FFCP PHASE1:Hg19::chr3:127391769..127391861,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80325 | |EntrezGene=80325 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18275 | |HGNC=18275 | ||
|TSSclassifier=strong | |||
|UniProt=Q969K4,C9JBQ0,F2Z3F5 | |UniProt=Q969K4,C9JBQ0,F2Z3F5 | ||
|association_with_transcript=0bp_to_ENST00000232744,ENST00000361019,ENST00000393363,ENST00000453791,ENST00000466612,ENST00000475042,ENST00000475265,ENST00000483857,ENST00000493365,NM_032548,NM_172027,NR_033429,uc003ejr.2,uc003ejs.2,uc003ejt.2_5end | |association_with_transcript=0bp_to_ENST00000232744,ENST00000361019,ENST00000393363,ENST00000453791,ENST00000466612,ENST00000475042,ENST00000475265,ENST00000483857,ENST00000493365,NM_032548,NM_172027,NR_033429,uc003ejr.2,uc003ejs.2,uc003ejt.2_5end | ||
|cluster_id=chr3:127391769..127391861,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ABTB1_5end | |description=CAGE_peak_1_at_ABTB1_5end | ||
|id=chr3:127391769..127391861,+ | |id=chr3:127391769..127391861,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0002057!1.78e-19!42;CL:0000766!2.05e-18!76;CL:0002087!2.30e-18!119;CL:0000860!9.40e-18!45;CL:0002031!1.23e-17!124;CL:0000839!6.54e-15!70;CL:0002194!9.97e-15!63;CL:0000576!9.97e-15!63;CL:0000040!9.97e-15!63;CL:0000559!9.97e-15!63;CL:0002009!7.21e-14!65;CL:0000557!1.19e-13!71;CL:0000037!1.51e-12!172;CL:0000566!1.51e-12!172;CL:0000988!2.08e-12!182;CL:0002032!1.52e-11!165;CL:0000837!1.52e-11!165;CL:0000791!6.93e-10!18;CL:0000789!6.93e-10!18;CL:0002420!6.93e-10!18;CL:0002419!6.93e-10!18;CL:0000790!6.93e-10!18;CL:0000763!8.05e-08!112;CL:0000049!8.05e-08!112;CL:0000625!6.18e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0002057!1.78e-19!42;CL:0000766!2.05e-18!76;CL:0002087!2.30e-18!119;CL:0000860!9.40e-18!45;CL:0002031!1.23e-17!124;CL:0000839!6.54e-15!70;CL:0002194!9.97e-15!63;CL:0000576!9.97e-15!63;CL:0000040!9.97e-15!63;CL:0000559!9.97e-15!63;CL:0002009!7.21e-14!65;CL:0000557!1.19e-13!71;CL:0000037!1.51e-12!172;CL:0000566!1.51e-12!172;CL:0000988!2.08e-12!182;CL:0002032!1.52e-11!165;CL:0000837!1.52e-11!165;CL:0000791!6.93e-10!18;CL:0000789!6.93e-10!18;CL:0002420!6.93e-10!18;CL:0002419!6.93e-10!18;CL:0000790!6.93e-10!18;CL:0000763!8.05e-08!112;CL:0000049!8.05e-08!112;CL:0000625!6.18e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-13;33!CL:0002057;2.92e-13;33!CL:0000576;1.47e-11;48!CL:0000473;6.90e-11;39!CL:0000234;6.90e-11;39!CL:0000791;6.29e-10;18!CL:0000789;6.29e-10;18!CL:0002419;6.29e-10;18!CL:0000766;1.24e-09;69!CL:0000625;5.94e-07;11!CL:0002087;7.16e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.94e-23,136;CL:0000766,1.42e-19,72;CL:0000860,1.78e-19,42;CL:0002057,1.78e-19,42;CL:0002087,4.05e-19,115;CL:0000473,7.86e-19,48;CL:0000234,7.86e-19,48;CL:0002031,2.46e-18,120;CL:0000839,6.12e-16,66;CL:0002194,7.49e-16,59;CL:0000576,7.49e-16,59;CL:0000040,7.49e-16,59;CL:0000559,7.49e-16,59;CL:0002009,6.72e-15,61;CL:0000557,1.38e-14,67;CL:0000988,4.15e-13,177;CL:0000037,6.02e-13,168;CL:0002032,6.25e-12,161;CL:0000837,6.25e-12,161;CL:0000791,6.93e-10,18;CL:0000789,6.93e-10,18;CL:0002420,6.93e-10,18;CL:0002419,6.93e-10,18;CL:0000790,6.93e-10,18;CL:0000763,3.34e-08,108;CL:0000049,3.34e-08,108;CL:0000625,6.18e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.78e-14;42!CL:0000790;6.29e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.72e-30!115;UBERON:0002390!4.11e-16!102;UBERON:0003061!4.11e-16!102;UBERON:0002193!3.89e-14!112;UBERON:0002371!1.22e-10!80;UBERON:0001049!1.57e-09!57;UBERON:0005068!1.57e-09!57;UBERON:0006241!1.57e