FFCP PHASE1:Hg19::chr18:74691873..74691880,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_BC130034_5end | |association_with_transcript=71bp_to_BC130034_5end | ||
|cluster_id=chr18:74691873..74691880,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_35_at_MBP_5end | |description=CAGE_peak_35_at_MBP_5end | ||
|id=chr18:74691873..74691880,- | |id=chr18:74691873..74691880,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.37e-33;3!UBERON:0003057;5.37e-33;3!UBERON:0005425;2.63e-12;1!UBERON:0006222;5.05e-12;1!UBERON:0006601;5.53e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.11e-89!57;UBERON:0005068!5.11e-89!57;UBERON:0006241!5.11e-89!57;UBERON:0007135!5.11e-89!57;UBERON:0001017!1.49e-70!82;UBERON:0002616!2.58e-70!59;UBERON:0005743!5.48e-67!86;UBERON:0000955!1.78e-66!69;UBERON:0006238!1.78e-66!69;UBERON:0002780!2.93e-66!41;UBERON:0001890!2.93e-66!41;UBERON:0006240!2.93e-66!41;UBERON:0003080!1.41e-64!42;UBERON:0000073!9.37e-64!94;UBERON:0001016!9.37e-64!94;UBERON:0002020!2.46e-62!34;UBERON:0003528!2.46e-62!34;UBERON:0001893!3.41e-62!34;UBERON:0003075!2.71e-60!86;UBERON:0007284!2.71e-60!86;UBERON:0002791!2.07e-58!33;UBERON:0002346!2.64e-57!90;UBERON:0007023!2.47e-55!115;UBERON:0001869!2.29e-54!32;UBERON:0002619!1.63e-45!22;UBERON:0003056!6.59e-43!61;UBERON:0000956!7.74e-40!25;UBERON:0000203!7.74e-40!25;UBERON:0000033!2.65e-39!123;UBERON:0001950!3.36e-38!20;UBERON:0000153!3.79e-37!129;UBERON:0007811!3.79e-37!129;UBERON:0004121!2.08e-34!169;UBERON:0000924!1.93e-33!173;UBERON:0006601!1.93e-33!173;UBERON:0002298!3.24e-28!8;UBERON:0000200!1.91e-26!6;UBERON:0002308!1.81e-24!9;UBERON:0000125!1.81e-24!9;UBERON:0003076!3.05e-24!15;UBERON:0003057!3.05e-24!15;UBERON:0000025!4.14e-21!194;UBERON:0002420!1.34e-17!9;UBERON:0007245!1.34e-17!9;UBERON:0010009!1.34e-17!9;UBERON:0010011!1.34e-17!9;UBERON:0000454!1.34e-17!9;UBERON:0004732!4.97e-17!13;UBERON:0004111!1.09e-16!241;UBERON:0009663!3.08e-16!7;UBERON:0002240!2.13e-15!3;UBERON:0006331!3.41e-15!3;UBERON:0000988!5.44e-15!3;UBERON:0001896!1.19e-14!3;UBERON:0005290!1.19e-14!3;UBERON:0010096!1.19e-14!3;UBERON:0000349!2.89e-14!5;UBERON:0002771!6.69e-14!3;UBERON:0000477!6.74e-14!286;UBERON:0004733!1.27e-13!12;UBERON:0002028!1.27e-13!12;UBERON:0007277!1.27e-13!12;UBERON:0001871!2.09e-13!7;UBERON:0000483!3.20e-12!309;UBERON:0000119!5.00e-12!312;UBERON:0000475!1.13e-11!365;UBERON:0000064!1.16e-11!219;UBERON:0005162!8.28e-11!2;UBERON:0000122!8.28e-11!2;UBERON:0002148!1.15e-10!2;UBERON:0009662!1.15e-10!2;UBERON:0000369!1.55e-10!4;UBERON:0002435!1.55e-10!4;UBERON:0000204!1.55e-10!4;UBERON:0010082!1.55e-10!4;UBERON:0001897!4.04e-10!2;UBERON:0001954!8.33e-10!2;UBERON:0003022!8.33e-10!2;UBERON:0002421!8.33e-10!2;UBERON:0002600!8.33e-10!2;UBERON:0001870!9.12e-10!2;UBERON:0005174!2.07e-09!5;UBERON:0001137!2.07e-09!5;UBERON:0002021!6.89e-09!5;UBERON:0001872!1.45e-08!5;UBERON:0005383!8.82e-07!3;UBERON:0005382!8.