FFCP PHASE1:Hg19::chr8:101322279..101322300,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25897 | |EntrezGene=25897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13432 | |HGNC=13432 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NV58 | |UniProt=Q9NV58 | ||
|association_with_transcript=26bp_to_NM_183419,uc003yjk.1_5end | |association_with_transcript=26bp_to_NM_183419,uc003yjk.1_5end | ||
|cluster_id=chr8:101322279..101322300,- | |||
|coexpression_cluster_id=C4712 | |||
|description=CAGE_peak_4_at_RNF19A_5end | |description=CAGE_peak_4_at_RNF19A_5end | ||
|id=chr8:101322279..101322300,- | |id=chr8:101322279..101322300,- | ||
|ontology_enrichment_celltype=CL:0000738!9.86e-20!140;CL:0002031!6.21e-19!124;CL:0002087!4.95e-16!119;CL:0000037!1.38e-13!172;CL:0000566!1.38e-13!172;CL:0002032!7.58e-13!165;CL:0000837!7.58e-13!165;CL:0002057!9.88e-13!42;CL:0000860!2.39e-12!45;CL:0000766!3.16e-12!76;CL:0000988!1.84e-11!182;CL:0000557!1.27e-10!71;CL:0000839!1.38e-10!70;CL:0002009!8.47e-09!65;CL:0002194!4.76e-08!63;CL:0000576!4.76e-08!63;CL:0000040!4.76e-08!63;CL:0000559!4.76e-08!63;CL:0000838!4.78e-08!52;CL:0000542!9.72e-08!53;CL:0000051!9.72e-08!53 | |ontology_enrichment_celltype=CL:0000738!9.86e-20!140;CL:0002031!6.21e-19!124;CL:0002087!4.95e-16!119;CL:0000037!1.38e-13!172;CL:0000566!1.38e-13!172;CL:0002032!7.58e-13!165;CL:0000837!7.58e-13!165;CL:0002057!9.88e-13!42;CL:0000860!2.39e-12!45;CL:0000766!3.16e-12!76;CL:0000988!1.84e-11!182;CL:0000557!1.27e-10!71;CL:0000839!1.38e-10!70;CL:0002009!8.47e-09!65;CL:0002194!4.76e-08!63;CL:0000576!4.76e-08!63;CL:0000040!4.76e-08!63;CL:0000559!4.76e-08!63;CL:0000838!4.78e-08!52;CL:0000542!9.72e-08!53;CL:0000051!9.72e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.62e-12;33!CL:0002057;7.62e-12;33!CL:0000473;1.29e-07;39!CL:0000234;1.29e-07;39!CL:0000576;3.41e-07;48!CL:0000791;6.64e-07;18!CL:0000789;6.64e-07;18!CL:0002419;6.64e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.12e-21,136;CL:0002031,6.20e-20,120;CL:0002087,1.33e-16,115;CL:0000037,1.87e-14,168;CL:0002032,1.92e-13,161;CL:0000837,1.92e-13,161;CL:0000860,7.52e-13,42;CL:0002057,7.52e-13,42;CL:0000766,8.05e-13,72;CL:0000988,8.39e-13,177;CL:0000557,4.99e-11,67;CL:0000839,5.47e-11,66;CL:0000473,2.65e-10,48;CL:0000234,2.65e-10,48;CL:0002009,5.41e-09,61;CL:0000838,1.56e-08,52;CL:0002194,3.68e-08,59;CL:0000576,3.68e-08,59;CL:0000040,3.68e-08,59;CL:0000559,3.68e-08,59;CL:0000542,4.32e-08,53;CL:0000051,4.32e-08,53;CL:0000791,2.37e-07,18;CL:0000789,2.37e-07,18;CL:0002420,2.37e-07,18;CL:0002419,2.37e-07,18;CL:0000790,2.37e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;8.86e-10;42!CL:0000790;6.64e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.96e-24!115;UBERON:0001049!8.38e-17!57;UBERON:0005068!8.38e-17!57;UBERON:0006241!8.38e-17!57;UBERON:0007135!8.38e-17!57;UBERON:0001017!1.70e-15!82;UBERON:0005743!2.71e-14!86;UBERON:0003080!4.51e-14!42;UBERON:0002780!1.22e-13!41;UBERON:0001890!1.22e-13!41;UBERON:0006240!1.22e-13!41;UBERON:0000073!1.38e-12!94;UBERON:0001016!1.38e-12!94;UBERON:0002616!2.28e-12!59;UBERON:0000955!4.15e-12!69;UBERON:0006238!4.15e-12!69;UBERON:0002020!7.15e-12!34;UBERON:0003528!7.15e-12!34;UBERON:0002390!7.84e-12!102;UBERON:0003061!7.84e-12!102;UBERON:0002791!1.82e-11!33;UBERON:0001893!3.12e-11!34;UBERON:0002193!5.46e-11!112;UBERON:0001869!2.26e-10!32;UBERON:0002371!9.57e-09!80;UBERON:0003075!1.01e-08!86;UBERON:0007284!1.01e-08!86;UBERON:0002346!4.39e-08!90;UBERON:0000956!5.41e-08