | 1.15e-16 | 100 |
connective tissue | 7.74e-12 | 371 |
lateral plate mesoderm | 4.34e-11 | 203 |
musculoskeletal system | 6.25e-08 | 167 |
blood | 1.64e-07 | 15 |
haemolymphatic fluid | 1.64e-07 | 15 |
organism substance | 1.64e-07 | 15 |