FFCP PHASE1:Hg19::chr3:121796623..121796637,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=942 | |EntrezGene=942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1705 | |HGNC=1705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000483949_5end | |association_with_transcript=-53bp_to_ENST00000483949_5end | ||
|cluster_id=chr3:121796623..121796637,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_CD86_5end | |description=CAGE_peak_4_at_CD86_5end | ||
|id=chr3:121796623..121796637,+ | |id=chr3:121796623..121796637,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.71e-44!140;CL:0002087!3.89e-39!119;CL:0000988!2.80e-38!182;CL:0002031!1.63e-35!124;CL:0000037!2.63e-35!172;CL:0000566!2.63e-35!172;CL:0002032!7.55e-34!165;CL:0000837!7.55e-34!165;CL:0000945!2.79e-31!24;CL:0000826!2.79e-31!24;CL:0000860!7.40e-23!45;CL:0002057!2.22e-22!42;CL:0000542!7.56e-20!53;CL:0000051!7.56e-20!53;CL:0002009!1.80e-19!65;CL:0000838!3.29e-18!52;CL:0000557!2.35e-17!71;CL:0000453!4.87e-17!5;CL:0002194!2.88e-16!63;CL:0000576!2.88e-16!63;CL:0000040!2.88e-16!63;CL:0000559!2.88e-16!63;CL:0000763!7.22e-15!112;CL:0000049!7.22e-15!112;CL:0000839!3.81e-14!70;CL:0000766!4.23e-14!76;CL:0000080!5.81e-14!6;CL:0000990!6.10e-13!8;CL:0000134!1.20e-11!358;CL:0002320!3.36e-11!365;CL:0000451!1.88e-10!10;CL:0000219!1.26e-09!390;CL:0001014!4.26e-08!2;CL:0001016!4.26e-08!2;CL:0000048!9.25e-08!430;CL:0000236!1.10e-07!14;CL:0000723!1.70e-07!436;CL:0000034!3.71e-07!444 | |ontology_enrichment_celltype=CL:0000738!7.71e-44!140;CL:0002087!3.89e-39!119;CL:0000988!2.80e-38!182;CL:0002031!1.63e-35!124;CL:0000037!2.63e-35!172;CL:0000566!2.63e-35!172;CL:0002032!7.55e-34!165;CL:0000837!7.55e-34!165;CL:0000945!2.79e-31!24;CL:0000826!2.79e-31!24;CL:0000860!7.40e-23!45;CL:0002057!2.22e-22!42;CL:0000542!7.56e-20!53;CL:0000051!7.56e-20!53;CL:0002009!1.80e-19!65;CL:0000838!3.29e-18!52;CL:0000557!2.35e-17!71;CL:0000453!4.87e-17!5;CL:0002194!2.88e-16!63;CL:0000576!2.88e-16!63;CL:0000040!2.88e-16!63;CL:0000559!2.88e-16!63;CL:0000763!7.22e-15!112;CL:0000049!7.22e-15!112;CL:0000839!3.81e-14!70;CL:0000766!4.23e-14!76;CL:0000080!5.81e-14!6;CL:0000990!6.10e-13!8;CL:0000134!1.20e-11!358;CL:0002320!3.36e-11!365;CL:0000451!1.88e-10!10;CL:0000219!1.26e-09!390;CL:0001014!4.26e-08!2;CL:0001016!4.26e-08!2;CL:0000048!9.25e-08!430;CL:0000236!1.10e-07!14;CL:0000723!1.70e-07!436;CL:0000034!3.71e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.17e-24;5!CL:0001014;1.04e-16;2!CL:0001016;1.04e-16;2!CL:0000945;6.49e-15;24!CL:0000990;8.17e-14;8!CL:0000860;1.53e-12;33!CL:0002057;1.53e-12;33!CL:0000451;2.45e-11;10!CL:0002087;5.34e-10;104!CL:0000738;4.43e-09;136!CL:0000946;8.82e-09;1!CL:0000786;8.82e-09;1!CL:0000473;2.15e-08;39!CL:0000234;2.15e-08;39!CL:0000542;2.05e-07;53!CL:0000988;3.22e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.06e-24,5;CL:0000738,2.84e-23,136;CL:0000988,3.87e-23,177;CL:0002031,8.29e-22,120;CL:0002032,4.25e-19,161;CL:0000837,4.25e-19,161;CL:0000037,3.77e-18,168;CL:0002087,4.32e-18,115;CL:0001014,1.00e-16,2;CL:0001016,1.00e-16,2;CL:0000945,6.42e-15,24;CL:0000826,6.42e-15,24;CL:0000990,7.77e-14,8;CL:0000838,3.16e-13,52;CL:0000542,6.01e-13,53;CL:0000051,6.01e-13,53;CL:0000451,2.35e-11,10;CL:0002009,1.05e-10,61;CL:0000860,1.65e-10,42;CL:0002057,1.65e-10,42;CL:0000557,1.28e-09,67;CL:0000473,4.60e-09,48;CL:0000234,4.60e-09,48;CL:0000946,1.16e-08,1;CL:0000786,1.16e-08,1;CL:0000980,1.16e-08,1;CL:0000763,6.11e-08,108;CL:0000049,6.11e-08,108;CL:0002194,4.86e-07,59;CL:0000576,4.86e-07,59;CL:0000040,4.86e-07,59;CL:0000559,4.86e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-08;42!CL:0000051;2.05e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.11e-15!