FFCP PHASE1:Hg19::chr18:59001014..59001026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28316 | |EntrezGene=28316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1760 | |HGNC=1760 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBT6 | |UniProt=Q9HBT6 | ||
|association_with_transcript=26bp_to_ENST00000536675,uc002lif.2_5end | |association_with_transcript=26bp_to_ENST00000536675,uc002lif.2_5end | ||
|cluster_id=chr18:59001014..59001026,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_CDH20_5end | |description=CAGE_peak_4_at_CDH20_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000342;3.20e-07;1!CL:0002565;3.20e-07;1!CL:0002581;3.20e-07;1 | |ontology_enrichment_celltype_v019=CL:0000342;3.20e-07;1!CL:0002565;3.20e-07;1!CL:0002581;3.20e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.09e-07,1;CL:0000342,6.57e-07,1;CL:0002565,6.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.98e-12;82!UBERON:0006241;2.40e-09;3!UBERON:0003057;2.40e-09;3!UBERON:0006215;8.31e-09;3!UBERON:0005425;9.86e-08;1 | |ontology_enrichment_development_v019=UBERON:0006601;1.98e-12;82!UBERON:0006241;2.40e-09;3!UBERON:0003057;2.40e-09;3!UBERON:0006215;8.31e-09;3!UBERON:0005425;9.86e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.23e-71!57;UBERON:0005068!9.23e-71!57;UBERON:0006241!9.23e-71!57;UBERON:0007135!9.23e-71!57;UBERON:0001017!2.39e-64!82;UBERON:0005743!3.02e-63!86;UBERON:0003075!4.03e-61!86;UBERON:0007284!4.03e-61!86;UBERON:0000073!6.49e-61!94;UBERON:0001016!6.49e-61!94;UBERON:0002616!8.85e-58!59;UBERON:0002346!9.24e-58!90;UBERON:0000955!3.53e-52!69;UBERON:0006238!3.53e-52!69;UBERON:0002780!4.88e-51!41;UBERON:0001890!4.88e-51!41;UBERON:0006240!4.88e-51!41;UBERON:0001893!7.10e-51!34;UBERON:0002020!1.41e-50!34;UBERON:0003528!1.41e-50!34;UBERON:0003080!1.29e-49!42;UBERON:0002791!8.75e-49!33;UBERON:0001869!1.72e-46!32;UBERON:0003056!2.93e-45!61;UBERON:0007023!3.22e-42!115;UBERON:0004121!7.38e-42!169;UBERON:0000924!1.66e-40!173;UBERON:0006601!1.66e-40!173;UBERON:0000033!1.67e-39!123;UBERON:0000153!1.22e-38!129;UBERON:0007811!1.22e-38!129;UBERON:0002619!6.47e-34!22;UBERON:0000956!1.77e-32!25;UBERON:0000203!1.77e-32!25;UBERON:0001950!1.37e-29!20;UBERON:0003076!1.94e-21!15;UBERON:0003057!1.94e-21!15;UBERON:0002308!4.98e-20!9;UBERON:0000125!4.98e-20!9;UBERON:0002420!5.71e-20!9;UBERON:0007245!5.71e-20!9;UBERON:0010009!5.71e-20!9;UBERON:0010011!5.71e-20!9;UBERON:0000454!5.71e-20!9;UBERON:0004732!2.25e-17!13;UBERON:0009663!6.25e-16!7;UBERON:0000025!2.55e-15!194;UBERON:0004733!3.44e-15!12;UBERON:0002028!3.44e-15!12;UBERON:0007277!3.44e-15!12;UBERON:0000200!1.44e-14!6;UBERON:0002298!3.25e-14!8;UBERON:0000064!7.16e-14!219;UBERON:0000119!9.47e-13!312;UBERON:0000349!2.01e-12!5;UBERON:0000483!2.49e-12!309;UBERON:0004111!5.72e-12!241;UBERON:0000475!1.14e-11!365;UBERON:0000477!4.36e-11!286;UBERON:0001871!2.65e-10!7;UBERON:0000369!1.31e-09!4;UBERON:0002435!1.31e-09!4;UBERON:0000204!1.31e-09!4;UBERON:0010082!1.31e-09!4;UBERON:0002