-09!57;UBERON:0007135!1.57e-09!57;UBERON:0001474!2.63e-09!86;UBERON:0002616!1.15e-08!59;UBERON:0003080!9.45e-08!42;UBERON:0002780!1.44e-07!41;UBERON:0001890!1.44e-07!41;UBERON:0006240!1.44e-07!41;UBERON:0004765!1.92e-07!101;UBERON:0001434!1.92e-07!101;UBERON:0003081!2.65e-07!216;UBERON:0002405!2.83e-07!115;UBERON:0001893!7.91e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.14e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.59e-29,114;UBERON:0002390,6.91e-17,98;UBERON:0003061,6.91e-17,98;UBERON:0002193,9.11e-15,108;UBERON:0002371,2.67e-11,76;UBERON:0002405,9.55e-11,93;UBERON:0001474,7.50e-10,82;UBERON:0001049,2.39e-09,56;UBERON:0005068,2.39e-09,56;UBERON:0006241,2.39e-09,56;UBERON:0007135,2.39e-09,56;UBERON:0000073,3.03e-09,53;UBERON:0002616,3.03e-09,53;UBERON:0004765,4.17e-09,90;UBERON:0001434,5.42e-08,100;UBERON:0002780,1.44e-07,41;UBERON:0001890,1.44e-07,41;UBERON:0003080,1.44e-07,41;UBERON:0006240,1.44e-07,41;UBERON:0003081,1.77e-07,203;UBERON:0001893,7.91e-07,34 | |||
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| ||
|short_description=p1@ABTB1 | |short_description=p1@ABTB1 | ||
}} | }} |
Latest revision as of 05:23, 20 September 2015
Short description: | p1@ABTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABTB1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000232744, ENST00000361019, ENST00000393363, ENST00000453791, ENST00000466612, ENST00000475042, ENST00000475265, ENST00000483857, ENST00000493365, NM_032548, NM_172027, NR_033429, uc003ejr.2, uc003ejs.2, uc003ejt.2_5end |
EntrezGene: | ABTB1 |
HGNC: | 18275 |
UniProt: | Q969K4C9JBQ0F2Z3F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.94e-23 | 136 |
myeloid leukocyte | 1.42e-19 | 72 |
classical monocyte | 1.78e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-19 | 42 |
nongranular leukocyte | 4.05e-19 | 115 |
defensive cell | 7.86e-19 | 48 |
phagocyte | 7.86e-19 | 48 |
hematopoietic lineage restricted progenitor cell | 2.46e-18 | 120 |
myeloid lineage restricted progenitor cell | 6.12e-16 | 66 |
monopoietic cell | 7.49e-16 | 59 |
monocyte | 7.49e-16 | 59 |
monoblast | 7.49e-16 | 59 |
promonocyte | 7.49e-16 | 59 |
macrophage dendritic cell progenitor | 6.72e-15 | 61 |
granulocyte monocyte progenitor cell | 1.38e-14 | 67 |
hematopoietic cell | 4.15e-13 | 177 |
hematopoietic stem cell | 6.02e-13 | 168 |
hematopoietic oligopotent progenitor cell | 6.25e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.25e-12 | 161 |
mature alpha-beta T cell | 6.93e-10 | 18 |
alpha-beta T cell | 6.93e-10 | 18 |
immature T cell | 6.93e-10 | 18 |
mature T cell | 6.93e-10 | 18 |
immature alpha-beta T cell | 6.93e-10 | 18 |
myeloid cell | 3.34e-08 | 108 |
common myeloid progenitor | 3.34e-08 | 108 |
CD8-positive, alpha-beta T cell | 6.18e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.59e-29 | 114 |
hematopoietic system | 6.91e-17 | 98 |
blood island | 6.91e-17 | 98 |
hemolymphoid system | 9.11e-15 | 108 |
bone marrow | 2.67e-11 | 76 |
immune system | 9.55e-11 | 93 |
bone element | 7.50e-10 | 82 |
neural tube | 2.39e-09 | 56 |
neural rod | 2.39e-09 | 56 |
future spinal cord | 2.39e-09 | 56 |
neural keel | 2.39e-09 | 56 |
regional part of nervous system | 3.03e-09 | 53 |
regional part of brain | 3.03e-09 | 53 |
skeletal element | 4.17e-09 | 90 |
skeletal system | 5.42e-08 | 100 |
regional part of forebrain | 1.44e-07 | 41 |
forebrain | 1.44e-07 | 41 |
anterior neural tube | 1.44e-07 | 41 |
future forebrain | 1.44e-07 | 41 |
lateral plate mesoderm | 1.77e-07 | 203 |
telencephalon | 7.91e-07 | 34 |