FFCP PHASE1:Hg19::chr18:59001014..59001026,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1760 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBT6 | |||
|association_with_transcript=26bp_to_ENST00000536675,uc002lif.2_5end | |||
|cluster_id=chr18:59001014..59001026,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_CDH20_5end | |||
|id=chr18:59001014..59001026,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000342;3.20e-07;1!CL:0002565;3.20e-07;1!CL:0002581;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.09e-07,1;CL:0000342,6.57e-07,1;CL:0002565,6.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.98e-12;82!UBERON:0006241;2.40e-09;3!UBERON:0003057;2.40e-09;3!UBERON:0006215;8.31e-09;3!UBERON:0005425;9.86e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;3.57e-44;34!UBERON:0000073;7.37e-43;53!UBERON:0002616;7.37e-43;53!UBERON:0002780;6.75e-42;41!UBERON:0001890;6.75e-42;41!UBERON:0001869;3.34e-41;32!UBERON:0002791;3.66e-41;32!UBERON:0002619;1.10e-40;22!UBERON:0003528;1.85e-39;34!UBERON:0002020;1.85e-39;34!UBERON:0000956;1.07e-35;25!UBERON:0000203;1.07e-35;25!UBERON:0001950;1.00e-31;20!UBERON:0001017;1.86e-24;75!UBERON:0000200;2.25e-24;6!UBERON:0001016;5.70e-24;83!UBERON:0004732;1.39e-21;13!UBERON:0000955;1.47e-21;68!UBERON:0001870;2.80e-18;3!UBERON:0004733;3.75e-17;12!UBERON:0002028;3.75e-17;12!UBERON:0000125;3.32e-16;9!UBERON:0002308;3.32e-16;9!UBERON:0002298;6.34e-16;6!UBERON:0005162;9.73e-14;2!UBERON:0000122;9.73e-14;2!UBERON:0009663;1.13e-13;7!UBERON:0001954;3.13e-13;2!UBERON:0003022;3.13e-13;2!UBERON:0002421;3.13e-13;2!UBERON:0002600;3.13e-13;2!UBERON:0001897;8.98e-13;2!UBERON:0002702;8.98e-13;2!UBERON:0001875;8.98e-13;2!UBERON:0006514;8.98e-13;2!UBERON:0010225;8.98e-13;2!UBERON:0007023;2.70e-12;114!UBERON:0000349;1.87e-11;5!UBERON:0001872;3.48e-11;5!UBERON:0002021;3.48e-11;5!UBERON:0002680;1.14e-10;9!UBERON:0002420;1.14e-10;9!UBERON:0007245;1.14e-10;9!UBERON:0010009;1.14e-10;9!UBERON:0001895;1.14e-10;9!UBERON:0010011;1.14e-10;9!UBERON:0000454;1.14e-10;9!UBERON:0011216;7.49e-10;132!UBERON:0002240;2.40e-09;3!UBERON:0005174;2.40e-09;3!UBERON:0001137;2.40e-09;3!UBERON:0000988;8.31e-09;3!UBERON:0001896;8.31e-09;3!UBERON:0005290;8.31e-09;3!UBERON:0000941;9.86e-08;1!UBERON:0001785;9.86e-08;1!UBERON:0002464;9.86e-08;1!UBERON:0004904;9.86e-08;1!UBERON:0001021;9.86e-08;1!UBERON:0002336;1.08e-07;1!UBERON:0011215;1.08e-07;1!UBERON:0001018;1.08e-07;1!UBERON:0002473;1.08e-07;1!UBERON:0005340;1.08e-07;1!UBERON:0003544;1.08e-07;1!UBERON:0005970;1.08e-07;1!UBERON:0002316;1.08e-07;1!UBERON:0001020;1.08e-07;1!UBERON:0002437;1.08e-07;1!UBERON:0002581;3.20e-07;1!UBERON:0002902;3.20e-07;1!UBERON:0001882;3.20e-07;1!UBERON:0002022;3.20e-07;1!UBERON:0002038;3.20e-07;1!UBERON:0009661;3.20e-07;1!UBERON:0002950;3.20e-07;1!UBERON:0009899;3.20e-07;1!UBERON:0002506;3.20e-07;1!UBERON:0007190;3.20e-07;1!UBERON:0005403;3.20e-07;1!UBERON:0001891;3.20e-07;1!UBERON:0001769;3.20e-07;1!UBERON:0010314;4.21e-07;132!UBERON:0002784;8.31e-07;4 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.34779121492523,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,1.52581736317083,1.54810963903714,0.886642856860642,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50485891499521,0,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,1.32952671507345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,1.0896272488926,0,0.137539436597234,0,0.2249738915515,0,1.15424157650247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,1.77213635993397,0.732157589411779,1.251909307065,0.573409195690071,1.88579387612649,1.30402446176905,0.830091809617385,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,0,1.27707087245721,1.64093091392604,0.252071696221718,1.38314504928436,0.645902582527404,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08060135389431,0,1.2401207790071,1.58539525484767,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,1.22345519358297,1.18390992413128,0,0,0,0.471346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.785233868459781,2.37637120261669,2.5359343655004,0,0,0.0644578879735772,0,0,0,0,0,0,1.00337708206016,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,1.44806194206653,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@CDH20 | |||
}} |
Latest revision as of 02:03, 20 September 2015
Short description: | p4@CDH20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 26bp_to_ENST00000536675, uc002lif.2_5end |
EntrezGene: | CDH20 |
HGNC: | 1760 |
UniProt: | Q9HBT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.09e-07 | 1 |
pigment cell (sensu Vertebrata) | 6.57e-07 | 1 |
iris pigment epithelial cell | 6.57e-07 | 1 |