680!2.17e-09!9;UBERON:0001895!2.17e-09!9;UBERON:0010092!2.17e-09!9;UBERON:0002240!2.38e-08!3;UBERON:0002021!4.00e-08!5;UBERON:0001896!4.21e-08!3;UBERON:0005290!4.21e-08!3;UBERON:0010096!4.21e-08!3;UBERON:0001872!4.22e-08!5;UBERON:0002771!5.33e-08!3;UBERON:0000988!5.99e-08!3;UBERON:0006331!7.73e-08!3;UBERON:0005383!2.20e-07!3;UBERON:0005382!2.20e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!9.23e-71!57;UBERON:0005068!9.23e-71!57;UBERON:0006241!9.23e-71!57;UBERON:0007135!9.23e-71!57;UBERON:0001017!2.39e-64!82;UBERON:0005743!3.02e-63!86;UBERON:0003075!4.03e-61!86;UBERON:0007284!4.03e-61!86;UBERON:0000073!6.49e-61!94;UBERON:0001016!6.49e-61!94;UBERON:0002616!8.85e-58!59;UBERON:0002346!9.24e-58!90;UBERON:0000955!3.53e-52!69;UBERON:0006238!3.53e-52!69;UBERON:0002780!4.88e-51!41;UBERON:0001890!4.88e-51!41;UBERON:0006240!4.88e-51!41;UBERON:0001893!7.10e-51!34;UBERON:0002020!1.41e-50!34;UBERON:0003528!1.41e-50!34;UBERON:0003080!1.29e-49!42;UBERON:0002791!8.75e-49!33;UBERON:0001869!1.72e-46!32;UBERON:0003056!2.93e-45!61;UBERON:0007023!3.22e-42!115;UBERON:0004121!7.38e-42!169;UBERON:0000924!1.66e-40!173;UBERON:0006601!1.66e-40!173;UBERON:0000033!1.67e-39!123;UBERON:0000153!1.22e-38!129;UBERON:0007811!1.22e-38!129;UBERON:0002619!6.47e-34!22;UBERON:0000956!1.77e-32!25;UBERON:0000203!1.77e-32!25;UBERON:0001950!1.37e-29!20;UBERON:0003076!1.94e-21!15;UBERON:0003057!1.94e-21!15;UBERON:0002308!4.98e-20!9;UBERON:0000125!4.98e-20!9;UBERON:0002420!5.71e-20!9;UBERON:0007245!5.71e-20!9;UBERON:0010009!5.71e-20!9;UBERON:0010011!5.71e-20!9;UBERON:0000454!5.71e-20!9;UBERON:0004732!2.25e-17!13;UBERON:0009663!6.25e-16!7;UBERON:0000025!2.55e-15!194;UBERON:0004733!3.44e-15!12;UBERON:0002028!3.44e-15!12;UBERON:0007277!3.44e-15!12;UBERON:0000200!1.44e-14!6;UBERON:0002298!3.25e-14!8;UBERON:0000064!7.16e-14!219;UBERON:0000119!9.47e-13!312;UBERON:0000349!2.01e-12!5;UBERON:0000483!2.49e-12!309;UBERON:0004111!5.72e-12!241;UBERON:0000475!1.14e-11!365;UBERON:0000477!4.36e-11!286;UBERON:0001871!2.65e-10!7;UBERON:0000369!1.31e-09!4;UBERON:0002435!1.31e-09!4;UBERON:0000204!1.31e-09!4;UBERON:0010082!1.31e-09!4;UBERON:0002680!2.17e-09!9;UBERON:0001895!2.17e-09!9;UBERON:0010092!2.17e-09!9;UBERON:0002240!2.38e-08!3;UBERON:0002021!4.00e-08!5;UBERON:0001896!4.21e-08!3;UBERON:0005290!4.21e-08!3;UBERON:0010096!4.21e-08!3;UBERON:0001872!4.22e-08!5;UBERON:0002771!5.33e-08!3;UBERON:0000988!5.99e-08!3;UBERON:0006331!7.73e-08!3;UBERON:0005383!2.20e-07!3;UBERON:0005382!2.20e-07!3 | ||
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|short_description=p4@CDH20 | |short_description=p4@CDH20 | ||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p4@CDH20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 26bp_to_ENST00000536675, uc002lif.2_5end |
EntrezGene: | CDH20 |
HGNC: | 1760 |
UniProt: | Q9HBT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.09e-07 | 1 |
pigment cell (sensu Vertebrata) | 6.57e-07 | 1 |
iris pigment epithelial cell | 6.57e-07 | 1 |