!25;UBERON:0000203!5.41e-08!25;UBERON:0001474!1.17e-07!86;UBERON:0002619!1.38e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.28e-11;41!UBERON:0001890;1.28e-11;41!UBERON:0003528;2.54e-11;34!UBERON:0002020;2.54e-11;34!UBERON:0002791;3.19e-11;32!UBERON:0001869;9.93e-11;32!UBERON:0001893;1.08e-10;34!UBERON:0000073;1.68e-10;53!UBERON:0002616;1.68e-10;53!UBERON:0000956;7.23e-09;25!UBERON:0000203;7.23e-09;25!UBERON:0002619;2.33e-08;22!UBERON:0001017;2.42e-07;75!UBERON:0007023;3.13e-07;114!UBERON:0001950;3.13e-07;20!UBERON:0000955;4.97e-07;68 | |||
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| ||
|short_description=p4@RNF19A | |short_description=p4@RNF19A | ||
}} | }} |
Latest revision as of 19:23, 24 September 2015
Short description: | p4@RNF19A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF19A_5end |
Coexpression cluster: | C4712_Mast_clear_cord_immature_lung_Reticulocytes_CD8 |
Association with transcript: | 26bp_to_NM_183419, uc003yjk.1_5end |
EntrezGene: | RNF19A |
HGNC: | 13432 |
UniProt: | Q9NV58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.12e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 6.20e-20 | 120 |
nongranular leukocyte | 1.33e-16 | 115 |
hematopoietic stem cell | 1.87e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.92e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-13 | 161 |
classical monocyte | 7.52e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.52e-13 | 42 |
myeloid leukocyte | 8.05e-13 | 72 |
hematopoietic cell | 8.39e-13 | 177 |
granulocyte monocyte progenitor cell | 4.99e-11 | 67 |
myeloid lineage restricted progenitor cell | 5.47e-11 | 66 |
defensive cell | 2.65e-10 | 48 |
phagocyte | 2.65e-10 | 48 |
macrophage dendritic cell progenitor | 5.41e-09 | 61 |
lymphoid lineage restricted progenitor cell | 1.56e-08 | 52 |
monopoietic cell | 3.68e-08 | 59 |
monocyte | 3.68e-08 | 59 |
monoblast | 3.68e-08 | 59 |
promonocyte | 3.68e-08 | 59 |
lymphocyte | 4.32e-08 | 53 |
common lymphoid progenitor | 4.32e-08 | 53 |
mature alpha-beta T cell | 2.37e-07 | 18 |
alpha-beta T cell | 2.37e-07 | 18 |
immature T cell | 2.37e-07 | 18 |
mature T cell | 2.37e-07 | 18 |
immature alpha-beta T cell | 2.37e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.22e-26 | 114 |
neural tube | 2.88e-18 | 56 |
neural rod | 2.88e-18 | 56 |
future spinal cord | 2.88e-18 | 56 |
neural keel | 2.88e-18 | 56 |
central nervous system | 2.58e-17 | 81 |
regional part of nervous system | 9.30e-17 | 53 |
regional part of brain | 9.30e-17 | 53 |
regional part of forebrain | 3.29e-15 | 41 |
forebrain | 3.29e-15 | 41 |
anterior neural tube | 3.29e-15 | 41 |
future forebrain | 3.29e-15 | 41 |
nervous system | 5.35e-15 | 89 |
brain | 1.76e-13 | 68 |
future brain | 1.76e-13 | 68 |
brain grey matter | 3.29e-13 | 34 |
gray matter | 3.29e-13 | 34 |
telencephalon | 1.74e-12 | 34 |
regional part of telencephalon | 3.28e-12 | 32 |
hematopoietic system | 5.90e-12 | 98 |
blood island | 5.90e-12 | 98 |
cerebral hemisphere | 1.63e-11 | 32 |
hemolymphoid system | 1.95e-10 | 108 |
neural plate | 4.35e-10 | 82 |
presumptive neural plate | 4.35e-10 | 82 |
immune system | 5.07e-09 | 93 |
neurectoderm | 6.00e-09 | 86 |
bone marrow | 7.66e-09 | 76 |
cerebral cortex | 7.89e-09 | 25 |
pallium | 7.89e-09 | 25 |
regional part of cerebral cortex | 2.27e-08 | 22 |
organ system subdivision | 6.05e-08 | 223 |
bone element | 6.61e-08 | 82 |
neocortex | 2.98e-07 | 20 |
pre-chordal neural plate | 7.48e-07 | 61 |