FFCP PHASE1:Hg19::chr14:38064797..38064843,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:38064797..38064843,+ to FFCP PHASE1:Hg19::chr14:38064797..38064843,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100652860,100653093 | |EntrezGene=100652860,100653093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19739 | |HGNC=19739 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2C3 | |UniProt=G3V2C3 | ||
|association_with_transcript=-208bp_to_ENST00000556845_5end | |||
|cluster_id=chr14:38064797..38064843,+ | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_1_at_TTC6_5end | |||
|id=chr14:38064797..38064843,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.33e-18!254;CL:0000223!4.46e-11!59;CL:0000181!4.08e-09!12;CL:0000417!4.08e-09!12;CL:0000668!4.08e-09!12;CL:0000414!4.08e-09!12;CL:0000412!4.08e-09!12;CL:0000182!4.08e-09!12;CL:0000082!6.87e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.46e-17;12!CL:0000082;5.82e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.15e-17,12;CL:0000066,2.85e-09,253;CL:0000082,5.44e-07,19;CL:0000223,9.36e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.60e-29;30!UBERON:0009497;5.51e-15;13!UBERON:0004161;8.12e-14;11!UBERON:0008947;1.87e-12;29!UBERON:0009847;1.24e-10;3!UBERON:0003353;1.24e-10;3!UBERON:0006595;6.53e-10;86!UBERON:0003104;8.75e-07;31 | |||
|ontology_enrichment_disease=DOID:305!6.29e-42!106;DOID:0050687!1.28e-38!143;DOID:162!1.38e-24!235;DOID:14566!1.73e-23!239;DOID:0050615!5.85e-12!16;DOID:7!2.12e-11!39;DOID:1324!6.88e-11!15;DOID:299!5.74e-09!25;DOID:5093!6.63e-07!4;DOID:1612!6.63e-07!4;DOID:3905!6.95e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.44e-13;4!DOID:1612;1.44e-13;4!DOID:3905;1.52e-11;9!DOID:7;3.15e-11;39!DOID:0050615;6.90e-11;16!DOID:305;6.47e-10;106!DOID:1324;4.37e-09;15!DOID:5409;2.50e-07;4!DOID:1325;5.84e-07;7!DOID:3904;5.84e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.98e-22,106;DOID:0050687,1.09e-17,143;DOID:5093,1.42e-13,4;DOID:1612,1.42e-13,4;DOID:7,3.07e-13,39;DOID:3905,1.31e-11,9;DOID:0050615,5.88e-11,16;DOID:162,2.67e-10,235;DOID:14566,6.77e-10,239;DOID:1324,3.99e-09,15;DOID:5409,2.74e-07,4;DOID:1325,5.90e-07,7;DOID:3904,5.90e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.30e-29!129;UBERON:0004185!2.30e-29!129;UBERON:0001007!1.86e-25!155;UBERON:0001555!1.86e-25!155;UBERON:0007026!1.86e-25!155;UBERON:0004119!1.18e-24!169;UBERON:0000925!1.18e-24!169;UBERON:0006595!1.18e-24!169;UBERON:0000077!2.05e-22!130;UBERON:0005911!5.23e-18!82;UBERON:0001041!3.89e-17!98;UBERON:0000065!5.43e-14!53;UBERON:0005153!1.31e-12!37;UBERON:0009497!2.07e-12!25;UBERON:0000015!2.07e-12!25;UBERON:0002423!2.07e-12!25;UBERON:0006235!2.07e-12!25;UBERON:0004161!2.07e-12!25;UBERON:0008947!3.38e-12!38;UBERON:0003258!3.38e-12!38;UBERON:0009569!1.00e-11!113;UBERON:0005177!1.51e-11!107;UBERON:0001004!3.24e-11!72;UBERON:0002048!7.74e-11!22;UBERON:0000117!7.74e-11!22;UBERON:0000171!7.74e-11!22;UBERON:0000170!7.74e-11!22;UBERON:0005597!7.74e-11!22;UBERON:0000118!7.74e-11!22;UBERON:0009854!9.73e-11!23;UBERON:0003929!1.60e-10!54;UBERON:0009856!2.05e-10!26;UBERON:0005157!4.20e-10!51;UBERON:0008835!6.45e-10!22;UBERON:0003894!6.45e-10!22;UBERON:0007499!1.26e-09!25;UBERON:0000072!2.10e-09!46;UBERON:0003104!8.42e-09!238;UBERON:0009142!8.42e-09!238;UBERON:0005178!1.65e-08!34;UBERON:0002224!1.65e-08!34;UBERON:0005181!4.03e-08!35;UBERON:0000915!4.56e-08!52;UBERON:0001046!6.26e-08!19;UBERON:0004802!6.87e-08!19;UBERON:0