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.48e-12;10!DOID:0060060;2.04e-09;1!DOID:0060061;2.04e-09;1!DOID:8691;2.04e-09;1!DOID:630;3.72e-09;1!DOID:0050177;3.72e-09;1!DOID:0050427;3.72e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.45e-12,10;DOID:0060060,2.04e-09,1;DOID:0060061,2.04e-09,1;DOID:8691,2.04e-09,1;DOID:630,3.88e-09,1;DOID:0050177,3.88e-09,1;DOID:0050427,3.88e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-23!102;UBERON:0003061!1.67e-23!102;UBERON:0002193!3.46e-22!112;UBERON:0002371!2.33e-16!80;UBERON:0001474!8.22e-15!86;UBERON:0002405!4.51e-14!115;UBERON:0004765!9.26e-12!101;UBERON:0001434!9.26e-12!101;UBERON:0002384!1.37e-10!375;UBERON:0003081!4.39e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.57e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.67e-13,98;UBERON:0003061,9.67e-13,98;UBERON:0002193,2.45e-11,108;UBERON:0002371,2.61e-08,76;UBERON:0002405,5.63e-08,93;UBERON:0002331,7.57e-08,10;UBERON:0000358,7.57e-08,10;UBERON:0000307,7.57e-08,10;UBERON:0000091,7.57e-08,10;UBERON:0000087,7.57e-08,10;UBERON:0007010,7.57e-08,10;UBERON:0007806,7.57e-08,10;UBERON:0008780,7.57e-08,10;UBERON:0005728,7.57e-08,10;UBERON:0001474,1.36e-07,82;UBERON:0004765,8.67e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72437970581971,8.6205618922443,7.79236735005425,0.393364276848904,0,0,0,0,0,0.309868802321207,0.995184627411951,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,1.41889337933151,0.344745680736619,1.93645405075148,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,1.7412554317715,2.26954089876456,1.24564449799115,0,0,0.217188844705117,4.23779651843358,8.10210799172642,8.22802207346299,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11742430127209,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70786572014353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.1711413577261,68.2072942984696,68.9184866736006,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41239533693806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,4.27450393947851,11.6070293183692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,1.82688897571344,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,1.19578356282027,0.654261577023377,0,0,0,24.3984622943014,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89652819957081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,6.41136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72437970581971,8.6205618922443,7.79236735005425,0.393364276848904,0,0,0,0,0,0.309868802321207,0.995184627411951,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,1.41889337933151,0.344745680736619,1.93645405075148,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,1.7412554317715,2.26954089876456,1.24564449799115,0,0,0.217188844705117,4.23779651843358,8.10210799172642,8.22802207346299,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11742430127209,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70786572014353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.1711413577261,68.2072942984696,68.9184866736006,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41239533693806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,4.27450393947851,11.6070293183692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,1.82688897571344,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,1.19578356282027,0.654261577023377,0,0,0,24.3984622943014,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89652819957081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,6.41136984606466 | ||
|short_description=p4@CD86 | |short_description=p4@CD86 | ||
}} | }} |
Latest revision as of 23:13, 19 September 2015
Short description: | p4@CD86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD86_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -53bp_to_ENST00000483949_5end |
EntrezGene: | CD86 |
HGNC: | 1705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.67e-13 | 98 |
blood island | 9.67e-13 | 98 |
hemolymphoid system | 2.45e-11 | 108 |
bone marrow | 2.61e-08 | 76 |
immune system | 5.63e-08 | 93 |
umbilical cord | 7.57e-08 | 10 |
blastocyst | 7.57e-08 | 10 |
blastula | 7.57e-08 | 10 |
bilaminar disc | 7.57e-08 | 10 |
inner cell mass | 7.57e-08 | 10 |
cleaving embryo | 7.57e-08 | 10 |
connecting stalk | 7.57e-08 | 10 |
inner cell mass derived epiblast | 7.57e-08 | 10 |
extraembryonic mesoderm | 7.57e-08 | 10 |
bone element | 1.36e-07 | 82 |
skeletal element | 8.67e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.45e-12 | 10 |
non-Hodgkin lymphoma | 2.04e-09 | 1 |
cutaneous T cell lymphoma | 2.04e-09 | 1 |
mycosis fungoides | 2.04e-09 | 1 |
genetic disease | 3.88e-09 | 1 |
monogenic disease | 3.88e-09 | 1 |
xeroderma pigmentosum | 3.88e-09 | 1 |