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.34e-61;6!UBERON:0004732;1.20e-38;13!UBERON:0002240;5.37e-33;3!UBERON:0005174;5.37e-33;3!UBERON:0001137;5.37e-33;3!UBERON:0000988;5.64e-32;3!UBERON:0001896;1.90e-31;3!UBERON:0005290;1.90e-31;3!UBERON:0004733;1.01e-30;12!UBERON:0002028;1.01e-30;12!UBERON:0000073;5.41e-23;53!UBERON:0002616;5.41e-23;53!UBERON:0005162;2.18e-22;2!UBERON:0000122;2.18e-22;2!UBERON:0002148;3.34e-22;2!UBERON:0006331;3.34e-22;2!UBERON:0009662;3.34e-22;2!UBERON:0000125;4.02e-19;9!UBERON:0002308;4.02e-19;9!UBERON:0001017;5.60e-17;75!UBERON:0001016;6.86e-14;83!UBERON:0000941;2.63e-12;1!UBERON:0001785;2.63e-12;1!UBERON:0002464;2.63e-12;1!UBERON:0004904;2.63e-12;1!UBERON:0001021;2.63e-12;1!UBERON:0002038;4.06e-12;1!UBERON:0009661;4.06e-12;1!UBERON:0002950;4.06e-12;1!UBERON:0001891;4.06e-12;1!UBERON:0002336;7.35e-12;1!UBERON:0011215;7.35e-12;1!UBERON:0001018;7.35e-12;1!UBERON:0002473;7.35e-12;1!UBERON:0005340;7.35e-12;1!UBERON:0003544;7.35e-12;1!UBERON:0005970;7.35e-12;1!UBERON:0002316;7.35e-12;1!UBERON:0001020;7.35e-12;1!UBERON:0002437;7.35e-12;1!UBERON:0007190;1.39e-11;1!UBERON:0002780;1.76e-11;41!UBERON:0001890;1.76e-11;41!UBERON:0002680;4.38e-11;9!UBERON:0001895;4.38e-11;9!UBERON:0000955;6.48e-11;68!UBERON:0007023;1.32e-10;114!UBERON:0002021;2.36e-09;5!UBERON:0001893;2.36e-08;34!UBERON:0009663;5.42e-07;7!UBERON:0001894;6.88e-07;7!UBERON:0003714;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.94e-61,6;UBERON:0003076,2.83e-55,15;UBERON:0003057,2.83e-55,15;UBERON:0001049,1.23e-50,56;UBERON:0005068,1.23e-50,56;UBERON:0006241,1.23e-50,56;UBERON:0007135,1.23e-50,56;UBERON:0001016,1.03e-38,89;UBERON:0004732,1.47e-38,13;UBERON:0003075,1.49e-38,82;UBERON:0007284,1.49e-38,82;UBERON:0001017,2.02e-38,81;UBERON:0002346,1.11e-36,86;UBERON:0000073,1.14e-35,53;UBERON:0002616,1.14e-35,53;UBERON:0002240,5.98e-33,3;UBERON:0005174,5.98e-33,3;UBERON:0001137,5.98e-33,3;UBERON:0000988,5.08e-32,3;UBERON:0001896,3.05e-31,3;UBERON:0005290,3.05e-31,3;UBERON:0010096,3.05e-31,3;UBERON:0000955,3.10e-31,68;UBERON:0006238,3.10e-31,68;UBERON:0004733,1.22e-30,12;UBERON:0002028,1.22e-30,12;UBERON:0007277,1.22e-30,12;UBERON:0010371,5.22e-30,104;UBERON:0007023,2.12e-27,114;UBERON:0010314,3.30e-23,132;UBERON:0005162,1.66e-22,2;UBERON:0000122,1.66e-22,2;UBERON:0002148,3.53e-22,2;UBERON:0006331,3.53e-22,2;UBERON:0009662,3.53e-22,2;UBERON:0004121,2.22e-19,171;UBERON:0000924,2.22e-19,171;UBERON:0006601,2.22e-19,171;UBERON:0000125,3.84e-19,9;UBERON:0002308,3.84e-19,9;UBERON:0002780,4.78e-15,41;UBERON:0001890,4.78e-15,41;UBERON:0003080,4.78e-15,41;UBERON:0006240,4.78e-15,41;UBERON:0011216,2.76e-14,223;UBERON:0000025,2.40e-13,192;UBERON:0003056,1.37e-12,61;UBERON:0000941,2.63e-12,1;UBERON:0001785,2.63e-12,1;UBERON:0002464,2.63e-12,1;UBERON:0004904,2.63e-12,1;UBERON:0001021,2.63e-12,1;UBERON:0003902,2.63e-12,1;UBERON:0005425,2.63e-12,1;UBERON:0002038,4.06e-12,1;UBERON:0009661,4.06e-12,1;UBERON:0002950,4.06e-12,1;UBERON:0001891,4.06e-12,1;UBERON:0009616,4.06e-12,1;UBERON:0010286,4.06e-12,1;UBERON:0002336,5.62e-12,1;UBERON:0011215,5.62e-12,1;UBERON:0001018,5.62e-12,1;UBERON:0002473,5.62e-12,1;UBERON:0005340,5.62e-12,1;UBERON:0003544,5.62e-12,1;UBERON:0005970,5.62e-12,1;UBERON:0002316,5.62e-12,1;UBERON:0001020,5.62e-12,1;UBERON:0002437,5.62e-12,1;UBERON:0007190,1.81e-11,1;UBERON:0002680,4.23e-11,9;UBERON:0001895,4.23e-11,9;UBERON:0010092,4.23e-11,9;UBERON:0003528,1.67e-10,34;UBERON:0002020,1.67e-10,34;UBERON:0001893,2.02e-10,34;UBERON:0004111,3.39e-10,240;UBERON:0002021,2.36e-09,5;UBERON:0000483,1.21e-08,306;UBERON:0000119,1.55e-08,309;UBERON:0009663,5.19e-07,7;UBERON:0001894,6.78e-07,7;UBERON:0006222,6.78e-07,7;UBERON:0003714,8.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89824871816911,0,3.98249557733077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46429682005587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42988416718512,2.24795422962573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0.751145584238999,1.14681839138014,1.10929051536852,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,2.39450788585727,2.2562800066483,0,0.691572524642179,0.968853873791107,22.8431072414647,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,0.826747186004736,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,1.90315252335129,0.920818829879887,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81542335574726,7.12911360785006,5.0718687310008,0,0,0,0,0,0,0,0,0,5.3035645766037,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.75836092965222,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89824871816911,0,3.98249557733077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46429682005587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42988416718512,2.24795422962573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0.751145584238999,1.14681839138014,1.10929051536852,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,2.39450788585727,2.2562800066483,0,0.691572524642179,0.968853873791107,22.8431072414647,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,0.826747186004736,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,1.90315252335129,0.920818829879887,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,9.81542335574726,7.12911360785006,5.0718687310008,0,0,0,0,0,0,0,0,0,5.3035645766037,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.75836092965222,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p35@MBP | |short_description=p35@MBP | ||
}} | }} |
Latest revision as of 16:52, 24 September 2015
Short description: | p35@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 71bp_to_BC130034_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data