000115!6.87e-08!19;UBERON:0002294!1.05e-07!7;UBERON:0001173!1.05e-07!7;UBERON:0004912!1.05e-07!7;UBERON:0002107!1.48e-07!19;UBERON:0006925!1.48e-07!19;UBERON:0008836!1.48e-07!19;UBERON:0002530!2.79e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.44e-16;25!UBERON:0002107;1.17e-15;19!UBERON:0006925;1.17e-15;19!UBERON:0002048;6.58e-12;22!UBERON:0000117;6.58e-12;22!UBERON:0000171;6.58e-12;22!UBERON:0000170;6.58e-12;22!UBERON:0002365;1.36e-10;31!UBERON:0002330;1.36e-10;31!UBERON:0002368;2.48e-10;33!UBERON:0000915;1.01e-08;52!UBERON:0005178;1.45e-08;34!UBERON:0002224;1.45e-08;34!UBERON:0000310;4.76e-08;10!UBERON:0005181;6.51e-08;35!UBERON:0002530;9.72e-08;57!UBERON:0001443;2.80e-07;11!UBERON:0004802;5.82e-07;19!UBERON:0000115;5.82e-07;19!UBERON:0003127;6.00e-07;2!UBERON:0000341;6.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.35e-24,118;UBERON:0005911,2.35e-23,82;UBERON:0001007,4.04e-19,145;UBERON:0001555,4.04e-19,145;UBERON:0007026,4.04e-19,145;UBERON:0009569,5.78e-19,112;UBERON:0004119,1.77e-16,160;UBERON:0000925,1.77e-16,160;UBERON:0006595,1.77e-16,160;UBERON:0007499,2.23e-16,25;UBERON:0009497,2.40e-16,25;UBERON:0000015,2.40e-16,25;UBERON:0002423,2.40e-16,25;UBERON:0006235,2.40e-16,25;UBERON:0004161,2.40e-16,25;UBERON:0001041,2.41e-16,87;UBERON:0008835,4.49e-16,22;UBERON:0003894,4.49e-16,22;UBERON:0002107,1.05e-15,19;UBERON:0006925,1.05e-15,19;UBERON:0008836,1.05e-15,19;UBERON:0009856,1.23e-15,26;UBERON:0005153,1.23e-15,37;UBERON:0009854,2.90e-15,23;UBERON:0003929,3.21e-15,54;UBERON:0005177,3.84e-14,101;UBERON:0002100,2.52e-13,199;UBERON:0000915,4.28e-13,52;UBERON:0002048,5.34e-12,22;UBERON:0000117,5.34e-12,22;UBERON:0000171,5.34e-12,22;UBERON:0000170,5.34e-12,22;UBERON:0005597,5.34e-12,22;UBERON:0000118,5.34e-12,22;UBERON:0002530,7.48e-12,59;UBERON:0005157,1.56e-11,47;UBERON:0002365,8.72e-11,31;UBERON:0002330,8.72e-11,31;UBERON:0002368,9.04e-11,35;UBERON:0011216,1.37e-10,223;UBERON:0005178,2.68e-10,34;UBERON:0002224,2.68e-10,34;UBERON:0005181,6.24e-10,35;UBERON:0008947,6.03e-09,38;UBERON:0003258,6.03e-09,38;UBERON:0005172,2.35e-08,54;UBERON:0005173,2.35e-08,54;UBERON:0000310,4.60e-08,10;UBERON:0000949,8.73e-08,45;UBERON:0001046,2.21e-07,19;UBERON:0001443,2.71e-07,11;UBERON:0002417,3.28e-07,60;UBERON:0000916,3.28e-07,60;UBERON:0004802,5.44e-07,19;UBERON:0000115,5.44e-07,19;UBERON:0003127,6.39e-07,2;UBERON:0001048,9.05e-07,160 | |||
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| ||
|short_description=p1@TTC6 | |||
}} | }} |
Latest revision as of 23:27, 19 September 2015
Short description: | p1@TTC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC6_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -208bp_to_ENST00000556845_5end |
EntrezGene: | 100652860,100653093 |
HGNC: | 19739 |
UniProt: | G3V2C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.15e-17 | 12 |
epithelial cell | 2.85e-09 | 253 |
epithelial cell of lung | 5.44e-07 | 19 |
endodermal cell | 9.36e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.98e-22 | 106 |
cell type cancer | 1.09e-17 | 143 |
thoracic cancer | 1.42e-13 | 4 |
breast cancer | 1.42e-13 | 4 |
disease of anatomical entity | 3.07e-13 | 39 |
lung carcinoma | 1.31e-11 | 9 |
respiratory system cancer | 5.88e-11 | 16 |
cancer | 2.67e-10 | 235 |
disease of cellular proliferation | 6.77e-10 | 239 |
lung cancer | 3.99e-09 | 15 |
lung small cell carcinoma | 2.74e-07 | 4 |
bronchus cancer | 5.90e-07 | 7 |
bronchogenic carcinoma | 5.90e-07 | 7 |